EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDORG00000011033 (Gene tree)
Gene ID: 105982544
Gene Symbol: Blm
Alias: -
Full Name: BLM RecQ like helicase
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Plus strand
Length: 53425 bases
Position: chrKN672361.1:1738275-1791699
Accession: 105982544
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000010369	HRDC	PF00570.23	7.4e-13	1	1
ENSDORP00000010369	BDHCT	PF08072.11	5.4e-13	1	1
ENSDORP00000010369	DEAD	PF00270.29	1.1e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000011032	-	4907	XM_013012191	ENSDORP00000010369	1034 (aa)	XP_012867645	A0A1S3EUP5

Gene Model

Click here to download ENSDORG00000011033's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000011033's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDORG00000011033	Blm	53	40.290	ENSDORG00000015884	Recql	83	40.290

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000011033	Blm	100	80.766	ENSG00000197299	BLM	74	80.861	Homo_sapiens
ENSDORG00000011033	Blm	100	80.993	ENSAMEG00000013843	BLM	74	80.993	Ailuropoda_melanoleuca
ENSDORG00000011033	Blm	99	55.048	ENSACIG00000023762	blm	59	63.202	Amphilophus_citrinellus
ENSDORG00000011033	Blm	99	53.695	ENSAOCG00000003318	blm	60	62.159	Amphiprion_ocellaris
ENSDORG00000011033	Blm	99	53.882	ENSAPEG00000018105	blm	59	62.159	Amphiprion_percula
ENSDORG00000011033	Blm	75	67.128	ENSATEG00000006421	blm	57	67.089	Anabas_testudineus
ENSDORG00000011033	Blm	99	60.074	ENSAPLG00000006878	BLM	90	59.522	Anas_platyrhynchos
ENSDORG00000011033	Blm	99	58.720	ENSACAG00000014275	BLM	56	70.380	Anolis_carolinensis
ENSDORG00000011033	Blm	100	81.418	ENSANAG00000038415	BLM	73	81.130	Aotus_nancymaae
ENSDORG00000011033	Blm	99	54.664	ENSACLG00000020354	blm	74	54.478	Astatotilapia_calliptera
ENSDORG00000011033	Blm	75	65.725	ENSAMXG00000016970	blm	59	62.225	Astyanax_mexicanus
ENSDORG00000011033	Blm	93	78.154	ENSBTAG00000020301	BLM	72	78.241	Bos_taurus
ENSDORG00000011033	Blm	77	36.417	WBGene00001865	him-6	66	40.569	Caenorhabditis_elegans
ENSDORG00000011033	Blm	100	80.287	ENSCJAG00000009803	BLM	74	80.574	Callithrix_jacchus
ENSDORG00000011033	Blm	100	80.287	ENSCAFG00000012385	BLM	74	80.287	Canis_familiaris
ENSDORG00000011033	Blm	100	80.191	ENSCAFG00020016111	BLM	89	89.009	Canis_lupus_dingo
ENSDORG00000011033	Blm	100	80.019	ENSCHIG00000010329	BLM	74	79.924	Capra_hircus
ENSDORG00000011033	Blm	100	80.574	ENSTSYG00000012368	BLM	74	80.478	Carlito_syrichta
ENSDORG00000011033	Blm	85	83.213	ENSCAPG00000017976	BLM	72	83.213	Cavia_aperea
ENSDORG00000011033	Blm	100	80.478	ENSCPOG00000001761	BLM	74	80.287	Cavia_porcellus
ENSDORG00000011033	Blm	100	80.861	ENSCCAG00000023069	BLM	74	80.574	Cebus_capucinus
ENSDORG00000011033	Blm	100	80.766	ENSCATG00000040609	BLM	92	88.679	Cercocebus_atys
ENSDORG00000011033	Blm	100	81.513	ENSCLAG00000012111	BLM	74	81.322	Chinchilla_lanigera
ENSDORG00000011033	Blm	100	80.670	ENSCSAG00000017040	BLM	73	80.766	Chlorocebus_sabaeus
ENSDORG00000011033	Blm	91	73.849	ENSCHOG00000006255	BLM	69	73.278	Choloepus_hoffmanni
ENSDORG00000011033	Blm	99	60.345	ENSCPBG00000025000	BLM	95	58.948	Chrysemys_picta_bellii
