EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDORG00000011196 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Minus strand
Length: 11002 bases
Position: chrKN672378.1:3217687-3228688
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000012768	Ribonuc_P_40	PF08584.11	4e-65	1	1
ENSDORP00000010517	Ribonuc_P_40	PF08584.11	4.3e-59	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000013576	-	1059	-	ENSDORP00000012768	352 (aa)	-	UPI000BACFB0E
ENSDORT00000011195	-	963	-	ENSDORP00000010517	320 (aa)	-	UPI000BACFA91

Gene Model

Click here to download ENSDORG00000011196's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000011196's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDORG00000011196	-	100	71.046	ENSDORG00000029944	-	100	71.046

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000011196	-	100	63.277	ENSG00000124787	RPP40	100	63.277	Homo_sapiens
ENSDORG00000011196	-	100	64.706	ENSAMEG00000012938	RPP40	100	64.706	Ailuropoda_melanoleuca
ENSDORG00000011196	-	98	30.790	ENSACIG00000003617	rpp40	98	30.790	Amphilophus_citrinellus
ENSDORG00000011196	-	98	30.769	ENSAOCG00000011846	rpp40	99	30.769	Amphiprion_ocellaris
ENSDORG00000011196	-	98	30.769	ENSAPEG00000001322	rpp40	99	30.769	Amphiprion_percula
ENSDORG00000011196	-	98	31.436	ENSATEG00000006584	rpp40	99	32.075	Anabas_testudineus
ENSDORG00000011196	-	82	53.992	ENSAPLG00000005691	RPP40	92	53.448	Anas_platyrhynchos
ENSDORG00000011196	-	99	47.967	ENSACAG00000006550	RPP40	88	47.967	Anolis_carolinensis
ENSDORG00000011196	-	100	61.017	ENSANAG00000029246	RPP40	100	61.017	Aotus_nancymaae
ENSDORG00000011196	-	97	31.868	ENSACLG00000015883	rpp40	96	32.143	Astatotilapia_calliptera
ENSDORG00000011196	-	99	40.771	ENSAMXG00000001755	rpp40	99	40.771	Astyanax_mexicanus
ENSDORG00000011196	-	100	61.765	ENSBTAG00000003332	RPP40	100	61.765	Bos_taurus
ENSDORG00000011196	-	100	61.864	ENSCJAG00000021373	RPP40	100	61.864	Callithrix_jacchus
ENSDORG00000011196	-	100	63.102	ENSCAFG00000009435	RPP40	100	63.102	Canis_familiaris
ENSDORG00000011196	-	100	63.102	ENSCAFG00020013380	RPP40	100	63.102	Canis_lupus_dingo
ENSDORG00000011196	-	100	60.160	ENSCHIG00000016849	RPP40	100	60.160	Capra_hircus
ENSDORG00000011196	-	100	64.124	ENSTSYG00000032857	RPP40	100	64.124	Carlito_syrichta
ENSDORG00000011196	-	82	59.655	ENSCAPG00000004957	RPP40	83	59.655	Cavia_aperea
ENSDORG00000011196	-	100	62.198	ENSCPOG00000005855	RPP40	100	62.198	Cavia_porcellus
ENSDORG00000011196	-	100	61.582	ENSCCAG00000019809	RPP40	100	61.582	Cebus_capucinus
ENSDORG00000011196	-	100	62.735	ENSCATG00000038787	RPP40	100	62.735	Cercocebus_atys
ENSDORG00000011196	-	100	61.473	ENSCLAG00000003235	RPP40	100	61.473	Chinchilla_lanigera
ENSDORG00000011196	-	100	63.003	ENSCSAG00000007307	RPP40	100	63.003	Chlorocebus_sabaeus
ENSDORG00000011196	-	56	80.282	ENSCHOG00000005856	-	72	80.282	Choloepus_hoffmanni
ENSDORG00000011196	-	99	51.482	ENSCPBG00000009003	RPP40	99	51.482	Chrysemys_picta_bellii
ENSDORG00000011196	-	100	63.006	ENSCANG00000033965	RPP40	100	63.006	Colobus_angolensis_palliatus
ENSDORG00000011196	-	100	59.467	ENSCGRG00001018328	Rpp40	100	59.467	Cricetulus_griseus_chok1gshd
