EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDORG00000011453 (Gene tree)
Gene ID: 105983602
Gene Symbol: Pum2
Alias: 5730503J23Rik|Pumm2
Full Name: pumilio RNA binding family member 2
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Plus strand
Length: 73924 bases
Position: chrKN672366.1:13881069-13954992
Accession: 105983602
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000010766	PUF	PF00806.19	2e-72	1	8
ENSDORP00000010766	PUF	PF00806.19	2e-72	2	8
ENSDORP00000010766	PUF	PF00806.19	2e-72	3	8
ENSDORP00000010766	PUF	PF00806.19	2e-72	4	8
ENSDORP00000010766	PUF	PF00806.19	2e-72	5	8
ENSDORP00000010766	PUF	PF00806.19	2e-72	6	8
ENSDORP00000010766	PUF	PF00806.19	2e-72	7	8
ENSDORP00000010766	PUF	PF00806.19	2e-72	8	8

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000011454	-	3090	XM_013013546	ENSDORP00000010766	1029 (aa)	XP_012869000	UPI000BAD27EF

Gene Model

Click here to download ENSDORG00000011453's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000011453's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDORG00000011453	Pum2	93	88.164	ENSDORG00000001875	Pum1	99	57.288

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000011453	Pum2	100	92.056	ENSG00000055917	PUM2	100	100.000	Homo_sapiens
ENSDORG00000011453	Pum2	89	90.268	ENSAPOG00000015756	pum2	97	80.753	Acanthochromis_polyacanthus
ENSDORG00000011453	Pum2	100	92.344	ENSAMEG00000002823	PUM2	100	92.344	Ailuropoda_melanoleuca
ENSDORG00000011453	Pum2	89	85.655	ENSACIG00000010646	pum2	99	83.806	Amphilophus_citrinellus
ENSDORG00000011453	Pum2	98	67.280	ENSAOCG00000016619	pum2	87	71.268	Amphiprion_ocellaris
ENSDORG00000011453	Pum2	89	90.268	ENSAPEG00000019924	pum2	97	80.753	Amphiprion_percula
ENSDORG00000011453	Pum2	100	70.849	ENSATEG00000015030	pum2	90	72.970	Anabas_testudineus
ENSDORG00000011453	Pum2	100	86.648	ENSAPLG00000010496	PUM2	90	86.555	Anas_platyrhynchos
ENSDORG00000011453	Pum2	100	86.785	ENSACAG00000010491	PUM2	100	86.810	Anolis_carolinensis
ENSDORG00000011453	Pum2	100	92.336	ENSANAG00000021807	PUM2	100	92.336	Aotus_nancymaae
ENSDORG00000011453	Pum2	100	69.982	ENSACLG00000022532	pum2	89	72.744	Astatotilapia_calliptera
ENSDORG00000011453	Pum2	100	91.869	ENSBTAG00000011155	PUM2	100	95.712	Bos_taurus
ENSDORG00000011453	Pum2	100	92.243	ENSCJAG00000007450	PUM2	100	92.243	Callithrix_jacchus
ENSDORG00000011453	Pum2	100	92.150	ENSCAFG00000003839	PUM2	100	92.150	Canis_familiaris
ENSDORG00000011453	Pum2	100	91.121	ENSCAFG00020025689	PUM2	100	91.323	Canis_lupus_dingo
ENSDORG00000011453	Pum2	100	91.963	ENSCHIG00000022180	PUM2	100	91.963	Capra_hircus
ENSDORG00000011453	Pum2	100	91.963	ENSTSYG00000014463	PUM2	100	91.963	Carlito_syrichta
