EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSDORG00000011581 (Gene tree)
Gene ID
105986148
Gene Symbol
Pabpc4
Alias
-
Full Name
poly(A) binding protein cytoplasmic 4
Gene Type
protein_coding
Species
Dipodomys_ordii
Status
putative
Strand
Minus strand
Length
14373 bases
Position
chrKN672379.1:1907754-1922126
Accession
105986148
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSDORP00000010884PABPPF00658.181.5e-3111
ENSDORP00000010884RRM_5PF13893.63.5e-0911
ENSDORP00000010884RRM_1PF00076.224e-9214
ENSDORP00000010884RRM_1PF00076.224e-9224
ENSDORP00000010884RRM_1PF00076.224e-9234
ENSDORP00000010884RRM_1PF00076.224e-9244
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSDORT00000011581-2600XM_013016928ENSDORP00000010884644 (aa)XP_012872382A0A1S3F6V8
Gene Model
Click here to download ENSDORG00000011581's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000011581's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSDORG00000011581Pabpc45632.911ENSDORG00000008601Tia18132.911
ENSDORG00000011581Pabpc45834.940ENSDORG00000010437Elavl28634.940
ENSDORG00000011581Pabpc45438.636ENSDORG00000013721Celf17138.636
ENSDORG00000011581Pabpc45737.500ENSDORG00000006455Celf25837.500
ENSDORG00000011581Pabpc45930.952ENSDORG00000012729Elavl49030.625
ENSDORG00000011581Pabpc45775.510ENSDORG00000011362-9875.510
ENSDORG00000011581Pabpc45933.735ENSDORG00000002538Elavl39233.735
ENSDORG00000011581Pabpc45631.250ENSDORG00000010683Tial17530.682
ENSDORG00000011581Pabpc45840.000ENSDORG00000004926-6440.506
ENSDORG00000011581Pabpc45732.000ENSDORG00000008549Rbm197532.000
ENSDORG00000011581Pabpc49977.469ENSDORG00000013935Pabpc19977.469
ENSDORG00000011581Pabpc49863.067ENSDORG00000001067Pabpc1l9963.550
ENSDORG00000011581Pabpc45733.553ENSDORG00000009158Elavl19533.553
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSDORG00000011581Pabpc410099.379ENSG00000090621PABPC4100100.000Homo_sapiens
ENSDORG00000011581Pabpc49981.522ENSAPOG00000001161pabpc410081.930Acanthochromis_polyacanthus
ENSDORG00000011581Pabpc49855.118ENSAMEG00000015083-9954.803Ailuropoda_melanoleuca
ENSDORG00000011581Pabpc410096.515ENSAMEG00000011535-10096.515Ailuropoda_melanoleuca
ENSDORG00000011581Pabpc410081.930ENSACIG00000023343pabpc410081.832Amphilophus_citrinellus
ENSDORG00000011581Pabpc49981.677ENSAOCG00000021529pabpc49190.807Amphiprion_ocellaris
ENSDORG00000011581Pabpc49981.677ENSAPEG00000019196pabpc410081.679Amphiprion_percula
ENSDORG00000011581Pabpc49981.240ENSATEG00000007402pabpc410080.945Anabas_testudineus
ENSDORG00000011581Pabpc49988.491ENSAPLG00000009729-10088.491Anas_platyrhynchos
ENSDORG00000011581Pabpc49987.063ENSACAG00000002544PABPC410087.063Anolis_carolinensis
ENSDORG00000011581Pabpc410097.121ENSANAG00000025079PABPC410097.121Aotus_nancymaae
ENSDORG00000011581Pabpc410081.470ENSACLG00000019558pabpc410082.083Astatotilapia_calliptera
ENSDORG00000011581Pabpc49977.329ENSAMXG00000018779pabpc49976.380Astyanax_mexicanus
ENSDORG00000011581Pabpc45686.826ENSBTAG00000048536-9386.826Bos_taurus
ENSDORG00000011581Pabpc410099.070ENSBTAG00000017125PABPC410099.070Bos_taurus
