EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDORG00000011362 (Gene tree)
Gene ID: 106001687
Gene Symbol: -
Alias: -
Full Name: polyadenylate-binding protein 1-like 2
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Minus strand
Length: 603 bases
Position: chrKN672710.1:420063-420665
Accession: 106001687
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000010680	RRM_1	PF00076.22	9.5e-43	1	2
ENSDORP00000010680	RRM_1	PF00076.22	9.5e-43	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000011362	-	603	XM_013036704	ENSDORP00000010680	200 (aa)	XP_012892158	A0A1S3GTD3

Gene Model

Click here to download ENSDORG00000011362's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000011362's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDORG00000011362	-	85	32.237	ENSDORG00000009158	Elavl1	94	32.237
ENSDORG00000011362	-	80	44.444	ENSDORG00000004926	-	58	44.444
ENSDORG00000011362	-	79	31.638	ENSDORG00000010683	Tial1	74	31.638
ENSDORG00000011362	-	78	39.024	ENSDORG00000000801	Rbm11	58	39.024
ENSDORG00000011362	-	98	75.510	ENSDORG00000011581	Pabpc4	57	75.510
ENSDORG00000011362	-	99	68.528	ENSDORG00000001067	Pabpc1l	60	68.528
ENSDORG00000011362	-	98	77.551	ENSDORG00000013935	Pabpc1	58	77.551

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000011362	-	100	96.500	ENSG00000186288	PABPC1L2A	100	96.500	Homo_sapiens
ENSDORG00000011362	-	100	96.500	ENSG00000184388	PABPC1L2B	100	96.500	Homo_sapiens
ENSDORG00000011362	-	98	77.041	ENSAPOG00000017776	pabpc1b	60	77.041	Acanthochromis_polyacanthus
ENSDORG00000011362	-	98	77.551	ENSAPOG00000015105	pabpc1a	58	77.551	Acanthochromis_polyacanthus
ENSDORG00000011362	-	100	97.000	ENSAMEG00000019441	-	100	97.000	Ailuropoda_melanoleuca
ENSDORG00000011362	-	98	77.041	ENSACIG00000018366	pabpc1b	59	77.041	Amphilophus_citrinellus
ENSDORG00000011362	-	98	77.551	ENSACIG00000004685	pabpc1a	58	77.551	Amphilophus_citrinellus
ENSDORG00000011362	-	98	77.551	ENSAOCG00000019839	pabpc1b	58	77.551	Amphiprion_ocellaris
ENSDORG00000011362	-	98	77.551	ENSAOCG00000011656	pabpc1a	58	77.551	Amphiprion_ocellaris
ENSDORG00000011362	-	98	77.551	ENSAPEG00000006963	pabpc1a	58	77.551	Amphiprion_percula
ENSDORG00000011362	-	98	77.551	ENSAPEG00000010435	pabpc1b	58	77.551	Amphiprion_percula
ENSDORG00000011362	-	98	77.551	ENSATEG00000012917	pabpc1b	58	77.551	Anabas_testudineus
ENSDORG00000011362	-	98	77.551	ENSATEG00000024852	pabpc1a	58	77.551	Anabas_testudineus
ENSDORG00000011362	-	100	96.500	ENSANAG00000019429	-	100	96.500	Aotus_nancymaae
ENSDORG00000011362	-	100	96.500	ENSANAG00000019431	-	100	96.500	Aotus_nancymaae