ENSDORG00000011453	Pum2	93	86.782	ENSCAPG00000016888	PUM2	98	95.626	Cavia_aperea
ENSDORG00000011453	Pum2	100	91.974	ENSCPOG00000031996	PUM2	100	91.698	Cavia_porcellus
ENSDORG00000011453	Pum2	100	92.430	ENSCCAG00000037035	PUM2	100	92.430	Cebus_capucinus
ENSDORG00000011453	Pum2	100	92.243	ENSCATG00000043826	PUM2	100	92.243	Cercocebus_atys
ENSDORG00000011453	Pum2	100	92.063	ENSCLAG00000006048	PUM2	100	92.063	Chinchilla_lanigera
ENSDORG00000011453	Pum2	100	92.243	ENSCSAG00000008087	PUM2	100	92.243	Chlorocebus_sabaeus
ENSDORG00000011453	Pum2	84	88.710	ENSCHOG00000004575	PUM2	81	88.710	Choloepus_hoffmanni
ENSDORG00000011453	Pum2	89	96.107	ENSCPBG00000019966	PUM2	100	88.503	Chrysemys_picta_bellii
ENSDORG00000011453	Pum2	100	92.150	ENSCANG00000032797	PUM2	100	92.150	Colobus_angolensis_palliatus
ENSDORG00000011453	Pum2	100	91.495	ENSCGRG00001025023	Pum2	100	91.495	Cricetulus_griseus_chok1gshd
ENSDORG00000011453	Pum2	100	91.682	ENSCGRG00000001580	Pum2	100	91.682	Cricetulus_griseus_crigri
ENSDORG00000011453	Pum2	100	84.257	ENSCSEG00000020899	pum2	82	85.747	Cynoglossus_semilaevis
ENSDORG00000011453	Pum2	100	69.493	ENSCVAG00000002426	pum2	100	71.743	Cyprinodon_variegatus
ENSDORG00000011453	Pum2	100	71.324	ENSDARG00000061040	pum2	90	70.876	Danio_rerio
ENSDORG00000011453	Pum2	100	87.698	ENSDNOG00000006733	PUM2	99	87.325	Dasypus_novemcinctus
ENSDORG00000011453	Pum2	85	98.577	ENSETEG00000017683	PUM2	80	98.577	Echinops_telfairi
ENSDORG00000011453	Pum2	73	63.138	ENSEBUG00000014828	pum2	58	72.233	Eptatretus_burgeri
ENSDORG00000011453	Pum2	93	66.042	ENSEBUG00000004435	pum2	90	65.208	Eptatretus_burgeri
ENSDORG00000011453	Pum2	100	91.869	ENSEASG00005009429	PUM2	100	91.869	Equus_asinus_asinus
ENSDORG00000011453	Pum2	100	91.869	ENSECAG00000021930	PUM2	100	95.712	Equus_caballus
ENSDORG00000011453	Pum2	80	96.226	ENSEEUG00000003224	-	74	96.226	Erinaceus_europaeus
ENSDORG00000011453	Pum2	100	68.590	ENSELUG00000014997	pum2	90	70.513	Esox_lucius
ENSDORG00000011453	Pum2	100	91.963	ENSFCAG00000027520	PUM2	100	91.963	Felis_catus
ENSDORG00000011453	Pum2	100	87.395	ENSFALG00000001759	PUM2	100	87.302	Ficedula_albicollis
ENSDORG00000011453	Pum2	100	91.138	ENSFDAG00000019685	PUM2	100	91.138	Fukomys_damarensis
ENSDORG00000011453	Pum2	90	90.511	ENSFHEG00000021596	pum2	97	80.962	Fundulus_heteroclitus
ENSDORG00000011453	Pum2	100	67.094	ENSGMOG00000006903	pum2	100	68.440	Gadus_morhua
ENSDORG00000011453	Pum2	100	87.115	ENSGALG00000016481	PUM2	100	87.021	Gallus_gallus
ENSDORG00000011453	Pum2	90	90.534	ENSGAFG00000013691	pum2	97	81.211	Gambusia_affinis
ENSDORG00000011453	Pum2	100	69.437	ENSGACG00000009670	pum2	100	69.917	Gasterosteus_aculeatus