ENSDORG00000011581Pabpc410096.667ENSCJAG00000002512-10096.667Callithrix_jacchus
ENSDORG00000011581Pabpc47888.327ENSCJAG00000045953-9288.281Callithrix_jacchus
ENSDORG00000011581Pabpc410095.497ENSCAFG00000003081PABPC410095.497Canis_familiaris
ENSDORG00000011581Pabpc410096.667ENSCAFG00020004161PABPC410096.667Canis_lupus_dingo
ENSDORG00000011581Pabpc410096.818ENSCHIG00000019398-10096.818Capra_hircus
ENSDORG00000011581Pabpc410078.571ENSCHIG00000023385-10078.571Capra_hircus
ENSDORG00000011581Pabpc410096.818ENSTSYG00000006532PABPC410096.818Carlito_syrichta
ENSDORG00000011581Pabpc49997.264ENSCAPG00000015984PABPC410097.264Cavia_aperea
ENSDORG00000011581Pabpc410097.273ENSCPOG00000009552PABPC410097.273Cavia_porcellus
ENSDORG00000011581Pabpc410096.818ENSCCAG00000037306PABPC410096.818Cebus_capucinus
ENSDORG00000011581Pabpc410097.121ENSCATG00000042164PABPC410097.121Cercocebus_atys
ENSDORG00000011581Pabpc410096.818ENSCLAG00000011899PABPC410096.818Chinchilla_lanigera
ENSDORG00000011581Pabpc410097.121ENSCSAG00000001135PABPC410097.121Chlorocebus_sabaeus
ENSDORG00000011581Pabpc48497.361ENSCHOG00000005327PABPC48197.361Choloepus_hoffmanni
ENSDORG00000011581Pabpc49988.647ENSCPBG00000001038PABPC410088.647Chrysemys_picta_bellii
ENSDORG00000011581Pabpc49996.928ENSCANG00000034177PABPC410096.928Colobus_angolensis_palliatus
ENSDORG00000011581Pabpc410095.482ENSCGRG00001018166Pabpc410095.482Cricetulus_griseus_chok1gshd
ENSDORG00000011581Pabpc49997.809ENSCGRG00000009777Pabpc410097.809Cricetulus_griseus_crigri
ENSDORG00000011581Pabpc410081.011ENSCSEG00000000130pabpc410080.635Cynoglossus_semilaevis
ENSDORG00000011581Pabpc49981.804ENSCVAG00000019246pabpc410082.481Cyprinodon_variegatus
ENSDORG00000011581Pabpc49982.893ENSDARG00000059259pabpc410082.063Danio_rerio
ENSDORG00000011581Pabpc49896.724ENSDNOG00000018444-9996.724Dasypus_novemcinctus
ENSDORG00000011581Pabpc48662.568ENSETEG00000009172-9962.612Echinops_telfairi
ENSDORG00000011581Pabpc4100100.000ENSETEG00000018453-84100.000Echinops_telfairi
ENSDORG00000011581Pabpc49774.367ENSEBUG00000013782pabpc49974.884Eptatretus_burgeri
ENSDORG00000011581Pabpc49975.000ENSEBUG00000000992pabpc410074.729Eptatretus_burgeri
ENSDORG00000011581Pabpc410097.121ENSEASG00005014119PABPC410097.121Equus_asinus_asinus
ENSDORG00000011581Pabpc410097.121ENSECAG00000009396PABPC410097.121Equus_caballus
ENSDORG00000011581Pabpc410093.636ENSEEUG00000002962PABPC410093.636Erinaceus_europaeus
ENSDORG00000011581Pabpc49982.031ENSELUG00000003195pabpc49981.567Esox_lucius
ENSDORG00000011581Pabpc410096.818ENSFCAG00000015254-10096.818Felis_catus
ENSDORG00000011581Pabpc49987.714ENSFALG00000000543PABPC410087.714Ficedula_albicollis
ENSDORG00000011581Pabpc49067.234ENSFDAG00000010581-10063.040Fukomys_damarensis
ENSDORG00000011581Pabpc410097.121ENSFDAG00000020016-10097.121Fukomys_damarensis
ENSDORG00000011581Pabpc410081.623ENSFHEG00000007548pabpc410082.290Fundulus_heteroclitus
ENSDORG00000011581Pabpc49981.173ENSGMOG00000019025pabpc49980.710Gadus_morhua
ENSDORG00000011581Pabpc49988.802ENSGALG00000003800PABPC410088.802Gallus_gallus