ENSDORG00000011033	Blm	52	37.798	ENSCSAVG00000007521	-	89	37.798	Ciona_savignyi
ENSDORG00000011033	Blm	84	69.725	ENSCANG00000034808	BLM	67	70.413	Colobus_angolensis_palliatus
ENSDORG00000011033	Blm	100	81.513	ENSCGRG00001024897	Blm	74	81.322	Cricetulus_griseus_chok1gshd
ENSDORG00000011033	Blm	55	76.592	ENSCGRG00000016261	Blm	59	76.592	Cricetulus_griseus_crigri
ENSDORG00000011033	Blm	99	54.717	ENSCSEG00000013483	blm	63	62.901	Cynoglossus_semilaevis
ENSDORG00000011033	Blm	51	64.706	ENSCVAG00000017583	blm	50	65.493	Cyprinodon_variegatus
ENSDORG00000011033	Blm	99	54.113	ENSDARG00000077089	blm	58	63.876	Danio_rerio
ENSDORG00000011033	Blm	99	77.968	ENSDNOG00000010159	BLM	74	77.968	Dasypus_novemcinctus
ENSDORG00000011033	Blm	82	39.160	FBgn0002906	Blm	53	40.971	Drosophila_melanogaster
ENSDORG00000011033	Blm	89	65.321	ENSETEG00000015019	BLM	66	64.133	Echinops_telfairi
ENSDORG00000011033	Blm	57	58.545	ENSEBUG00000015743	-	99	49.697	Eptatretus_burgeri
ENSDORG00000011033	Blm	100	78.448	ENSEASG00005006727	BLM	74	77.969	Equus_asinus_asinus
ENSDORG00000011033	Blm	100	80.795	ENSECAG00000011405	BLM	74	80.889	Equus_caballus
ENSDORG00000011033	Blm	99	77.512	ENSEEUG00000001434	BLM	75	77.512	Erinaceus_europaeus
ENSDORG00000011033	Blm	100	81.740	ENSFCAG00000006087	BLM	74	81.549	Felis_catus
ENSDORG00000011033	Blm	99	58.216	ENSFALG00000010981	BLM	67	67.750	Ficedula_albicollis
ENSDORG00000011033	Blm	100	69.532	ENSFDAG00000012658	BLM	72	68.099	Fukomys_damarensis
ENSDORG00000011033	Blm	82	61.583	ENSFHEG00000002553	blm	59	63.209	Fundulus_heteroclitus
ENSDORG00000011033	Blm	100	52.328	ENSGMOG00000016431	blm	91	60.951	Gadus_morhua
ENSDORG00000011033	Blm	79	62.349	ENSGAFG00000001117	blm	62	62.349	Gambusia_affinis
ENSDORG00000011033	Blm	99	54.554	ENSGACG00000010863	blm	100	73.194	Gasterosteus_aculeatus
ENSDORG00000011033	Blm	85	61.496	ENSGAGG00000005383	BLM	93	61.276	Gopherus_agassizii
ENSDORG00000011033	Blm	100	80.574	ENSGGOG00000007710	BLM	92	89.008	Gorilla_gorilla
ENSDORG00000011033	Blm	80	63.680	ENSHBUG00000015943	blm	75	54.664	Haplochromis_burtoni
ENSDORG00000011033	Blm	100	80.939	ENSHGLG00000013231	BLM	73	80.843	Heterocephalus_glaber_female
ENSDORG00000011033	Blm	99	55.619	ENSHCOG00000011455	blm	99	54.833	Hippocampus_comes
ENSDORG00000011033	Blm	99	55.333	ENSIPUG00000000529	blm	67	65.693	Ictalurus_punctatus
ENSDORG00000011033	Blm	100	79.522	ENSSTOG00000005000	BLM	73	79.617	Ictidomys_tridecemlineatus
ENSDORG00000011033	Blm	90	81.188	ENSJJAG00000016322	Blm	94	82.120	Jaculus_jaculus
ENSDORG00000011033	Blm	99	55.159	ENSKMAG00000016608	blm	59	63.082	Kryptolebias_marmoratus
ENSDORG00000011033	Blm	66	67.977	ENSLBEG00000018729	blm	80	67.977	Labrus_bergylta
ENSDORG00000011033	Blm	81	66.981	ENSLACG00000006490	BLM	58	66.745	Latimeria_chalumnae
ENSDORG00000011033	Blm	99	54.902	ENSLOCG00000014302	blm	61	63.333	Lepisosteus_oculatus
ENSDORG00000011033	Blm	100	80.861	ENSMFAG00000042982	BLM	92	89.218	Macaca_fascicularis
ENSDORG00000011033	Blm	100	80.957	ENSMMUG00000019526	BLM	92	89.218	Macaca_mulatta