ENSDORG00000011453	Pum2	100	86.835	ENSGAGG00000020698	PUM2	100	86.461	Gopherus_agassizii
ENSDORG00000011453	Pum2	100	92.243	ENSGGOG00000011374	PUM2	100	92.243	Gorilla_gorilla
ENSDORG00000011453	Pum2	93	85.654	ENSHBUG00000016453	pum2	90	66.854	Haplochromis_burtoni
ENSDORG00000011453	Pum2	100	89.626	ENSHGLG00000007892	PUM2	100	89.533	Heterocephalus_glaber_female
ENSDORG00000011453	Pum2	100	89.169	ENSHGLG00100015510	PUM2	100	89.169	Heterocephalus_glaber_male
ENSDORG00000011453	Pum2	100	71.072	ENSHCOG00000010119	pum2	90	72.089	Hippocampus_comes
ENSDORG00000011453	Pum2	100	92.250	ENSSTOG00000006262	PUM2	100	92.250	Ictidomys_tridecemlineatus
ENSDORG00000011453	Pum2	100	91.597	ENSJJAG00000020969	Pum2	100	91.597	Jaculus_jaculus
ENSDORG00000011453	Pum2	100	80.292	ENSKMAG00000017216	pum2	96	72.594	Kryptolebias_marmoratus
ENSDORG00000011453	Pum2	100	68.750	ENSLBEG00000020488	pum2	90	72.458	Labrus_bergylta
ENSDORG00000011453	Pum2	100	84.358	ENSLACG00000008723	PUM2	89	85.475	Latimeria_chalumnae
ENSDORG00000011453	Pum2	100	81.139	ENSLOCG00000017196	pum2	89	81.139	Lepisosteus_oculatus
ENSDORG00000011453	Pum2	100	91.231	ENSLAFG00000009278	PUM2	100	91.231	Loxodonta_africana
ENSDORG00000011453	Pum2	100	92.150	ENSMFAG00000000492	PUM2	100	92.150	Macaca_fascicularis
ENSDORG00000011453	Pum2	100	92.150	ENSMMUG00000023181	PUM2	100	92.150	Macaca_mulatta
ENSDORG00000011453	Pum2	100	92.150	ENSMNEG00000039659	PUM2	100	92.150	Macaca_nemestrina
ENSDORG00000011453	Pum2	100	92.243	ENSMLEG00000039243	PUM2	100	92.243	Mandrillus_leucophaeus
ENSDORG00000011453	Pum2	100	70.490	ENSMAMG00000006121	pum2	90	73.265	Mastacembelus_armatus
ENSDORG00000011453	Pum2	100	69.797	ENSMZEG00005000791	pum2	89	72.560	Maylandia_zebra
ENSDORG00000011453	Pum2	100	87.115	ENSMGAG00000014040	PUM2	100	87.021	Meleagris_gallopavo
ENSDORG00000011453	Pum2	100	92.150	ENSMAUG00000000311	Pum2	100	92.150	Mesocricetus_auratus
ENSDORG00000011453	Pum2	100	92.617	ENSMICG00000011647	PUM2	100	92.617	Microcebus_murinus
ENSDORG00000011453	Pum2	100	91.776	ENSMOCG00000013663	Pum2	100	91.776	Microtus_ochrogaster
ENSDORG00000011453	Pum2	100	69.549	ENSMMOG00000002975	pum2	100	70.929	Mola_mola
ENSDORG00000011453	Pum2	100	86.338	ENSMODG00000009811	PUM2	100	86.059	Monodelphis_domestica
ENSDORG00000011453	Pum2	90	90.024	ENSMALG00000022313	pum2	97	81.172	Monopterus_albus
ENSDORG00000011453	Pum2	100	91.597	MGP_CAROLIEiJ_G0017603	Pum2	100	91.597	Mus_caroli
ENSDORG00000011453	Pum2	100	91.503	ENSMUSG00000020594	Pum2	100	91.503	Mus_musculus
ENSDORG00000011453	Pum2	100	91.974	MGP_PahariEiJ_G0029361	Pum2	100	91.877	Mus_pahari
ENSDORG00000011453	Pum2	100	91.503	MGP_SPRETEiJ_G0018447	Pum2	100	91.503	Mus_spretus
ENSDORG00000011453	Pum2	100	92.336	ENSMPUG00000013734	PUM2	100	92.336	Mustela_putorius_furo
