EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSDORG00000011455 (Gene tree)
Gene ID: 105990676
Gene Symbol: Pus1
Alias: A730013B20Rik|MPUS1|mPus1p
Full Name: pseudouridine synthase 1
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Minus strand
Length: 4594 bases
Position: chrKN672412.1:625290-629883
Accession: 105990676
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000024907	PseudoU_synth_1	PF01416.20	6.2e-15	1	1
ENSDORP00000010767	PseudoU_synth_1	PF01416.20	6.6e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000033778	-	1227	-	ENSDORP00000024907	408 (aa)	-	UPI000BAD2A61
ENSDORT00000011455	-	981	XM_013023125	ENSDORP00000010767	326 (aa)	XP_012878579	UPI000BACF144

Gene Model

Click here to download ENSDORG00000011455's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000011455's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000011455	Pus1	100	91.411	ENSG00000177192	PUS1	87	91.411	Homo_sapiens
ENSDORG00000011455	Pus1	99	68.519	ENSAPOG00000007254	pus1	77	68.519	Acanthochromis_polyacanthus
ENSDORG00000011455	Pus1	98	88.750	ENSAMEG00000013715	PUS1	78	88.750	Ailuropoda_melanoleuca
ENSDORG00000011455	Pus1	93	71.617	ENSACIG00000009169	pus1	74	71.617	Amphilophus_citrinellus
ENSDORG00000011455	Pus1	99	69.753	ENSAOCG00000022207	pus1	77	69.753	Amphiprion_ocellaris
ENSDORG00000011455	Pus1	99	69.444	ENSAPEG00000006039	pus1	83	69.444	Amphiprion_percula
ENSDORG00000011455	Pus1	99	68.519	ENSATEG00000020688	pus1	83	68.519	Anabas_testudineus
ENSDORG00000011455	Pus1	93	81.457	ENSACAG00000007367	PUS1	81	81.457	Anolis_carolinensis
ENSDORG00000011455	Pus1	100	91.411	ENSANAG00000036192	PUS1	100	91.411	Aotus_nancymaae
ENSDORG00000011455	Pus1	99	68.519	ENSACLG00000020868	pus1	83	68.519	Astatotilapia_calliptera
ENSDORG00000011455	Pus1	92	74.086	ENSAMXG00000008710	pus1	70	74.086	Astyanax_mexicanus
ENSDORG00000011455	Pus1	100	88.650	ENSBTAG00000012990	PUS1	82	88.650	Bos_taurus
ENSDORG00000011455	Pus1	90	39.286	WBGene00004248	pus-1	80	38.138	Caenorhabditis_elegans
ENSDORG00000011455	Pus1	82	91.011	ENSCJAG00000003720	PUS1	73	91.011	Callithrix_jacchus
ENSDORG00000011455	Pus1	99	87.037	ENSCAFG00000006429	PUS1	80	87.500	Canis_familiaris
ENSDORG00000011455	Pus1	98	87.500	ENSCAFG00020010737	PUS1	74	87.500	Canis_lupus_dingo
ENSDORG00000011455	Pus1	100	88.650	ENSCHIG00000000487	PUS1	82	88.650	Capra_hircus
ENSDORG00000011455	Pus1	100	89.571	ENSTSYG00000032605	PUS1	93	89.571	Carlito_syrichta
ENSDORG00000011455	Pus1	99	90.123	ENSCAPG00000006421	PUS1	100	90.741	Cavia_aperea
ENSDORG00000011455	Pus1	99	89.634	ENSCPOG00000001027	PUS1	81	89.606	Cavia_porcellus
ENSDORG00000011455	Pus1	100	90.798	ENSCCAG00000015879	PUS1	98	84.034	Cebus_capucinus
ENSDORG00000011455	Pus1	100	92.025	ENSCATG00000032870	PUS1	96	85.154	Cercocebus_atys