ENSDORG00000011033	Blm	100	80.766	ENSMNEG00000031251	BLM	92	88.949	Macaca_nemestrina
ENSDORG00000011033	Blm	100	77.608	ENSMLEG00000032934	BLM	73	77.512	Mandrillus_leucophaeus
ENSDORG00000011033	Blm	80	64.466	ENSMAMG00000008726	blm	60	64.447	Mastacembelus_armatus
ENSDORG00000011033	Blm	99	54.724	ENSMZEG00005022323	blm	74	54.537	Maylandia_zebra
ENSDORG00000011033	Blm	57	66.889	ENSMGAG00000010473	BLM	99	67.391	Meleagris_gallopavo
ENSDORG00000011033	Blm	100	81.513	ENSMAUG00000008953	Blm	74	81.609	Mesocricetus_auratus
ENSDORG00000011033	Blm	100	79.828	ENSMICG00000034442	BLM	74	79.732	Microcebus_murinus
ENSDORG00000011033	Blm	100	79.942	ENSMOCG00000016367	Blm	73	79.750	Microtus_ochrogaster
ENSDORG00000011033	Blm	81	63.282	ENSMMOG00000006959	blm	60	63.002	Mola_mola
ENSDORG00000011033	Blm	99	69.316	ENSMODG00000019449	BLM	74	69.195	Monodelphis_domestica
ENSDORG00000011033	Blm	82	63.457	ENSMALG00000007323	blm	60	64.038	Monopterus_albus
ENSDORG00000011033	Blm	100	80.134	MGP_CAROLIEiJ_G0029907	Blm	73	80.326	Mus_caroli
ENSDORG00000011033	Blm	100	80.460	ENSMUSG00000030528	Blm	73	80.460	Mus_musculus
ENSDORG00000011033	Blm	100	80.537	MGP_PahariEiJ_G0013129	Blm	73	80.153	Mus_pahari
ENSDORG00000011033	Blm	100	80.345	MGP_SPRETEiJ_G0031009	Blm	73	79.981	Mus_spretus
ENSDORG00000011033	Blm	78	80.000	ENSMPUG00000015657	BLM	68	80.000	Mustela_putorius_furo
ENSDORG00000011033	Blm	100	78.373	ENSMLUG00000014697	BLM	74	78.373	Myotis_lucifugus
ENSDORG00000011033	Blm	100	81.879	ENSNGAG00000001275	Blm	74	82.167	Nannospalax_galili
ENSDORG00000011033	Blm	99	54.443	ENSNBRG00000019702	blm	74	54.911	Neolamprologus_brichardi
ENSDORG00000011033	Blm	100	78.086	ENSNLEG00000012087	BLM	100	76.504	Nomascus_leucogenys
ENSDORG00000011033	Blm	99	64.211	ENSMEUG00000007253	BLM	72	64.211	Notamacropus_eugenii
ENSDORG00000011033	Blm	91	86.226	ENSOPRG00000011667	BLM	69	85.557	Ochotona_princeps
ENSDORG00000011033	Blm	100	75.192	ENSODEG00000015373	BLM	100	75.096	Octodon_degus
ENSDORG00000011033	Blm	80	62.824	ENSONIG00000015193	blm	72	54.991	Oreochromis_niloticus
ENSDORG00000011033	Blm	74	80.804	ENSOANG00000009316	-	99	80.545	Ornithorhynchus_anatinus
ENSDORG00000011033	Blm	99	79.693	ENSOCUG00000013969	BLM	73	79.502	Oryctolagus_cuniculus
ENSDORG00000011033	Blm	99	55.441	ENSORLG00020004812	blm	60	63.432	Oryzias_latipes_hni
ENSDORG00000011033	Blm	99	55.787	ENSORLG00015018640	blm	99	55.725	Oryzias_latipes_hsok
ENSDORG00000011033	Blm	80	63.057	ENSOMEG00000023545	blm	59	62.932	Oryzias_melastigma
ENSDORG00000011033	Blm	100	76.938	ENSOGAG00000005708	BLM	74	76.989	Otolemur_garnettii
ENSDORG00000011033	Blm	100	79.226	ENSOARG00000012875	BLM	74	79.131	Ovis_aries
ENSDORG00000011033	Blm	100	80.478	ENSPPAG00000032173	BLM	74	80.574	Pan_paniscus
ENSDORG00000011033	Blm	100	81.836	ENSPPRG00000002471	BLM	74	81.644	Panthera_pardus
ENSDORG00000011033	Blm	100	80.916	ENSPTIG00000016168	BLM	74	80.725	Panthera_tigris_altaica
ENSDORG00000011033	Blm	100	80.191	ENSPTRG00000007460	BLM	74	80.287	Pan_troglodytes
ENSDORG00000011033	Blm	100	80.766	ENSPANG00000018572	BLM	92	88.949	Papio_anubis