ENSDORG00000011453	Pum2	100	91.325	ENSMLUG00000007362	PUM2	100	91.325	Myotis_lucifugus
ENSDORG00000011453	Pum2	100	91.589	ENSNGAG00000016665	-	100	91.589	Nannospalax_galili
ENSDORG00000011453	Pum2	99	61.596	ENSNGAG00000016239	-	99	73.939	Nannospalax_galili
ENSDORG00000011453	Pum2	89	65.937	ENSNBRG00000020737	pum2	96	59.833	Neolamprologus_brichardi
ENSDORG00000011453	Pum2	100	92.243	ENSNLEG00000002509	PUM2	94	98.540	Nomascus_leucogenys
ENSDORG00000011453	Pum2	93	84.483	ENSMEUG00000016567	PUM2	93	84.483	Notamacropus_eugenii
ENSDORG00000011453	Pum2	75	76.933	ENSOPRG00000001963	PUM2	79	86.801	Ochotona_princeps
ENSDORG00000011453	Pum2	100	91.503	ENSODEG00000007823	PUM2	100	91.540	Octodon_degus
ENSDORG00000011453	Pum2	100	69.890	ENSONIG00000006119	pum2	90	72.652	Oreochromis_niloticus
ENSDORG00000011453	Pum2	100	91.877	ENSOCUG00000017908	PUM2	100	91.877	Oryctolagus_cuniculus
ENSDORG00000011453	Pum2	90	90.000	ENSORLG00000012611	pum2	97	80.753	Oryzias_latipes
ENSDORG00000011453	Pum2	90	90.000	ENSORLG00020014452	pum2	97	80.962	Oryzias_latipes_hni
ENSDORG00000011453	Pum2	100	69.649	ENSORLG00015009427	pum2	90	70.387	Oryzias_latipes_hsok
ENSDORG00000011453	Pum2	96	90.931	ENSOGAG00000002187	PUM2	100	89.260	Otolemur_garnettii
ENSDORG00000011453	Pum2	100	91.791	ENSOARG00000017236	PUM2	100	91.791	Ovis_aries
ENSDORG00000011453	Pum2	100	92.243	ENSPPAG00000023095	PUM2	100	92.243	Pan_paniscus
ENSDORG00000011453	Pum2	100	91.963	ENSPPRG00000021443	PUM2	100	91.963	Panthera_pardus
ENSDORG00000011453	Pum2	100	91.963	ENSPTIG00000018982	PUM2	100	91.963	Panthera_tigris_altaica
ENSDORG00000011453	Pum2	100	92.243	ENSPTRG00000011692	PUM2	100	92.243	Pan_troglodytes
ENSDORG00000011453	Pum2	100	80.816	ENSPANG00000009393	PUM2	100	98.592	Papio_anubis
ENSDORG00000011453	Pum2	100	74.048	ENSPKIG00000023195	pum2	99	82.524	Paramormyrops_kingsleyae
ENSDORG00000011453	Pum2	100	86.928	ENSPSIG00000011626	PUM2	88	86.835	Pelodiscus_sinensis
ENSDORG00000011453	Pum2	90	89.781	ENSPMGG00000016123	pum2	97	80.753	Periophthalmus_magnuspinnatus
ENSDORG00000011453	Pum2	100	91.402	ENSPEMG00000008357	Pum2	100	91.402	Peromyscus_maniculatus_bairdii
ENSDORG00000011453	Pum2	100	65.014	ENSPMAG00000007038	pum2	99	62.684	Petromyzon_marinus
ENSDORG00000011453	Pum2	94	92.037	ENSPCIG00000022139	PUM2	100	86.551	Phascolarctos_cinereus
ENSDORG00000011453	Pum2	100	68.564	ENSPFOG00000019208	pum2	90	71.119	Poecilia_formosa
ENSDORG00000011453	Pum2	90	90.534	ENSPLAG00000001826	pum2	97	81.211	Poecilia_latipinna
ENSDORG00000011453	Pum2	100	70.083	ENSPMEG00000015766	pum2	87	76.883	Poecilia_mexicana
ENSDORG00000011453	Pum2	90	90.534	ENSPREG00000006905	pum2	97	81.211	Poecilia_reticulata