ENSDORG00000011362	-	98	77.551	ENSACLG00000009399	pabpc1a	68	76.111	Astatotilapia_calliptera
ENSDORG00000011362	-	98	76.531	ENSACLG00000014335	pabpc1b	58	76.531	Astatotilapia_calliptera
ENSDORG00000011362	-	98	77.041	ENSAMXG00000008599	pabpc1b	58	77.041	Astyanax_mexicanus
ENSDORG00000011362	-	100	97.500	ENSBTAG00000052491	-	94	97.500	Bos_taurus
ENSDORG00000011362	-	100	97.000	ENSBTAG00000050902	-	95	97.000	Bos_taurus
ENSDORG00000011362	-	100	96.500	ENSCJAG00000041326	-	100	96.500	Callithrix_jacchus
ENSDORG00000011362	-	100	97.000	ENSCAFG00020002052	-	96	97.000	Canis_lupus_dingo
ENSDORG00000011362	-	100	96.500	ENSCHIG00000006283	-	100	96.500	Capra_hircus
ENSDORG00000011362	-	100	97.000	ENSCHIG00000011138	-	100	97.000	Capra_hircus
ENSDORG00000011362	-	100	97.000	ENSTSYG00000001775	-	100	97.000	Carlito_syrichta
ENSDORG00000011362	-	100	96.500	ENSCPOG00000009525	-	100	96.500	Cavia_porcellus
ENSDORG00000011362	-	100	96.500	ENSCCAG00000031524	-	100	96.500	Cebus_capucinus
ENSDORG00000011362	-	100	96.500	ENSCATG00000043125	-	100	96.500	Cercocebus_atys
ENSDORG00000011362	-	100	96.500	ENSCATG00000042826	-	100	96.500	Cercocebus_atys
ENSDORG00000011362	-	100	95.000	ENSCLAG00000017409	-	100	95.000	Chinchilla_lanigera
ENSDORG00000011362	-	100	95.000	ENSCLAG00000017412	-	100	95.000	Chinchilla_lanigera
ENSDORG00000011362	-	100	96.500	ENSCSAG00000000102	-	100	96.500	Chlorocebus_sabaeus
ENSDORG00000011362	-	99	91.960	ENSCGRG00001023387	-	98	91.960	Cricetulus_griseus_chok1gshd
ENSDORG00000011362	-	98	76.531	ENSCSEG00000015241	-	58	76.531	Cynoglossus_semilaevis
ENSDORG00000011362	-	98	77.551	ENSCSEG00000013324	pabpc1a	58	77.551	Cynoglossus_semilaevis
ENSDORG00000011362	-	98	78.061	ENSCVAG00000005489	pabpc1b	58	78.061	Cyprinodon_variegatus
ENSDORG00000011362	-	98	77.551	ENSCVAG00000021872	pabpc1a	58	77.551	Cyprinodon_variegatus
ENSDORG00000011362	-	98	77.041	ENSDARG00000017219	pabpc1a	58	77.041	Danio_rerio
ENSDORG00000011362	-	98	76.531	ENSDARG00000021140	pabpc1b	99	81.818	Danio_rerio
ENSDORG00000011362	-	100	96.000	ENSDNOG00000030926	-	100	96.000	Dasypus_novemcinctus
ENSDORG00000011362	-	100	97.500	ENSEASG00005010399	-	95	97.500	Equus_asinus_asinus
ENSDORG00000011362	-	100	97.500	ENSECAG00000002620	-	95	97.500	Equus_caballus
ENSDORG00000011362	-	100	93.000	ENSEEUG00000008203	-	100	93.000	Erinaceus_europaeus
ENSDORG00000011362	-	98	77.551	ENSELUG00000015062	-	58	77.551	Esox_lucius
ENSDORG00000011362	-	98	77.041	ENSELUG00000003614	pabpc1a	58	77.041	Esox_lucius
ENSDORG00000011362	-	93	55.615	ENSELUG00000005389	-	78	55.615	Esox_lucius