ENSDORG00000011033	Blm	81	63.775	ENSPKIG00000008954	blm	59	63.239	Paramormyrops_kingsleyae
ENSDORG00000011033	Blm	54	77.917	ENSPSIG00000009792	BLM	99	77.917	Pelodiscus_sinensis
ENSDORG00000011033	Blm	70	66.759	ENSPMGG00000006629	blm	73	70.624	Periophthalmus_magnuspinnatus
ENSDORG00000011033	Blm	100	81.322	ENSPEMG00000017348	Blm	74	81.034	Peromyscus_maniculatus_bairdii
ENSDORG00000011033	Blm	68	59.270	ENSPMAG00000000445	blm	96	59.410	Petromyzon_marinus
ENSDORG00000011033	Blm	99	68.056	ENSPCIG00000006609	BLM	74	67.963	Phascolarctos_cinereus
ENSDORG00000011033	Blm	79	62.470	ENSPFOG00000005059	blm	59	62.349	Poecilia_formosa
ENSDORG00000011033	Blm	79	62.470	ENSPLAG00000017344	blm	59	62.349	Poecilia_latipinna
ENSDORG00000011033	Blm	79	62.470	ENSPMEG00000000321	blm	59	62.349	Poecilia_mexicana
ENSDORG00000011033	Blm	79	62.107	ENSPREG00000007715	blm	59	61.985	Poecilia_reticulata
ENSDORG00000011033	Blm	100	79.043	ENSPPYG00000006784	BLM	73	78.660	Pongo_abelii
ENSDORG00000011033	Blm	82	82.084	ENSPCAG00000008960	BLM	60	81.733	Procavia_capensis
ENSDORG00000011033	Blm	100	72.397	ENSPCOG00000000439	BLM	72	72.057	Propithecus_coquereli
ENSDORG00000011033	Blm	84	94.855	ENSPVAG00000011642	BLM	61	94.855	Pteropus_vampyrus
ENSDORG00000011033	Blm	99	46.132	ENSPNYG00000010956	blm	72	45.946	Pundamilia_nyererei
ENSDORG00000011033	Blm	100	80.268	ENSRNOG00000011213	Blm	74	80.172	Rattus_norvegicus
ENSDORG00000011033	Blm	100	80.287	ENSRBIG00000029656	BLM	100	80.191	Rhinopithecus_bieti
ENSDORG00000011033	Blm	100	80.383	ENSRROG00000037871	BLM	92	87.936	Rhinopithecus_roxellana
ENSDORG00000011033	Blm	88	81.308	ENSSBOG00000030957	BLM	71	81.308	Saimiri_boliviensis_boliviensis
ENSDORG00000011033	Blm	99	70.465	ENSSHAG00000007988	BLM	75	70.275	Sarcophilus_harrisii
ENSDORG00000011033	Blm	81	61.538	ENSSFOG00015015462	blm	67	61.164	Scleropages_formosus
ENSDORG00000011033	Blm	99	54.597	ENSSMAG00000001120	blm	60	63.919	Scophthalmus_maximus
ENSDORG00000011033	Blm	99	54.571	ENSSLDG00000000634	blm	59	63.919	Seriola_lalandi_dorsalis
ENSDORG00000011033	Blm	100	72.797	ENSSARG00000006398	BLM	78	72.579	Sorex_araneus
ENSDORG00000011033	Blm	99	58.667	ENSSPUG00000000013	BLM	92	58.000	Sphenodon_punctatus
ENSDORG00000011033	Blm	100	80.722	ENSSSCG00000001816	BLM	73	80.627	Sus_scrofa
ENSDORG00000011033	Blm	99	53.745	ENSTGUG00000009959	-	74	60.610	Taeniopygia_guttata
ENSDORG00000011033	Blm	75	64.631	ENSTRUG00000019860	blm	59	60.952	Takifugu_rubripes
ENSDORG00000011033	Blm	75	81.285	ENSTBEG00000006706	BLM	56	81.285	Tupaia_belangeri
ENSDORG00000011033	Blm	100	80.880	ENSTTRG00000016386	BLM	74	80.688	Tursiops_truncatus
ENSDORG00000011033	Blm	100	81.340	ENSUMAG00000009105	BLM	97	90.314	Ursus_maritimus
ENSDORG00000011033	Blm	99	77.033	ENSVPAG00000000085	BLM	74	77.033	Vicugna_pacos
ENSDORG00000011033	Blm	100	79.206	ENSVVUG00000006402	BLM	74	79.206	Vulpes_vulpes
ENSDORG00000011033	Blm	99	59.410	ENSXETG00000007847	blm	54	72.879	Xenopus_tropicalis
ENSDORG00000011033	Blm	99	52.277	ENSXCOG00000020227	blm	57	59.300	Xiphophorus_couchianus
ENSDORG00000011033	Blm	99	54.269	ENSXMAG00000002951	blm	59	61.985	Xiphophorus_maculatus