ENSDORG00000011453	Pum2	100	92.430	ENSPPYG00000012617	PUM2	100	92.430	Pongo_abelii
ENSDORG00000011453	Pum2	69	100.000	ENSPCAG00000008001	PUM2	70	100.000	Procavia_capensis
ENSDORG00000011453	Pum2	99	92.803	ENSPCOG00000019636	PUM2	100	92.803	Propithecus_coquereli
ENSDORG00000011453	Pum2	98	86.420	ENSPVAG00000002920	PUM2	100	86.420	Pteropus_vampyrus
ENSDORG00000011453	Pum2	100	69.982	ENSPNYG00000022901	pum2	89	72.744	Pundamilia_nyererei
ENSDORG00000011453	Pum2	98	70.718	ENSPNAG00000008025	pum2	89	71.169	Pygocentrus_nattereri
ENSDORG00000011453	Pum2	100	91.323	ENSRNOG00000006180	Pum2	100	91.036	Rattus_norvegicus
ENSDORG00000011453	Pum2	100	92.150	ENSRBIG00000044880	PUM2	100	92.150	Rhinopithecus_bieti
ENSDORG00000011453	Pum2	100	92.430	ENSSBOG00000022007	PUM2	100	92.430	Saimiri_boliviensis_boliviensis
ENSDORG00000011453	Pum2	100	83.640	ENSSHAG00000002778	PUM2	100	83.732	Sarcophilus_harrisii
ENSDORG00000011453	Pum2	92	79.501	ENSSFOG00015003476	pum2	88	78.398	Scleropages_formosus
ENSDORG00000011453	Pum2	100	68.848	ENSSMAG00000018236	pum2	100	63.177	Scophthalmus_maximus
ENSDORG00000011453	Pum2	93	73.429	ENSSDUG00000001800	pum2	87	77.034	Seriola_dumerili
ENSDORG00000011453	Pum2	100	69.705	ENSSLDG00000000981	pum2	90	72.744	Seriola_lalandi_dorsalis
ENSDORG00000011453	Pum2	96	82.653	ENSSARG00000010992	PUM2	86	82.540	Sorex_araneus
ENSDORG00000011453	Pum2	99	87.630	ENSSPUG00000017012	PUM2	99	86.686	Sphenodon_punctatus
ENSDORG00000011453	Pum2	89	90.268	ENSSPAG00000022948	pum2	97	80.753	Stegastes_partitus
ENSDORG00000011453	Pum2	100	91.869	ENSSSCG00000008600	PUM2	100	95.406	Sus_scrofa
ENSDORG00000011453	Pum2	100	87.395	ENSTGUG00000013149	PUM2	100	87.302	Taeniopygia_guttata
ENSDORG00000011453	Pum2	100	67.620	ENSTRUG00000018167	pum2	90	67.831	Takifugu_rubripes
ENSDORG00000011453	Pum2	100	69.898	ENSTNIG00000003116	pum2	90	71.837	Tetraodon_nigroviridis
ENSDORG00000011453	Pum2	83	98.577	ENSTBEG00000008729	PUM2	80	98.577	Tupaia_belangeri
ENSDORG00000011453	Pum2	100	91.589	ENSTTRG00000004887	PUM2	100	91.589	Tursiops_truncatus
ENSDORG00000011453	Pum2	75	97.933	ENSUAMG00000008120	PUM2	98	97.933	Ursus_americanus
ENSDORG00000011453	Pum2	100	92.336	ENSUMAG00000023198	PUM2	100	92.336	Ursus_maritimus
ENSDORG00000011453	Pum2	100	91.963	ENSVPAG00000005056	PUM2	100	91.963	Vicugna_pacos
ENSDORG00000011453	Pum2	100	92.243	ENSVVUG00000014829	PUM2	100	92.243	Vulpes_vulpes
ENSDORG00000011453	Pum2	100	75.626	ENSXETG00000008903	pum2	90	76.089	Xenopus_tropicalis
ENSDORG00000011453	Pum2	93	74.070	ENSXCOG00000002556	pum2	87	76.883	Xiphophorus_couchianus
ENSDORG00000011453	Pum2	90	90.534	ENSXMAG00000017682	pum2	97	81.211	Xiphophorus_maculatus