ENSDORG00000011362	-	100	97.000	ENSFCAG00000039701	-	100	97.000	Felis_catus
ENSDORG00000011362	-	100	96.500	ENSFDAG00000005484	-	100	96.500	Fukomys_damarensis
ENSDORG00000011362	-	98	77.551	ENSFHEG00000018979	pabpc1a	58	77.551	Fundulus_heteroclitus
ENSDORG00000011362	-	98	77.551	ENSFHEG00000008186	pabpc1b	58	77.551	Fundulus_heteroclitus
ENSDORG00000011362	-	98	77.041	ENSGMOG00000013448	pabpc1a	57	77.041	Gadus_morhua
ENSDORG00000011362	-	98	77.041	ENSGMOG00000002448	-	57	77.041	Gadus_morhua
ENSDORG00000011362	-	98	77.551	ENSGAFG00000019750	pabpc1a	61	77.551	Gambusia_affinis
ENSDORG00000011362	-	98	78.061	ENSGAFG00000010193	pabpc1b	60	78.061	Gambusia_affinis
ENSDORG00000011362	-	98	78.061	ENSGACG00000003771	pabpc1b	64	78.061	Gasterosteus_aculeatus
ENSDORG00000011362	-	98	77.551	ENSGACG00000003572	pabpc1a	58	77.551	Gasterosteus_aculeatus
ENSDORG00000011362	-	100	96.500	ENSGGOG00000043933	-	100	96.500	Gorilla_gorilla
ENSDORG00000011362	-	100	96.500	ENSGGOG00000038606	-	100	96.500	Gorilla_gorilla
ENSDORG00000011362	-	98	77.551	ENSHBUG00000020487	pabpc1a	68	76.111	Haplochromis_burtoni
ENSDORG00000011362	-	98	76.531	ENSHBUG00000002075	pabpc1b	60	76.531	Haplochromis_burtoni
ENSDORG00000011362	-	100	95.500	ENSHGLG00000019762	-	100	95.500	Heterocephalus_glaber_female
ENSDORG00000011362	-	100	95.500	ENSHGLG00000019668	-	100	95.500	Heterocephalus_glaber_female
ENSDORG00000011362	-	100	95.500	ENSHGLG00100020854	-	100	95.500	Heterocephalus_glaber_male
ENSDORG00000011362	-	95	67.196	ENSHCOG00000003175	pabpc1b	69	66.327	Hippocampus_comes
ENSDORG00000011362	-	98	77.551	ENSHCOG00000013502	pabpc1a	58	77.551	Hippocampus_comes
ENSDORG00000011362	-	98	60.309	ENSIPUG00000021244	-	52	59.694	Ictalurus_punctatus
ENSDORG00000011362	-	98	77.041	ENSIPUG00000010791	-	61	77.041	Ictalurus_punctatus
ENSDORG00000011362	-	98	77.041	ENSIPUG00000008848	pabpc1a	59	77.041	Ictalurus_punctatus
ENSDORG00000011362	-	100	97.000	ENSSTOG00000022096	-	100	97.000	Ictidomys_tridecemlineatus
ENSDORG00000011362	-	100	97.000	ENSSTOG00000026028	-	100	97.000	Ictidomys_tridecemlineatus
ENSDORG00000011362	-	100	97.500	ENSJJAG00000007037	-	100	97.500	Jaculus_jaculus
ENSDORG00000011362	-	98	77.551	ENSKMAG00000000605	pabpc1a	58	77.551	Kryptolebias_marmoratus
ENSDORG00000011362	-	98	77.551	ENSKMAG00000008049	pabpc1b	63	77.551	Kryptolebias_marmoratus
ENSDORG00000011362	-	98	77.551	ENSLBEG00000024002	-	58	77.551	Labrus_bergylta
ENSDORG00000011362	-	98	77.551	ENSLBEG00000026845	pabpc1b	58	77.551	Labrus_bergylta