ENSDORG00000011455	Pus1	99	89.329	ENSCLAG00000011689	PUS1	82	88.693	Chinchilla_lanigera
ENSDORG00000011455	Pus1	100	92.331	ENSCSAG00000001879	PUS1	76	92.331	Chlorocebus_sabaeus
ENSDORG00000011455	Pus1	94	82.792	ENSCPBG00000024715	PUS1	91	80.734	Chrysemys_picta_bellii
ENSDORG00000011455	Pus1	98	43.302	ENSCING00000009426	-	86	42.988	Ciona_intestinalis
ENSDORG00000011455	Pus1	92	42.857	ENSCSAVG00000003751	-	62	42.857	Ciona_savignyi
ENSDORG00000011455	Pus1	100	83.283	ENSCANG00000035561	PUS1	97	78.711	Colobus_angolensis_palliatus
ENSDORG00000011455	Pus1	100	94.479	ENSCGRG00001019592	Pus1	81	94.306	Cricetulus_griseus_chok1gshd
ENSDORG00000011455	Pus1	100	94.479	ENSCGRG00000004048	Pus1	83	94.479	Cricetulus_griseus_crigri
ENSDORG00000011455	Pus1	92	70.861	ENSCSEG00000003629	pus1	72	70.861	Cynoglossus_semilaevis
ENSDORG00000011455	Pus1	99	69.136	ENSCVAG00000001265	pus1	78	69.136	Cyprinodon_variegatus
ENSDORG00000011455	Pus1	93	68.874	ENSDARG00000045562	pus1	99	66.187	Danio_rerio
ENSDORG00000011455	Pus1	99	82.972	ENSDNOG00000045576	PUS1	99	82.972	Dasypus_novemcinctus
ENSDORG00000011455	Pus1	99	46.988	FBgn0038811	PUS1	79	46.988	Drosophila_melanogaster
ENSDORG00000011455	Pus1	91	85.235	ENSETEG00000019160	PUS1	76	83.601	Echinops_telfairi
ENSDORG00000011455	Pus1	91	42.679	ENSEBUG00000000368	-	59	42.679	Eptatretus_burgeri
ENSDORG00000011455	Pus1	100	91.104	ENSEASG00005016535	PUS1	75	91.104	Equus_asinus_asinus
ENSDORG00000011455	Pus1	100	91.104	ENSECAG00000006965	PUS1	81	91.104	Equus_caballus
ENSDORG00000011455	Pus1	99	69.538	ENSELUG00000010424	pus1	81	69.538	Esox_lucius
ENSDORG00000011455	Pus1	98	86.875	ENSFCAG00000010780	PUS1	76	86.875	Felis_catus
ENSDORG00000011455	Pus1	99	81.288	ENSFALG00000008273	PUS1	76	81.288	Ficedula_albicollis
ENSDORG00000011455	Pus1	99	90.769	ENSFDAG00000012518	PUS1	79	90.741	Fukomys_damarensis
ENSDORG00000011455	Pus1	99	68.519	ENSFHEG00000010504	pus1	78	68.519	Fundulus_heteroclitus
ENSDORG00000011455	Pus1	93	68.977	ENSGMOG00000008143	pus1	78	68.977	Gadus_morhua
ENSDORG00000011455	Pus1	99	81.231	ENSGALG00000002354	PUS1	79	81.231	Gallus_gallus
ENSDORG00000011455	Pus1	99	69.444	ENSGAFG00000006578	pus1	78	69.444	Gambusia_affinis
ENSDORG00000011455	Pus1	95	70.192	ENSGACG00000017566	pus1	87	66.667	Gasterosteus_aculeatus
ENSDORG00000011455	Pus1	100	79.205	ENSGAGG00000016730	-	92	79.205	Gopherus_agassizii
ENSDORG00000011455	Pus1	100	90.798	ENSGGOG00000009178	PUS1	96	83.106	Gorilla_gorilla
ENSDORG00000011455	Pus1	99	68.827	ENSHBUG00000001316	pus1	83	68.827	Haplochromis_burtoni
ENSDORG00000011455	Pus1	99	87.963	ENSHGLG00000016086	PUS1	83	87.963	Heterocephalus_glaber_female
ENSDORG00000011455	Pus1	99	87.654	ENSHGLG00100019362	PUS1	83	87.654	Heterocephalus_glaber_male