ENSDORG00000011581Pabpc49990.566ENSGAFG00000018195pabpc49895.556Gambusia_affinis
ENSDORG00000011581Pabpc410080.245ENSGACG00000007179pabpc410080.763Gasterosteus_aculeatus
ENSDORG00000011581Pabpc49988.491ENSGAGG00000001888PABPC410088.491Gopherus_agassizii
ENSDORG00000011581Pabpc410096.970ENSGGOG00000004002PABPC410096.970Gorilla_gorilla
ENSDORG00000011581Pabpc410081.623ENSHBUG00000020206pabpc410082.236Haplochromis_burtoni
ENSDORG00000011581Pabpc410099.689ENSHGLG00000011162PABPC410099.689Heterocephalus_glaber_female
ENSDORG00000011581Pabpc410099.689ENSHGLG00100001580PABPC410099.689Heterocephalus_glaber_male
ENSDORG00000011581Pabpc410080.675ENSHCOG00000012694pabpc410080.858Hippocampus_comes
ENSDORG00000011581Pabpc49881.289ENSIPUG00000016620pabpc49980.828Ictalurus_punctatus
ENSDORG00000011581Pabpc410099.534ENSSTOG00000010416PABPC410099.534Ictidomys_tridecemlineatus
ENSDORG00000011581Pabpc410096.894ENSJJAG00000007781Pabpc410096.894Jaculus_jaculus
ENSDORG00000011581Pabpc49981.327ENSKMAG00000013597pabpc49981.510Kryptolebias_marmoratus
ENSDORG00000011581Pabpc410080.793ENSLBEG00000013654pabpc410081.126Labrus_bergylta
ENSDORG00000011581Pabpc49985.781ENSLACG00000011907PABPC410085.781Latimeria_chalumnae
ENSDORG00000011581Pabpc49983.642ENSLOCG00000001877pabpc49982.774Lepisosteus_oculatus
ENSDORG00000011581Pabpc410096.667ENSLAFG00000000151PABPC410096.667Loxodonta_africana
ENSDORG00000011581Pabpc410097.121ENSMFAG00000041481PABPC410097.121Macaca_fascicularis
ENSDORG00000011581Pabpc410097.121ENSMMUG00000007497PABPC410097.121Macaca_mulatta
ENSDORG00000011581Pabpc410096.970ENSMNEG00000043054PABPC410096.970Macaca_nemestrina
ENSDORG00000011581Pabpc410097.121ENSMLEG00000040716PABPC410097.121Mandrillus_leucophaeus
ENSDORG00000011581Pabpc49981.677ENSMAMG00000010025pabpc49981.567Mastacembelus_armatus
ENSDORG00000011581Pabpc410081.317ENSMZEG00005006141pabpc410081.930Maylandia_zebra
ENSDORG00000011581Pabpc49986.905ENSMGAG00000005408PABPC410086.905Meleagris_gallopavo
ENSDORG00000011581Pabpc47089.904ENSMAUG00000001295-9789.904Mesocricetus_auratus
ENSDORG00000011581Pabpc47695.413ENSMAUG00000019763-8495.413Mesocricetus_auratus
ENSDORG00000011581Pabpc45681.287ENSMAUG00000004089-9281.287Mesocricetus_auratus
ENSDORG00000011581Pabpc49978.819ENSMICG00000036729-10081.597Microcebus_murinus
ENSDORG00000011581Pabpc48997.739ENSMICG00000016633-10097.739Microcebus_murinus
ENSDORG00000011581Pabpc410095.934ENSMOCG00000006763Pabpc410095.934Microtus_ochrogaster
ENSDORG00000011581Pabpc410077.795ENSMMOG00000002363pabpc49979.692Mola_mola
ENSDORG00000011581Pabpc45874.011ENSMODG00000018051-9174.011Monodelphis_domestica
ENSDORG00000011581Pabpc49887.752ENSMODG00000017657-10087.367Monodelphis_domestica
ENSDORG00000011581Pabpc49981.115ENSMALG00000011017pabpc410081.069Monopterus_albus
ENSDORG00000011581Pabpc410095.758MGP_CAROLIEiJ_G0026435-10099.291Mus_caroli
ENSDORG00000011581Pabpc49984.801MGP_CAROLIEiJ_G0024864-10085.217Mus_caroli
ENSDORG00000011581Pabpc410098.602ENSMUSG00000011257Pabpc410099.405Mus_musculus
ENSDORG00000011581Pabpc49995.853MGP_PahariEiJ_G0028765Pabpc4100100.000Mus_pahari