ENSDORG00000011196	-	100	59.467	ENSCGRG00000011344	Rpp40	100	59.467	Cricetulus_griseus_crigri
ENSDORG00000011196	-	99	38.692	ENSDARG00000017605	rpp40	99	38.692	Danio_rerio
ENSDORG00000011196	-	81	58.958	ENSDNOG00000048136	RPP40	99	58.958	Dasypus_novemcinctus
ENSDORG00000011196	-	85	64.706	ENSETEG00000007458	RPP40	76	63.556	Echinops_telfairi
ENSDORG00000011196	-	98	35.342	ENSEBUG00000000386	rpp40	99	35.342	Eptatretus_burgeri
ENSDORG00000011196	-	100	62.735	ENSEASG00005012116	RPP40	80	62.735	Equus_asinus_asinus
ENSDORG00000011196	-	100	63.003	ENSECAG00000017247	RPP40	80	63.003	Equus_caballus
ENSDORG00000011196	-	72	80.488	ENSEEUG00000012087	RPP40	76	80.488	Erinaceus_europaeus
ENSDORG00000011196	-	98	37.637	ENSELUG00000017004	rpp40	99	37.637	Esox_lucius
ENSDORG00000011196	-	100	62.254	ENSFCAG00000009249	RPP40	100	62.254	Felis_catus
ENSDORG00000011196	-	82	52.459	ENSFALG00000013166	RPP40	90	52.459	Ficedula_albicollis
ENSDORG00000011196	-	80	53.282	ENSFDAG00000000265	-	94	53.358	Fukomys_damarensis
ENSDORG00000011196	-	100	64.000	ENSFDAG00000013001	-	100	64.000	Fukomys_damarensis
ENSDORG00000011196	-	98	32.153	ENSFHEG00000021429	rpp40	88	32.698	Fundulus_heteroclitus
ENSDORG00000011196	-	80	31.518	ENSGMOG00000018653	rpp40	81	33.091	Gadus_morhua
ENSDORG00000011196	-	99	51.895	ENSGALG00000036074	RPP40	99	51.895	Gallus_gallus
ENSDORG00000011196	-	82	30.000	ENSGAFG00000004189	-	91	30.000	Gambusia_affinis
ENSDORG00000011196	-	98	31.593	ENSGACG00000002472	rpp40	99	31.868	Gasterosteus_aculeatus
ENSDORG00000011196	-	99	52.561	ENSGAGG00000012918	RPP40	99	52.561	Gopherus_agassizii
ENSDORG00000011196	-	100	63.277	ENSGGOG00000013764	RPP40	100	63.277	Gorilla_gorilla
ENSDORG00000011196	-	82	33.218	ENSHBUG00000009378	rpp40	78	33.218	Haplochromis_burtoni
ENSDORG00000011196	-	100	61.867	ENSHGLG00000004871	RPP40	100	61.867	Heterocephalus_glaber_female
ENSDORG00000011196	-	100	62.133	ENSHGLG00100002080	RPP40	100	62.133	Heterocephalus_glaber_male
ENSDORG00000011196	-	99	39.402	ENSIPUG00000008951	RPP40	99	39.402	Ictalurus_punctatus
ENSDORG00000011196	-	100	64.879	ENSSTOG00000011199	RPP40	100	64.879	Ictidomys_tridecemlineatus
ENSDORG00000011196	-	100	59.030	ENSJJAG00000020629	Rpp40	100	59.030	Jaculus_jaculus
ENSDORG00000011196	-	98	30.790	ENSKMAG00000019358	rpp40	99	31.063	Kryptolebias_marmoratus
ENSDORG00000011196	-	98	32.520	ENSLBEG00000022724	rpp40	99	32.520	Labrus_bergylta
ENSDORG00000011196	-	99	46.995	ENSLACG00000014848	RPP40	99	46.995	Latimeria_chalumnae
ENSDORG00000011196	-	100	43.089	ENSLOCG00000011650	rpp40	100	43.089	Lepisosteus_oculatus
ENSDORG00000011196	-	82	66.207	ENSLAFG00000007530	RPP40	98	63.441	Loxodonta_africana
ENSDORG00000011196	-	100	62.994	ENSMFAG00000043100	RPP40	100	62.994	Macaca_fascicularis
ENSDORG00000011196	-	100	62.994	ENSMMUG00000004966	RPP40	100	62.994	Macaca_mulatta
ENSDORG00000011196	-	100	63.295	ENSMNEG00000041986	RPP40	100	63.295	Macaca_nemestrina
ENSDORG00000011196	-	98	58.805	ENSMLEG00000040851	RPP40	100	65.761	Mandrillus_leucophaeus