ENSDORG00000011362	-	99	94.472	ENSLAFG00000023096	-	99	94.472	Loxodonta_africana
ENSDORG00000011362	-	100	96.020	ENSMFAG00000028878	-	100	96.020	Macaca_fascicularis
ENSDORG00000011362	-	100	96.500	ENSMMUG00000039929	-	100	96.500	Macaca_mulatta
ENSDORG00000011362	-	100	96.500	ENSMMUG00000009740	-	100	96.500	Macaca_mulatta
ENSDORG00000011362	-	100	96.500	ENSMMUG00000037681	-	100	96.500	Macaca_mulatta
ENSDORG00000011362	-	100	96.500	ENSMNEG00000037732	-	100	96.500	Macaca_nemestrina
ENSDORG00000011362	-	100	96.500	ENSMLEG00000027495	-	100	96.500	Mandrillus_leucophaeus
ENSDORG00000011362	-	98	77.551	ENSMAMG00000014610	pabpc1b	59	77.551	Mastacembelus_armatus
ENSDORG00000011362	-	98	77.551	ENSMAMG00000004502	-	68	76.111	Mastacembelus_armatus
ENSDORG00000011362	-	98	76.531	ENSMZEG00005026745	pabpc1b	58	76.531	Maylandia_zebra
ENSDORG00000011362	-	98	77.551	ENSMZEG00005025416	pabpc1a	68	76.111	Maylandia_zebra
ENSDORG00000011362	-	100	97.500	ENSMICG00000047642	-	100	97.500	Microcebus_murinus
ENSDORG00000011362	-	98	77.551	ENSMMOG00000018009	pabpc1b	62	77.551	Mola_mola
ENSDORG00000011362	-	98	77.551	ENSMMOG00000018044	pabpc1a	68	76.111	Mola_mola
ENSDORG00000011362	-	98	66.154	ENSMODG00000015024	-	57	66.154	Monodelphis_domestica
ENSDORG00000011362	-	98	72.959	ENSMODG00000013156	-	58	72.959	Monodelphis_domestica
ENSDORG00000011362	-	98	77.551	ENSMALG00000006066	pabpc1b	63	77.551	Monopterus_albus
ENSDORG00000011362	-	98	77.551	ENSMALG00000013020	-	62	77.551	Monopterus_albus
ENSDORG00000011362	-	100	97.000	ENSNGAG00000012688	-	100	97.000	Nannospalax_galili
ENSDORG00000011362	-	98	77.551	ENSNBRG00000003068	-	68	76.111	Neolamprologus_brichardi
ENSDORG00000011362	-	98	76.531	ENSNBRG00000013737	pabpc1b	62	76.531	Neolamprologus_brichardi
ENSDORG00000011362	-	100	96.500	ENSNLEG00000018128	-	100	96.500	Nomascus_leucogenys
ENSDORG00000011362	-	100	94.000	ENSODEG00000018540	-	100	94.000	Octodon_degus
ENSDORG00000011362	-	98	77.551	ENSONIG00000006871	-	58	77.551	Oreochromis_niloticus
ENSDORG00000011362	-	98	76.531	ENSONIG00000002717	pabpc1b	58	76.531	Oreochromis_niloticus
ENSDORG00000011362	-	100	97.000	ENSOCUG00000002565	-	100	97.000	Oryctolagus_cuniculus
ENSDORG00000011362	-	98	77.551	ENSORLG00000002691	pabpc1a	68	76.111	Oryzias_latipes
ENSDORG00000011362	-	98	74.490	ENSORLG00000003008	-	58	74.490	Oryzias_latipes
ENSDORG00000011362	-	98	77.551	ENSORLG00020022398	pabpc1a	58	77.551	Oryzias_latipes_hni
ENSDORG00000011362	-	98	74.490	ENSORLG00020022259	-	58	74.490	Oryzias_latipes_hni
ENSDORG00000011362	-	98	74.490	ENSORLG00015010932	-	58	74.490	Oryzias_latipes_hsok
