EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSDORG00000011517 (Gene tree)
Gene ID: 105991845
Gene Symbol: Pnldc1
Alias: LOC240023
Full Name: PARN like%2C ribonuclease domain containing 1
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Minus strand
Length: 17917 bases
Position: chrKN672423.1:5415665-5433581
Accession: 105991845
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000023993	CAF1	PF04857.20	5e-64	1	1
ENSDORP00000010825	CAF1	PF04857.20	1.2e-56	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000028121	-	918	-	ENSDORP00000023993	305 (aa)	-	UPI000BAD104F
ENSDORT00000011518	-	1575	XM_013024590	ENSDORP00000010825	524 (aa)	XP_012880044	UPI000BAD1F4A

Gene Model

Click here to download ENSDORG00000011517's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000011517's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000011517	Pnldc1	99	86.901	ENSG00000146453	PNLDC1	99	79.550	Homo_sapiens
ENSDORG00000011517	Pnldc1	99	86.262	ENSAMEG00000015371	PNLDC1	99	79.473	Ailuropoda_melanoleuca
ENSDORG00000011517	Pnldc1	92	58.419	ENSAPLG00000007014	PNLDC1	97	54.990	Anas_platyrhynchos
ENSDORG00000011517	Pnldc1	99	61.218	ENSACAG00000013667	PNLDC1	99	56.238	Anolis_carolinensis
ENSDORG00000011517	Pnldc1	99	86.581	ENSANAG00000034713	PNLDC1	100	79.377	Aotus_nancymaae
ENSDORG00000011517	Pnldc1	92	88.235	ENSBTAG00000015166	PNLDC1	96	79.568	Bos_taurus
ENSDORG00000011517	Pnldc1	99	85.623	ENSCJAG00000011865	PNLDC1	100	77.715	Callithrix_jacchus
ENSDORG00000011517	Pnldc1	99	88.179	ENSCAFG00000000740	PNLDC1	100	81.086	Canis_familiaris
ENSDORG00000011517	Pnldc1	100	88.217	ENSCAFG00020017742	PNLDC1	93	88.217	Canis_lupus_dingo
ENSDORG00000011517	Pnldc1	99	87.220	ENSCHIG00000003141	PNLDC1	100	76.966	Capra_hircus
ENSDORG00000011517	Pnldc1	99	84.984	ENSTSYG00000005606	PNLDC1	100	78.652	Carlito_syrichta
ENSDORG00000011517	Pnldc1	100	61.977	ENSCAPG00000011893	PNLDC1	100	61.977	Cavia_aperea
ENSDORG00000011517	Pnldc1	100	75.746	ENSCPOG00000019565	PNLDC1	100	75.746	Cavia_porcellus
ENSDORG00000011517	Pnldc1	63	41.071	ENSCCAG00000030245	TOE1	76	41.071	Cebus_capucinus
ENSDORG00000011517	Pnldc1	99	86.901	ENSCCAG00000026232	PNLDC1	100	79.143	Cebus_capucinus
ENSDORG00000011517	Pnldc1	99	86.581	ENSCATG00000033196	PNLDC1	100	79.775	Cercocebus_atys
ENSDORG00000011517	Pnldc1	99	86.262	ENSCLAG00000003228	PNLDC1	99	78.987	Chinchilla_lanigera
ENSDORG00000011517	Pnldc1	95	86.242	ENSCSAG00000012478	PNLDC1	99	79.191	Chlorocebus_sabaeus
ENSDORG00000011517	Pnldc1	99	64.423	ENSCPBG00000004050	PNLDC1	100	60.429	Chrysemys_picta_bellii
ENSDORG00000011517	Pnldc1	91	88.889	ENSCANG00000043076	PNLDC1	97	80.550	Colobus_angolensis_palliatus
ENSDORG00000011517	Pnldc1	99	65.495	ENSCGRG00001011981	-	99	59.475	Cricetulus_griseus_chok1gshd
ENSDORG00000011517	Pnldc1	99	81.789	ENSCGRG00001007470	-	99	75.047	Cricetulus_griseus_chok1gshd
ENSDORG00000011517	Pnldc1	99	69.010	ENSCGRG00000003103	-	99	62.101	Cricetulus_griseus_crigri
ENSDORG00000011517	Pnldc1	99	81.789	ENSCGRG00000010221	-	99	75.047	Cricetulus_griseus_crigri
ENSDORG00000011517	Pnldc1	99	84.713	ENSDNOG00000013709	PNLDC1	100	79.252	Dasypus_novemcinctus
ENSDORG00000011517	Pnldc1	91	74.438	ENSETEG00000007587	PNLDC1	98	74.438	Echinops_telfairi