ENSDORG00000011196	-	98	31.707	ENSMAMG00000019551	rpp40	98	31.707	Mastacembelus_armatus
ENSDORG00000011196	-	99	32.258	ENSMZEG00005019475	rpp40	99	32.527	Maylandia_zebra
ENSDORG00000011196	-	80	58.366	ENSMGAG00000004009	RPP40	75	58.182	Meleagris_gallopavo
ENSDORG00000011196	-	100	61.600	ENSMAUG00000010268	Rpp40	100	61.600	Mesocricetus_auratus
ENSDORG00000011196	-	100	63.099	ENSMICG00000003297	RPP40	100	63.099	Microcebus_murinus
ENSDORG00000011196	-	100	61.561	ENSMOCG00000000305	Rpp40	100	61.561	Microtus_ochrogaster
ENSDORG00000011196	-	98	31.746	ENSMMOG00000020591	-	99	31.746	Mola_mola
ENSDORG00000011196	-	100	58.021	ENSMODG00000009826	RPP40	100	58.021	Monodelphis_domestica
ENSDORG00000011196	-	98	31.522	ENSMALG00000020133	rpp40	99	31.522	Monopterus_albus
ENSDORG00000011196	-	100	61.850	MGP_CAROLIEiJ_G0018429	Rpp40	100	61.850	Mus_caroli
ENSDORG00000011196	-	100	61.930	ENSMUSG00000021418	Rpp40	100	61.930	Mus_musculus
ENSDORG00000011196	-	100	61.662	MGP_PahariEiJ_G0019497	Rpp40	100	61.662	Mus_pahari
ENSDORG00000011196	-	100	61.662	MGP_SPRETEiJ_G0019309	Rpp40	100	61.662	Mus_spretus
ENSDORG00000011196	-	100	63.369	ENSMPUG00000000530	RPP40	93	63.369	Mustela_putorius_furo
ENSDORG00000011196	-	100	61.497	ENSMLUG00000000501	RPP40	100	61.497	Myotis_lucifugus
ENSDORG00000011196	-	100	63.807	ENSNGAG00000023955	-	100	63.807	Nannospalax_galili
ENSDORG00000011196	-	95	64.881	ENSNGAG00000022529	-	100	64.881	Nannospalax_galili
ENSDORG00000011196	-	82	31.203	ENSNBRG00000017465	rpp40	73	32.331	Neolamprologus_brichardi
ENSDORG00000011196	-	100	62.428	ENSNLEG00000034397	RPP40	100	62.428	Nomascus_leucogenys
ENSDORG00000011196	-	100	54.907	ENSMEUG00000005300	RPP40	100	54.907	Notamacropus_eugenii
ENSDORG00000011196	-	80	65.759	ENSODEG00000006170	-	95	60.345	Octodon_degus
ENSDORG00000011196	-	100	61.394	ENSODEG00000007255	-	100	61.394	Octodon_degus
ENSDORG00000011196	-	100	60.322	ENSODEG00000018153	-	100	60.322	Octodon_degus
ENSDORG00000011196	-	99	32.796	ENSONIG00000014016	rpp40	99	33.065	Oreochromis_niloticus
ENSDORG00000011196	-	82	57.388	ENSOANG00000001200	RPP40	92	57.388	Ornithorhynchus_anatinus
ENSDORG00000011196	-	99	56.568	ENSOCUG00000000354	RPP40	99	56.568	Oryctolagus_cuniculus
ENSDORG00000011196	-	99	31.250	ENSORLG00000008242	-	100	31.250	Oryzias_latipes
ENSDORG00000011196	-	99	30.978	ENSORLG00020013745	-	91	30.978	Oryzias_latipes_hni
ENSDORG00000011196	-	99	31.250	ENSORLG00015000887	-	100	31.250	Oryzias_latipes_hsok
ENSDORG00000011196	-	99	31.903	ENSOMEG00000002747	rpp40	100	31.903	Oryzias_melastigma
ENSDORG00000011196	-	100	63.102	ENSOGAG00000006055	RPP40	100	63.102	Otolemur_garnettii
ENSDORG00000011196	-	82	64.605	ENSOARG00000018783	RPP40	92	64.605	Ovis_aries
ENSDORG00000011196	-	100	63.277	ENSPPAG00000023703	RPP40	100	63.277	Pan_paniscus
ENSDORG00000011196	-	100	62.254	ENSPPRG00000005612	RPP40	100	62.254	Panthera_pardus
ENSDORG00000011196	-	100	58.757	ENSPTIG00000018847	RPP40	100	58.757	Panthera_tigris_altaica
ENSDORG00000011196	-	100	63.559	ENSPTRG00000017690	RPP40	100	63.559	Pan_troglodytes
ENSDORG00000011196	-	100	63.006	ENSPANG00000017865	RPP40	100	63.006	Papio_anubis