ENSDORG00000011362	-	98	77.551	ENSORLG00015013633	pabpc1	58	77.551	Oryzias_latipes_hsok
ENSDORG00000011362	-	98	77.551	ENSOMEG00000020219	pabpc1a	58	77.551	Oryzias_melastigma
ENSDORG00000011362	-	98	73.889	ENSOMEG00000013627	pabpc1b	67	73.889	Oryzias_melastigma
ENSDORG00000011362	-	100	97.500	ENSOGAG00000029513	-	100	97.500	Otolemur_garnettii
ENSDORG00000011362	-	100	97.500	ENSOGAG00000026047	-	100	97.500	Otolemur_garnettii
ENSDORG00000011362	-	100	96.500	ENSOARG00000005943	-	100	96.500	Ovis_aries
ENSDORG00000011362	-	100	96.500	ENSPPAG00000012920	-	100	96.500	Pan_paniscus
ENSDORG00000011362	-	100	97.000	ENSPPRG00000011804	-	100	97.000	Panthera_pardus
ENSDORG00000011362	-	100	97.000	ENSPPRG00000011809	-	100	97.000	Panthera_pardus
ENSDORG00000011362	-	100	96.500	ENSPTRG00000028252	-	100	96.500	Pan_troglodytes
ENSDORG00000011362	-	100	96.500	ENSPANG00000011549	-	100	96.500	Papio_anubis
ENSDORG00000011362	-	98	77.041	ENSPKIG00000005676	pabpc1b	58	77.041	Paramormyrops_kingsleyae
ENSDORG00000011362	-	98	78.061	ENSPMGG00000023134	-	79	78.061	Periophthalmus_magnuspinnatus
ENSDORG00000011362	-	98	77.665	ENSPMGG00000022487	pabpc1a	76	77.665	Periophthalmus_magnuspinnatus
ENSDORG00000011362	-	98	77.551	ENSPFOG00000005917	pabpc1b	58	77.551	Poecilia_formosa
ENSDORG00000011362	-	98	77.551	ENSPFOG00000010815	pabpc1a	57	77.551	Poecilia_formosa
ENSDORG00000011362	-	98	77.551	ENSPLAG00000004114	pabpc1a	58	77.551	Poecilia_latipinna
ENSDORG00000011362	-	98	78.061	ENSPLAG00000001388	pabpc1b	58	78.061	Poecilia_latipinna
ENSDORG00000011362	-	98	77.551	ENSPMEG00000014399	pabpc1b	61	75.000	Poecilia_mexicana
ENSDORG00000011362	-	98	77.551	ENSPMEG00000001334	pabpc1a	58	77.551	Poecilia_mexicana
ENSDORG00000011362	-	98	77.551	ENSPREG00000019595	pabpc1a	92	86.885	Poecilia_reticulata
ENSDORG00000011362	-	98	78.061	ENSPREG00000010911	pabpc1b	60	78.061	Poecilia_reticulata
ENSDORG00000011362	-	100	96.500	ENSPPYG00000020468	-	100	96.500	Pongo_abelii
ENSDORG00000011362	-	100	96.000	ENSPCAG00000005308	-	100	96.000	Procavia_capensis
ENSDORG00000011362	-	100	98.000	ENSPCOG00000026349	-	100	98.000	Propithecus_coquereli
ENSDORG00000011362	-	100	93.000	ENSPVAG00000016117	-	100	93.000	Pteropus_vampyrus
ENSDORG00000011362	-	98	77.551	ENSPNYG00000005192	pabpc1a	61	76.111	Pundamilia_nyererei
ENSDORG00000011362	-	98	76.531	ENSPNYG00000012578	pabpc1b	60	76.531	Pundamilia_nyererei
ENSDORG00000011362	-	98	77.551	ENSPNAG00000024626	pabpc1b	58	77.551	Pygocentrus_nattereri
ENSDORG00000011362	-	98	76.020	ENSPNAG00000028408	pabpc1a	64	76.020	Pygocentrus_nattereri