ENSDORG00000011455	Pus1	100	67.890	ENSHCOG00000014288	pus1	75	67.890	Hippocampus_comes
ENSDORG00000011455	Pus1	92	76.412	ENSIPUG00000010387	pus1	76	76.412	Ictalurus_punctatus
ENSDORG00000011455	Pus1	97	93.671	ENSSTOG00000011245	PUS1	77	92.945	Ictidomys_tridecemlineatus
ENSDORG00000011455	Pus1	100	93.252	ENSJJAG00000000088	Pus1	81	92.883	Jaculus_jaculus
ENSDORG00000011455	Pus1	99	67.593	ENSKMAG00000012702	pus1	78	67.593	Kryptolebias_marmoratus
ENSDORG00000011455	Pus1	99	68.731	ENSLBEG00000002845	pus1	80	68.731	Labrus_bergylta
ENSDORG00000011455	Pus1	95	79.288	ENSLACG00000018598	PUS1	82	76.292	Latimeria_chalumnae
ENSDORG00000011455	Pus1	92	56.811	ENSLACG00000016044	-	91	56.811	Latimeria_chalumnae
ENSDORG00000011455	Pus1	99	76.543	ENSLOCG00000006127	pus1	82	76.543	Lepisosteus_oculatus
ENSDORG00000011455	Pus1	100	80.734	ENSLAFG00000028731	PUS1	88	80.734	Loxodonta_africana
ENSDORG00000011455	Pus1	100	92.025	ENSMFAG00000041194	PUS1	96	85.714	Macaca_fascicularis
ENSDORG00000011455	Pus1	100	90.520	ENSMMUG00000031463	PUS1	96	86.257	Macaca_mulatta
ENSDORG00000011455	Pus1	100	92.331	ENSMNEG00000002814	PUS1	96	85.994	Macaca_nemestrina
ENSDORG00000011455	Pus1	100	92.331	ENSMLEG00000043560	PUS1	100	92.331	Mandrillus_leucophaeus
ENSDORG00000011455	Pus1	99	67.593	ENSMAMG00000007371	pus1	77	67.593	Mastacembelus_armatus
ENSDORG00000011455	Pus1	99	68.827	ENSMZEG00005017746	pus1	77	68.827	Maylandia_zebra
ENSDORG00000011455	Pus1	100	81.402	ENSMGAG00000001958	PUS1	99	81.402	Meleagris_gallopavo
ENSDORG00000011455	Pus1	67	30.126	ENSMGAG00000000851	PUS3	58	30.196	Meleagris_gallopavo
ENSDORG00000011455	Pus1	100	93.558	ENSMAUG00000001482	Pus1	81	93.238	Mesocricetus_auratus
ENSDORG00000011455	Pus1	100	91.239	ENSMICG00000030980	PUS1	82	91.239	Microcebus_murinus
ENSDORG00000011455	Pus1	100	94.785	ENSMOCG00000022311	Pus1	81	94.662	Microtus_ochrogaster
ENSDORG00000011455	Pus1	100	68.502	ENSMMOG00000021022	pus1	83	68.502	Mola_mola
ENSDORG00000011455	Pus1	99	80.061	ENSMODG00000015551	PUS1	73	80.061	Monodelphis_domestica
ENSDORG00000011455	Pus1	93	69.967	ENSMALG00000013202	pus1	73	69.967	Monopterus_albus
ENSDORG00000011455	Pus1	100	94.479	MGP_CAROLIEiJ_G0027551	Pus1	83	94.479	Mus_caroli
ENSDORG00000011455	Pus1	100	94.479	ENSMUSG00000029507	Pus1	83	94.479	Mus_musculus
ENSDORG00000011455	Pus1	100	94.172	MGP_PahariEiJ_G0024133	Pus1	83	94.172	Mus_pahari
ENSDORG00000011455	Pus1	100	94.479	MGP_SPRETEiJ_G0028549	Pus1	83	94.479	Mus_spretus
ENSDORG00000011455	Pus1	98	88.750	ENSMPUG00000002314	PUS1	81	88.750	Mustela_putorius_furo
ENSDORG00000011455	Pus1	100	87.117	ENSMLUG00000015790	PUS1	89	87.117	Myotis_lucifugus
ENSDORG00000011455	Pus1	100	95.399	ENSNGAG00000012976	Pus1	81	95.374	Nannospalax_galili