ENSDORG00000011196	-	99	37.027	ENSPKIG00000006311	rpp40	99	37.705	Paramormyrops_kingsleyae
ENSDORG00000011196	-	71	54.626	ENSPSIG00000007854	RPP40	99	54.626	Pelodiscus_sinensis
ENSDORG00000011196	-	93	60.423	ENSPEMG00000020809	Rpp40	91	61.342	Peromyscus_maniculatus_bairdii
ENSDORG00000011196	-	81	37.023	ENSPMAG00000008412	rpp40	97	38.545	Petromyzon_marinus
ENSDORG00000011196	-	100	60.322	ENSPCIG00000010682	RPP40	100	60.322	Phascolarctos_cinereus
ENSDORG00000011196	-	98	30.081	ENSPFOG00000011460	rpp40	98	30.081	Poecilia_formosa
ENSDORG00000011196	-	80	30.769	ENSPLAG00000001334	rpp40	68	30.769	Poecilia_latipinna
ENSDORG00000011196	-	98	31.880	ENSPREG00000009215	rpp40	99	31.880	Poecilia_reticulata
ENSDORG00000011196	-	100	63.271	ENSPPYG00000016194	RPP40	100	63.271	Pongo_abelii
ENSDORG00000011196	-	100	62.817	ENSPCOG00000003907	RPP40	100	62.817	Propithecus_coquereli
ENSDORG00000011196	-	100	63.102	ENSPVAG00000011325	RPP40	100	63.102	Pteropus_vampyrus
ENSDORG00000011196	-	80	31.034	ENSPNYG00000004432	rpp40	88	33.700	Pundamilia_nyererei
ENSDORG00000011196	-	98	37.568	ENSPNAG00000019125	rpp40	99	37.568	Pygocentrus_nattereri
ENSDORG00000011196	-	100	62.466	ENSRNOG00000016226	Rpp40	100	62.466	Rattus_norvegicus
ENSDORG00000011196	-	100	62.735	ENSRBIG00000035800	RPP40	100	63.295	Rhinopithecus_bieti
ENSDORG00000011196	-	100	62.735	ENSRROG00000039116	RPP40	100	63.295	Rhinopithecus_roxellana
ENSDORG00000011196	-	100	61.299	ENSSBOG00000020297	RPP40	100	61.299	Saimiri_boliviensis_boliviensis
ENSDORG00000011196	-	80	64.202	ENSSHAG00000002102	RPP40	97	64.493	Sarcophilus_harrisii
ENSDORG00000011196	-	98	39.071	ENSSFOG00015001142	rpp40	80	39.071	Scleropages_formosus
ENSDORG00000011196	-	98	31.165	ENSSDUG00000007202	rpp40	99	31.165	Seriola_dumerili
ENSDORG00000011196	-	98	31.436	ENSSLDG00000017563	rpp40	99	31.436	Seriola_lalandi_dorsalis
ENSDORG00000011196	-	82	53.232	ENSSPUG00000018950	-	95	53.103	Sphenodon_punctatus
ENSDORG00000011196	-	99	52.022	ENSSPUG00000017487	-	99	52.022	Sphenodon_punctatus
ENSDORG00000011196	-	98	32.153	ENSSPAG00000022716	rpp40	99	32.143	Stegastes_partitus
ENSDORG00000011196	-	100	59.626	ENSSSCG00000000998	RPP40	100	59.626	Sus_scrofa
ENSDORG00000011196	-	57	56.284	ENSTGUG00000015246	-	100	56.284	Taeniopygia_guttata
ENSDORG00000011196	-	99	50.549	ENSTGUG00000002258	-	100	50.549	Taeniopygia_guttata
ENSDORG00000011196	-	97	31.476	ENSTRUG00000003755	rpp40	98	31.476	Takifugu_rubripes
ENSDORG00000011196	-	99	30.055	ENSTNIG00000003077	rpp40	99	30.055	Tetraodon_nigroviridis
ENSDORG00000011196	-	80	48.047	ENSTBEG00000014467	-	73	48.047	Tupaia_belangeri
ENSDORG00000011196	-	92	86.842	ENSTTRG00000007319	RPP40	80	86.842	Tursiops_truncatus
ENSDORG00000011196	-	100	64.171	ENSUAMG00000002159	RPP40	100	64.171	Ursus_americanus
ENSDORG00000011196	-	100	64.171	ENSUMAG00000018639	RPP40	94	64.171	Ursus_maritimus
ENSDORG00000011196	-	58	55.556	ENSVPAG00000004652	-	63	55.556	Vicugna_pacos
ENSDORG00000011196	-	100	63.271	ENSVVUG00000005451	RPP40	100	63.271	Vulpes_vulpes
ENSDORG00000011196	-	99	45.330	ENSXETG00000017617	rpp40	100	44.837	Xenopus_tropicalis