ENSDORG00000011362	-	100	96.500	ENSRBIG00000027173	-	100	96.500	Rhinopithecus_bieti
ENSDORG00000011362	-	99	76.142	ENSRBIG00000028738	-	69	76.142	Rhinopithecus_bieti
ENSDORG00000011362	-	100	96.500	ENSRROG00000017404	-	100	96.500	Rhinopithecus_roxellana
ENSDORG00000011362	-	98	67.857	ENSSHAG00000000511	-	59	67.857	Sarcophilus_harrisii
ENSDORG00000011362	-	98	77.551	ENSSFOG00015006662	pabpc1a	58	77.551	Scleropages_formosus
ENSDORG00000011362	-	98	77.551	ENSSFOG00015002752	-	58	77.551	Scleropages_formosus
ENSDORG00000011362	-	87	67.816	ENSSFOG00015019668	-	67	67.816	Scleropages_formosus
ENSDORG00000011362	-	98	77.551	ENSSMAG00000006869	pabpc1b	58	77.551	Scophthalmus_maximus
ENSDORG00000011362	-	98	77.551	ENSSMAG00000010803	pabpc1a	58	77.551	Scophthalmus_maximus
ENSDORG00000011362	-	98	77.041	ENSSDUG00000011965	pabpc1b	58	77.041	Seriola_dumerili
ENSDORG00000011362	-	98	77.551	ENSSDUG00000006675	pabpc1a	58	77.551	Seriola_dumerili
ENSDORG00000011362	-	98	77.551	ENSSLDG00000011661	pabpc1a	58	77.551	Seriola_lalandi_dorsalis
ENSDORG00000011362	-	98	77.041	ENSSLDG00000014156	pabpc1b	58	77.041	Seriola_lalandi_dorsalis
ENSDORG00000011362	-	98	77.551	ENSSPAG00000014453	-	58	77.551	Stegastes_partitus
ENSDORG00000011362	-	98	77.041	ENSSPAG00000019265	pabpc1b	63	77.041	Stegastes_partitus
ENSDORG00000011362	-	100	97.000	ENSSSCG00000036336	-	100	97.000	Sus_scrofa
ENSDORG00000011362	-	100	97.000	ENSSSCG00000032167	-	100	97.000	Sus_scrofa
ENSDORG00000011362	-	98	78.571	ENSTRUG00000003767	-	59	78.571	Takifugu_rubripes
ENSDORG00000011362	-	98	77.551	ENSTRUG00000011577	-	58	77.551	Takifugu_rubripes
ENSDORG00000011362	-	98	79.082	ENSTNIG00000009153	pabpc1b	58	79.082	Tetraodon_nigroviridis
ENSDORG00000011362	-	98	73.267	ENSTNIG00000013307	pabpc1a	58	73.267	Tetraodon_nigroviridis
ENSDORG00000011362	-	100	97.000	ENSTTRG00000013181	-	100	97.000	Tursiops_truncatus
ENSDORG00000011362	-	100	97.000	ENSUAMG00000008089	-	100	97.000	Ursus_americanus
ENSDORG00000011362	-	99	57.868	ENSUMAG00000023926	-	88	57.360	Ursus_maritimus
ENSDORG00000011362	-	100	97.000	ENSUMAG00000003364	-	100	97.000	Ursus_maritimus
ENSDORG00000011362	-	100	96.500	ENSVVUG00000015892	-	97	96.500	Vulpes_vulpes
ENSDORG00000011362	-	98	78.061	ENSXCOG00000019901	pabpc1b	60	78.061	Xiphophorus_couchianus
ENSDORG00000011362	-	98	77.551	ENSXCOG00000017066	pabpc1a	61	77.551	Xiphophorus_couchianus
ENSDORG00000011362	-	98	78.061	ENSXMAG00000003753	pabpc1b	89	78.061	Xiphophorus_maculatus
ENSDORG00000011362	-	98	77.551	ENSXMAG00000002555	pabpc1a	60	77.551	Xiphophorus_maculatus