ENSDORG00000011517	Pnldc1	99	31.348	ENSEBUG00000008118	PNLDC1	59	30.408	Eptatretus_burgeri
ENSDORG00000011517	Pnldc1	100	87.261	ENSEASG00005019029	PNLDC1	100	71.846	Equus_asinus_asinus
ENSDORG00000011517	Pnldc1	99	87.220	ENSECAG00000012898	PNLDC1	100	80.150	Equus_caballus
ENSDORG00000011517	Pnldc1	72	86.878	ENSEEUG00000005717	-	86	78.125	Erinaceus_europaeus
ENSDORG00000011517	Pnldc1	99	87.540	ENSFCAG00000002848	PNLDC1	100	80.337	Felis_catus
ENSDORG00000011517	Pnldc1	94	54.743	ENSFALG00000012081	PNLDC1	99	54.743	Ficedula_albicollis
ENSDORG00000011517	Pnldc1	99	85.623	ENSFDAG00000021334	PNLDC1	100	78.652	Fukomys_damarensis
ENSDORG00000011517	Pnldc1	99	57.692	ENSGALG00000011624	PNLDC1	82	53.318	Gallus_gallus
ENSDORG00000011517	Pnldc1	97	30.240	ENSGACG00000019501	parn	52	30.240	Gasterosteus_aculeatus
ENSDORG00000011517	Pnldc1	99	64.423	ENSGAGG00000015276	PNLDC1	100	62.474	Gopherus_agassizii
ENSDORG00000011517	Pnldc1	99	86.901	ENSGGOG00000014077	PNLDC1	100	79.401	Gorilla_gorilla
ENSDORG00000011517	Pnldc1	99	87.540	ENSHGLG00000006889	PNLDC1	100	80.150	Heterocephalus_glaber_female
ENSDORG00000011517	Pnldc1	99	87.540	ENSHGLG00100018275	PNLDC1	100	80.150	Heterocephalus_glaber_male
ENSDORG00000011517	Pnldc1	99	89.776	ENSSTOG00000005595	PNLDC1	99	84.023	Ictidomys_tridecemlineatus
ENSDORG00000011517	Pnldc1	99	78.491	ENSJJAG00000009937	Pnldc1	99	78.491	Jaculus_jaculus
ENSDORG00000011517	Pnldc1	99	84.345	ENSLAFG00000030189	PNLDC1	92	84.345	Loxodonta_africana
ENSDORG00000011517	Pnldc1	99	87.220	ENSMFAG00000041296	PNLDC1	100	80.337	Macaca_fascicularis
ENSDORG00000011517	Pnldc1	99	87.220	ENSMMUG00000004181	PNLDC1	100	80.337	Macaca_mulatta
ENSDORG00000011517	Pnldc1	99	87.220	ENSMNEG00000034271	PNLDC1	100	80.337	Macaca_nemestrina
ENSDORG00000011517	Pnldc1	99	86.901	ENSMLEG00000044059	PNLDC1	100	76.592	Mandrillus_leucophaeus
ENSDORG00000011517	Pnldc1	92	58.478	ENSMGAG00000012470	PNLDC1	97	54.043	Meleagris_gallopavo
ENSDORG00000011517	Pnldc1	63	39.286	ENSMAUG00000022118	Toe1	56	36.066	Mesocricetus_auratus
ENSDORG00000011517	Pnldc1	100	66.242	ENSMAUG00000012298	Pnldc1	100	62.335	Mesocricetus_auratus
ENSDORG00000011517	Pnldc1	99	88.179	ENSMICG00000008021	PNLDC1	100	79.702	Microcebus_murinus
ENSDORG00000011517	Pnldc1	99	87.859	ENSMOCG00000014287	Pnldc1	100	79.664	Microtus_ochrogaster
ENSDORG00000011517	Pnldc1	99	74.760	ENSMODG00000007420	PNLDC1	99	69.850	Monodelphis_domestica
ENSDORG00000011517	Pnldc1	99	88.179	MGP_CAROLIEiJ_G0021045	Pnldc1	100	80.150	Mus_caroli
ENSDORG00000011517	Pnldc1	99	88.498	ENSMUSG00000073460	Pnldc1	99	88.498	Mus_musculus
ENSDORG00000011517	Pnldc1	99	88.498	MGP_PahariEiJ_G0023361	Pnldc1	100	81.121	Mus_pahari
ENSDORG00000011517	Pnldc1	99	88.498	MGP_SPRETEiJ_G0021975	Pnldc1	100	80.150	Mus_spretus
ENSDORG00000011517	Pnldc1	99	87.540	ENSMPUG00000004920	PNLDC1	99	79.473	Mustela_putorius_furo
ENSDORG00000011517	Pnldc1	99	84.984	ENSMLUG00000000747	PNLDC1	100	79.775	Myotis_lucifugus
ENSDORG00000011517	Pnldc1	99	89.457	ENSNGAG00000017714	Pnldc1	99	81.461	Nannospalax_galili
ENSDORG00000011517	Pnldc1	95	85.906	ENSNLEG00000011282	PNLDC1	99	78.420	Nomascus_leucogenys