ENSDORG00000011581Pabpc49976.969MGP_SPRETEiJ_G0027415Pabpc410099.291Mus_spretus
ENSDORG00000011581Pabpc410096.818ENSMPUG00000014414-10096.818Mustela_putorius_furo
ENSDORG00000011581Pabpc49551.216ENSMPUG00000006836-10051.053Mustela_putorius_furo
ENSDORG00000011581Pabpc410094.410ENSMLUG00000012068PABPC410094.410Myotis_lucifugus
ENSDORG00000011581Pabpc410099.224ENSNGAG00000018292Pabpc410099.224Nannospalax_galili
ENSDORG00000011581Pabpc45892.788ENSNBRG00000009708pabpc49892.788Neolamprologus_brichardi
ENSDORG00000011581Pabpc46686.441ENSNBRG00000010047-7586.441Neolamprologus_brichardi
ENSDORG00000011581Pabpc410099.534ENSNLEG00000011928PABPC410099.534Nomascus_leucogenys
ENSDORG00000011581Pabpc48398.511ENSOPRG00000011984PABPC48698.511Ochotona_princeps
ENSDORG00000011581Pabpc410096.212ENSODEG00000006592-10096.212Octodon_degus
ENSDORG00000011581Pabpc45285.714ENSODEG00000013457-10085.714Octodon_degus
ENSDORG00000011581Pabpc49986.242ENSODEG00000017434-10086.242Octodon_degus
ENSDORG00000011581Pabpc410081.623ENSONIG00000008176pabpc410082.236Oreochromis_niloticus
ENSDORG00000011581Pabpc49988.336ENSOANG00000010001PABPC410088.336Ornithorhynchus_anatinus
ENSDORG00000011581Pabpc49696.519ENSOCUG00000000562PABPC48896.519Oryctolagus_cuniculus
ENSDORG00000011581Pabpc49991.049ENSORLG00000017479pabpc49991.049Oryzias_latipes
ENSDORG00000011581Pabpc49991.049ENSORLG00020018644pabpc49991.049Oryzias_latipes_hni
ENSDORG00000011581Pabpc49991.049ENSORLG00015015042pabpc49991.049Oryzias_latipes_hsok
ENSDORG00000011581Pabpc49981.860ENSOMEG00000014410pabpc49983.468Oryzias_melastigma
ENSDORG00000011581Pabpc410099.073ENSOGAG00000004067PABPC410099.073Otolemur_garnettii
ENSDORG00000011581Pabpc410096.818ENSOARG00000020060PABPC410096.818Ovis_aries
ENSDORG00000011581Pabpc410096.970ENSPPAG00000043625PABPC410096.970Pan_paniscus
ENSDORG00000011581Pabpc410096.818ENSPPRG00000024727PABPC410096.818Panthera_pardus
ENSDORG00000011581Pabpc410096.818ENSPTIG00000005829PABPC410096.818Panthera_tigris_altaica
ENSDORG00000011581Pabpc410096.970ENSPTRG00000000573PABPC410096.970Pan_troglodytes
ENSDORG00000011581Pabpc410096.970ENSPANG00000009484PABPC410096.970Papio_anubis
ENSDORG00000011581Pabpc49982.689ENSPKIG00000025356pabpc49982.589Paramormyrops_kingsleyae
ENSDORG00000011581Pabpc49988.647ENSPSIG00000016892PABPC410088.647Pelodiscus_sinensis
ENSDORG00000011581Pabpc410080.062ENSPMGG00000009073pabpc49979.630Periophthalmus_magnuspinnatus
ENSDORG00000011581Pabpc410093.789ENSPEMG00000024193-9993.789Peromyscus_maniculatus_bairdii
ENSDORG00000011581Pabpc410095.606ENSPEMG00000023569-9995.606Peromyscus_maniculatus_bairdii
ENSDORG00000011581Pabpc48971.186ENSPMAG00000002836pabpc410071.864Petromyzon_marinus
ENSDORG00000011581Pabpc49569.860ENSPMAG00000007885pabpc410069.305Petromyzon_marinus
ENSDORG00000011581Pabpc49894.033ENSPCIG00000020674PABPC410093.810Phascolarctos_cinereus
ENSDORG00000011581Pabpc410081.011ENSPFOG00000002682pabpc410081.985Poecilia_formosa
ENSDORG00000011581Pabpc410080.858ENSPLAG00000010112pabpc410081.985Poecilia_latipinna
ENSDORG00000011581Pabpc49981.493ENSPMEG00000019739pabpc410082.137Poecilia_mexicana