ENSDORG00000011455	Pus1	99	68.421	ENSNBRG00000020502	pus1	86	68.421	Neolamprologus_brichardi
ENSDORG00000011455	Pus1	99	91.331	ENSNLEG00000008505	PUS1	100	92.744	Nomascus_leucogenys
ENSDORG00000011455	Pus1	93	72.607	ENSMEUG00000002825	PUS1	82	72.607	Notamacropus_eugenii
ENSDORG00000011455	Pus1	94	80.065	ENSOPRG00000002701	-	95	69.945	Ochotona_princeps
ENSDORG00000011455	Pus1	99	89.164	ENSODEG00000008248	PUS1	81	92.857	Octodon_degus
ENSDORG00000011455	Pus1	99	67.781	ENSONIG00000003803	pus1	88	70.192	Oreochromis_niloticus
ENSDORG00000011455	Pus1	98	79.876	ENSOANG00000010619	PUS1	74	79.876	Ornithorhynchus_anatinus
ENSDORG00000011455	Pus1	91	93.289	ENSOCUG00000007310	PUS1	68	92.308	Oryctolagus_cuniculus
ENSDORG00000011455	Pus1	99	69.939	ENSORLG00000010787	pus1	78	69.939	Oryzias_latipes
ENSDORG00000011455	Pus1	99	70.552	ENSORLG00020011483	pus1	78	70.552	Oryzias_latipes_hni
ENSDORG00000011455	Pus1	99	70.859	ENSORLG00015023012	pus1	83	70.859	Oryzias_latipes_hsok
ENSDORG00000011455	Pus1	95	71.613	ENSOMEG00000022655	pus1	73	71.613	Oryzias_melastigma
ENSDORG00000011455	Pus1	100	92.638	ENSOGAG00000008720	PUS1	85	92.638	Otolemur_garnettii
ENSDORG00000011455	Pus1	100	88.344	ENSOARG00000013316	PUS1	75	88.344	Ovis_aries
ENSDORG00000011455	Pus1	100	91.104	ENSPPAG00000040971	PUS1	96	83.106	Pan_paniscus
ENSDORG00000011455	Pus1	98	86.875	ENSPPRG00000015456	PUS1	81	86.875	Panthera_pardus
ENSDORG00000011455	Pus1	91	89.262	ENSPTIG00000004201	PUS1	81	87.742	Panthera_tigris_altaica
ENSDORG00000011455	Pus1	100	90.491	ENSPTRG00000005643	PUS1	96	82.834	Pan_troglodytes
ENSDORG00000011455	Pus1	100	92.025	ENSPANG00000000376	PUS1	96	85.714	Papio_anubis
ENSDORG00000011455	Pus1	93	76.490	ENSPKIG00000019369	pus1	74	72.446	Paramormyrops_kingsleyae
ENSDORG00000011455	Pus1	93	82.781	ENSPSIG00000016432	PUS1	76	79.692	Pelodiscus_sinensis
ENSDORG00000011455	Pus1	94	69.935	ENSPMGG00000004522	pus1	87	69.935	Periophthalmus_magnuspinnatus
ENSDORG00000011455	Pus1	100	95.092	ENSPEMG00000013448	Pus1	81	95.018	Peromyscus_maniculatus_bairdii
ENSDORG00000011455	Pus1	92	59.801	ENSPMAG00000004636	pus1	91	59.801	Petromyzon_marinus
ENSDORG00000011455	Pus1	92	72.333	ENSPCIG00000022609	-	74	71.429	Phascolarctos_cinereus
ENSDORG00000011455	Pus1	99	68.519	ENSPFOG00000019669	pus1	78	68.519	Poecilia_formosa
ENSDORG00000011455	Pus1	99	68.519	ENSPLAG00000002692	-	78	68.519	Poecilia_latipinna
ENSDORG00000011455	Pus1	99	68.519	ENSPLAG00000007185	pus1	78	68.519	Poecilia_latipinna
ENSDORG00000011455	Pus1	99	68.519	ENSPMEG00000006038	pus1	80	68.519	Poecilia_mexicana
ENSDORG00000011455	Pus1	99	68.519	ENSPMEG00000011115	PUS1	78	68.519	Poecilia_mexicana
ENSDORG00000011455	Pus1	99	68.111	ENSPREG00000007231	pus1	90	68.111	Poecilia_reticulata
ENSDORG00000011455	Pus1	100	91.104	ENSPPYG00000005132	PUS1	77	91.104	Pongo_abelii