ENSDORG00000011517	Pnldc1	61	56.037	ENSMEUG00000011926	-	64	56.037	Notamacropus_eugenii
ENSDORG00000011517	Pnldc1	75	62.609	ENSMEUG00000014042	-	100	56.954	Notamacropus_eugenii
ENSDORG00000011517	Pnldc1	81	78.364	ENSOPRG00000003813	PNLDC1	79	78.364	Ochotona_princeps
ENSDORG00000011517	Pnldc1	99	86.262	ENSODEG00000008047	PNLDC1	100	79.026	Octodon_degus
ENSDORG00000011517	Pnldc1	99	62.102	ENSOANG00000012199	PNLDC1	99	53.471	Ornithorhynchus_anatinus
ENSDORG00000011517	Pnldc1	99	87.540	ENSOCUG00000013867	PNLDC1	100	80.899	Oryctolagus_cuniculus
ENSDORG00000011517	Pnldc1	99	88.179	ENSOGAG00000007331	PNLDC1	100	79.626	Otolemur_garnettii
ENSDORG00000011517	Pnldc1	99	86.901	ENSOARG00000004585	PNLDC1	100	77.154	Ovis_aries
ENSDORG00000011517	Pnldc1	99	86.581	ENSPPAG00000026651	PNLDC1	100	79.213	Pan_paniscus
ENSDORG00000011517	Pnldc1	99	87.220	ENSPPRG00000012854	PNLDC1	100	80.150	Panthera_pardus
ENSDORG00000011517	Pnldc1	98	83.548	ENSPTIG00000011501	PNLDC1	99	75.518	Panthera_tigris_altaica
ENSDORG00000011517	Pnldc1	99	86.581	ENSPTRG00000018762	PNLDC1	100	79.213	Pan_troglodytes
ENSDORG00000011517	Pnldc1	99	87.540	ENSPANG00000022009	PNLDC1	100	80.524	Papio_anubis
ENSDORG00000011517	Pnldc1	82	63.424	ENSPSIG00000011419	PNLDC1	86	63.424	Pelodiscus_sinensis
ENSDORG00000011517	Pnldc1	99	88.179	ENSPEMG00000016301	Pnldc1	99	81.086	Peromyscus_maniculatus_bairdii
ENSDORG00000011517	Pnldc1	97	30.746	ENSPMAG00000003956	parn	62	31.045	Petromyzon_marinus
ENSDORG00000011517	Pnldc1	77	80.769	ENSPCIG00000023412	PNLDC1	98	72.184	Phascolarctos_cinereus
ENSDORG00000011517	Pnldc1	100	86.667	ENSPPYG00000017148	PNLDC1	100	74.953	Pongo_abelii
ENSDORG00000011517	Pnldc1	99	81.150	ENSPCAG00000014169	PNLDC1	99	70.280	Procavia_capensis
ENSDORG00000011517	Pnldc1	99	87.540	ENSPCOG00000025722	PNLDC1	100	79.330	Propithecus_coquereli
ENSDORG00000011517	Pnldc1	99	87.859	ENSPVAG00000005325	PNLDC1	73	80.670	Pteropus_vampyrus
ENSDORG00000011517	Pnldc1	99	87.859	ENSRNOG00000023140	Pnldc1	100	90.000	Rattus_norvegicus
ENSDORG00000011517	Pnldc1	99	87.220	ENSRBIG00000033806	PNLDC1	100	80.337	Rhinopithecus_bieti
ENSDORG00000011517	Pnldc1	91	88.889	ENSRROG00000043919	PNLDC1	97	80.943	Rhinopithecus_roxellana
ENSDORG00000011517	Pnldc1	63	41.071	ENSSBOG00000026044	-	76	41.071	Saimiri_boliviensis_boliviensis
ENSDORG00000011517	Pnldc1	99	87.220	ENSSBOG00000019135	PNLDC1	100	79.401	Saimiri_boliviensis_boliviensis
ENSDORG00000011517	Pnldc1	99	74.760	ENSSHAG00000015192	PNLDC1	97	70.000	Sarcophilus_harrisii
ENSDORG00000011517	Pnldc1	91	64.561	ENSSPUG00000004627	PNLDC1	95	65.888	Sphenodon_punctatus
ENSDORG00000011517	Pnldc1	93	87.329	ENSSSCG00000004046	PNLDC1	99	78.752	Sus_scrofa
ENSDORG00000011517	Pnldc1	91	55.350	ENSTGUG00000011418	PNLDC1	99	55.350	Taeniopygia_guttata
ENSDORG00000011517	Pnldc1	96	69.981	ENSTBEG00000009131	PNLDC1	98	69.981	Tupaia_belangeri
ENSDORG00000011517	Pnldc1	99	84.984	ENSTTRG00000010409	PNLDC1	73	73.779	Tursiops_truncatus
ENSDORG00000011517	Pnldc1	99	79.032	ENSUAMG00000015783	PNLDC1	99	69.832	Ursus_americanus
ENSDORG00000011517	Pnldc1	91	91.007	ENSUMAG00000011903	PNLDC1	99	75.842	Ursus_maritimus
ENSDORG00000011517	Pnldc1	99	88.179	ENSVVUG00000006586	PNLDC1	99	81.020	Vulpes_vulpes