ENSDORG00000011581Pabpc410081.317ENSPREG00000001589pabpc410081.985Poecilia_reticulata
ENSDORG00000011581Pabpc410096.970ENSPPYG00000001506PABPC410096.970Pongo_abelii
ENSDORG00000011581Pabpc410091.818ENSPCAG00000003341PABPC410091.818Procavia_capensis
ENSDORG00000011581Pabpc410096.974ENSPCOG00000023725-10096.974Propithecus_coquereli
ENSDORG00000011581Pabpc49979.626ENSPCOG00000025882-9594.059Propithecus_coquereli
ENSDORG00000011581Pabpc49995.966ENSPVAG00000002187PABPC410095.966Pteropus_vampyrus
ENSDORG00000011581Pabpc410081.470ENSPNYG00000006134pabpc410082.083Pundamilia_nyererei
ENSDORG00000011581Pabpc410081.193ENSPNAG00000024355pabpc410081.595Pygocentrus_nattereri
ENSDORG00000011581Pabpc410098.447ENSRNOG00000015642Pabpc410098.447Rattus_norvegicus
ENSDORG00000011581Pabpc410096.273ENSRNOG00000028592AABR07035074.110096.273Rattus_norvegicus
ENSDORG00000011581Pabpc410097.121ENSRBIG00000039761PABPC410097.121Rhinopithecus_bieti
ENSDORG00000011581Pabpc410097.121ENSRROG00000033355PABPC410097.121Rhinopithecus_roxellana
ENSDORG00000011581Pabpc410096.667ENSSBOG00000026193PABPC410096.667Saimiri_boliviensis_boliviensis
ENSDORG00000011581Pabpc49889.382ENSSHAG00000018139PABPC410088.958Sarcophilus_harrisii
ENSDORG00000011581Pabpc49983.601ENSSFOG00015023514pabpc49983.494Scleropages_formosus
ENSDORG00000011581Pabpc49980.805ENSSMAG00000009007pabpc49981.327Scophthalmus_maximus
ENSDORG00000011581Pabpc49988.046ENSSDUG00000012683pabpc49588.046Seriola_dumerili
ENSDORG00000011581Pabpc49981.211ENSSLDG00000013025pabpc49785.588Seriola_lalandi_dorsalis
ENSDORG00000011581Pabpc410089.697ENSSARG00000000310PABPC410089.697Sorex_araneus
ENSDORG00000011581Pabpc49988.025ENSSPUG00000003204PABPC410087.944Sphenodon_punctatus
ENSDORG00000011581Pabpc49990.562ENSSPAG00000009252pabpc49790.359Stegastes_partitus
ENSDORG00000011581Pabpc410096.970ENSSSCG00000003660-10096.970Sus_scrofa
ENSDORG00000011581Pabpc48951.384ENSSSCG00000036170-9651.384Sus_scrofa
ENSDORG00000011581Pabpc49985.758ENSTGUG00000001266PABPC410085.758Taeniopygia_guttata
ENSDORG00000011581Pabpc410080.740ENSTRUG00000005907pabpc49981.356Takifugu_rubripes
ENSDORG00000011581Pabpc410077.315ENSTNIG00000016902pabpc49977.006Tetraodon_nigroviridis
ENSDORG00000011581Pabpc49985.546ENSTBEG00000009035PABPC410085.546Tupaia_belangeri
ENSDORG00000011581Pabpc49980.268ENSTTRG00000014340PABPC410084.370Tursiops_truncatus
ENSDORG00000011581Pabpc410096.515ENSUAMG00000000303PABPC410096.515Ursus_americanus
ENSDORG00000011581Pabpc410096.515ENSUMAG00000019585PABPC410099.057Ursus_maritimus
ENSDORG00000011581Pabpc48396.429ENSVPAG00000010041PABPC47796.429Vicugna_pacos
ENSDORG00000011581Pabpc410096.667ENSVVUG00000005215PABPC410096.667Vulpes_vulpes
ENSDORG00000011581Pabpc46097.024ENSXETG00000027221-10097.024Xenopus_tropicalis
ENSDORG00000011581Pabpc49980.560ENSXETG00000010946pabpc410080.560Xenopus_tropicalis
ENSDORG00000011581Pabpc49989.351ENSXCOG00000013190pabpc49690.094Xiphophorus_couchianus
ENSDORG00000011581Pabpc410081.164ENSXMAG00000019007pabpc410081.832Xiphophorus_maculatus

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