ENSDORG00000011455	Pus1	80	79.231	ENSPCAG00000009110	-	63	79.231	Procavia_capensis
ENSDORG00000011455	Pus1	100	83.742	ENSPCOG00000015595	PUS1	80	83.742	Propithecus_coquereli
ENSDORG00000011455	Pus1	99	68.519	ENSPNYG00000013571	pus1	77	68.519	Pundamilia_nyererei
ENSDORG00000011455	Pus1	93	75.828	ENSPNAG00000003938	pus1	72	75.828	Pygocentrus_nattereri
ENSDORG00000011455	Pus1	100	93.558	ENSRNOG00000037500	Pus1	77	93.558	Rattus_norvegicus
ENSDORG00000011455	Pus1	100	91.718	ENSRBIG00000043177	PUS1	98	85.154	Rhinopithecus_bieti
ENSDORG00000011455	Pus1	100	91.104	ENSRROG00000039744	PUS1	89	91.118	Rhinopithecus_roxellana
ENSDORG00000011455	Pus1	87	44.554	YPL212C	-	59	38.286	Saccharomyces_cerevisiae
ENSDORG00000011455	Pus1	83	30.178	YGL063W	-	89	30.178	Saccharomyces_cerevisiae
ENSDORG00000011455	Pus1	100	91.411	ENSSBOG00000023593	PUS1	93	91.385	Saimiri_boliviensis_boliviensis
ENSDORG00000011455	Pus1	99	79.141	ENSSHAG00000013193	PUS1	79	78.328	Sarcophilus_harrisii
ENSDORG00000011455	Pus1	93	78.477	ENSSFOG00015003463	pus1	74	74.303	Scleropages_formosus
ENSDORG00000011455	Pus1	100	67.584	ENSSMAG00000019075	pus1	77	67.584	Scophthalmus_maximus
ENSDORG00000011455	Pus1	99	69.444	ENSSDUG00000007102	pus1	77	69.444	Seriola_dumerili
ENSDORG00000011455	Pus1	99	68.827	ENSSLDG00000022850	pus1	77	68.827	Seriola_lalandi_dorsalis
ENSDORG00000011455	Pus1	93	78.289	ENSSARG00000008367	PUS1	98	78.289	Sorex_araneus
ENSDORG00000011455	Pus1	100	79.027	ENSSPUG00000010009	PUS1	82	79.027	Sphenodon_punctatus
ENSDORG00000011455	Pus1	99	68.827	ENSSPAG00000006272	pus1	83	68.827	Stegastes_partitus
ENSDORG00000011455	Pus1	100	88.650	ENSSSCG00000009741	PUS1	82	88.650	Sus_scrofa
ENSDORG00000011455	Pus1	93	83.168	ENSTGUG00000008068	PUS1	92	83.168	Taeniopygia_guttata
ENSDORG00000011455	Pus1	99	67.593	ENSTRUG00000002198	pus1	83	67.492	Takifugu_rubripes
ENSDORG00000011455	Pus1	99	67.077	ENSTNIG00000003942	pus1	82	67.385	Tetraodon_nigroviridis
ENSDORG00000011455	Pus1	99	88.580	ENSTTRG00000000632	PUS1	77	88.580	Tursiops_truncatus
ENSDORG00000011455	Pus1	98	89.688	ENSUAMG00000017197	PUS1	81	89.688	Ursus_americanus
ENSDORG00000011455	Pus1	98	89.375	ENSUMAG00000002831	PUS1	96	89.375	Ursus_maritimus
ENSDORG00000011455	Pus1	50	94.118	ENSVPAG00000009778	-	62	94.118	Vicugna_pacos
ENSDORG00000011455	Pus1	96	88.141	ENSVVUG00000004199	PUS1	72	88.141	Vulpes_vulpes
ENSDORG00000011455	Pus1	90	49.488	ENSXETG00000033640	-	93	47.541	Xenopus_tropicalis
ENSDORG00000011455	Pus1	100	71.865	ENSXETG00000002030	pus1	82	71.865	Xenopus_tropicalis
ENSDORG00000011455	Pus1	99	69.659	ENSXCOG00000004722	pus1	84	69.659	Xiphophorus_couchianus
ENSDORG00000011455	Pus1	99	69.753	ENSXMAG00000000988	pus1	78	69.753	Xiphophorus_maculatus