EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSDORG00000011609 (Gene tree)
Gene ID
105991927
Gene Symbol
Csde1
Alias
-
Full Name
cold shock domain containing E1
Gene Type
protein_coding
Species
Dipodomys_ordii
Status
putative
Strand
Minus strand
Length
43010 bases
Position
chrKN672424.1:5717394-5760403
Accession
105991927
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSDORP00000010910CSDPF00313.224.1e-8615
ENSDORP00000010910CSDPF00313.224.1e-8625
ENSDORP00000010910CSDPF00313.224.1e-8635
ENSDORP00000010910CSDPF00313.224.1e-8645
ENSDORP00000010910CSDPF00313.224.1e-8655
ENSDORP00000021259CSDPF00313.221.1e-6914
ENSDORP00000021259CSDPF00313.221.1e-6924
ENSDORP00000021259CSDPF00313.221.1e-6934
ENSDORP00000021259CSDPF00313.221.1e-6944
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSDORT00000033675-3644-ENSDORP00000021259668 (aa)-UPI000BAD0A85
ENSDORT00000011610-3225XM_013024680ENSDORP00000010910798 (aa)XP_012880134A0A1S3FVT5
Gene Model
Click here to download ENSDORG00000011609's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000011609's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSDORG00000011609Csde110098.353ENSG00000009307CSDE1100100.000Homo_sapiens
ENSDORG00000011609Csde110076.453ENSAPOG00000015538csde19976.453Acanthochromis_polyacanthus
ENSDORG00000011609Csde110097.006ENSAMEG00000017129CSDE19397.006Ailuropoda_melanoleuca
ENSDORG00000011609Csde19177.297ENSACIG00000015175csde110077.297Amphilophus_citrinellus
ENSDORG00000011609Csde110076.453ENSAOCG00000011510csde19976.453Amphiprion_ocellaris
ENSDORG00000011609Csde110077.029ENSAPEG00000007194csde19976.612Amphiprion_percula
ENSDORG00000011609Csde110076.006ENSATEG00000003864csde19976.006Anabas_testudineus
ENSDORG00000011609Csde110090.419ENSAPLG00000008797CSDE19990.419Anas_platyrhynchos
ENSDORG00000011609Csde110091.604ENSACAG00000003120CSDE110091.604Anolis_carolinensis
ENSDORG00000011609Csde19272.695ENSANAG00000028396-9173.469Aotus_nancymaae
ENSDORG00000011609Csde110098.054ENSANAG00000024665CSDE19598.054Aotus_nancymaae
ENSDORG00000011609Csde110076.625ENSACLG00000013296csde110076.625Astatotilapia_calliptera
ENSDORG00000011609Csde110075.595ENSAMXG00000007436csde110073.566Astyanax_mexicanus
ENSDORG00000011609Csde110097.754ENSBTAG00000000678CSDE19997.754Bos_taurus
ENSDORG00000011609Csde110098.054ENSCJAG00000012565CSDE19597.870Callithrix_jacchus
ENSDORG00000011609Csde19898.009ENSCAFG00000009618CSDE19398.009Canis_familiaris
ENSDORG00000011609Csde110098.054ENSCAFG00020000481CSDE19998.054Canis_lupus_dingo
ENSDORG00000011609Csde110097.754ENSCHIG00000017250CSDE19997.754Capra_hircus
ENSDORG00000011609Csde110097.744ENSTSYG00000003747CSDE110097.744Carlito_syrichta
ENSDORG00000011609Csde110091.813ENSCAPG00000015128CSDE110091.813Cavia_aperea
ENSDORG00000011609Csde110092.982ENSCPOG00000040388CSDE110092.982Cavia_porcellus
ENSDORG00000011609Csde19973.274ENSCCAG00000030878-9173.274Cebus_capucinus
ENSDORG00000011609Csde19675.743ENSCCAG00000033677-9975.534Cebus_capucinus
ENSDORG00000011609Csde110098.054ENSCCAG00000036794CSDE110097.870Cebus_capucinus
ENSDORG00000011609Csde110098.353ENSCATG00000036962CSDE19897.862Cercocebus_atys
ENSDORG00000011609Csde110098.120ENSCLAG00000006618CSDE110098.120Chinchilla_lanigera
ENSDORG00000011609Csde110098.120ENSCSAG00000001658CSDE19598.120Chlorocebus_sabaeus
ENSDORG00000011609Csde110098.466ENSCHOG00000000918CSDE18598.466Choloepus_hoffmanni
ENSDORG00000011609Csde110092.105ENSCPBG00000016547CSDE110092.105Chrysemys_picta_bellii
ENSDORG00000011609Csde19841.968ENSCING00000014465-9642.543Ciona_intestinalis
ENSDORG00000011609Csde19741.716ENSCSAVG00000008100-9842.503Ciona_savignyi
ENSDORG00000011609Csde110098.353ENSCANG00000035096CSDE19897.862Colobus_angolensis_palliatus
ENSDORG00000011609Csde110092.322ENSCANG00000031069-10092.322Colobus_angolensis_palliatus
ENSDORG00000011609Csde110098.496ENSCGRG00001016833-10098.496Cricetulus_griseus_chok1gshd
ENSDORG00000011609Csde110079.641ENSCGRG00001014011-10078.321Cricetulus_griseus_chok1gshd
ENSDORG00000011609Csde19997.996ENSCGRG00000002225-10097.996Cricetulus_griseus_crigri
ENSDORG00000011609Csde110078.626ENSCGRG00000005831-9978.626Cricetulus_griseus_crigri
ENSDORG00000011609Csde110075.672ENSCSEG00000002620csde110073.625Cynoglossus_semilaevis
ENSDORG00000011609Csde110076.125ENSCVAG00000001344csde110075.776Cyprinodon_variegatus
ENSDORG00000011609Csde110077.154ENSDARG00000074758csde19883.465Danio_rerio
ENSDORG00000011609Csde110097.608ENSDNOG00000010287-9297.608Dasypus_novemcinctus
ENSDORG00000011609Csde19548.367FBgn0263352Unr7347.791Drosophila_melanogaster
ENSDORG00000011609Csde110076.347ENSETEG00000013678-9973.024Echinops_telfairi
ENSDORG00000011609Csde18984.991ENSETEG00000006280-9984.991Echinops_telfairi
ENSDORG00000011609Csde19398.347ENSETEG00000002491-7498.347Echinops_telfairi
ENSDORG00000011609Csde19067.715ENSETEG00000007109-9967.715Echinops_telfairi
ENSDORG00000011609Csde19957.037ENSEBUG00000008647csde19954.048Eptatretus_burgeri
ENSDORG00000011609Csde110098.054ENSEASG00005006284CSDE110097.995Equus_asinus_asinus
ENSDORG00000011609Csde110098.054ENSECAG00000020885CSDE110097.995Equus_caballus
ENSDORG00000011609Csde19297.906ENSEEUG00000006286CSDE16897.906Erinaceus_europaeus
ENSDORG00000011609Csde110073.887ENSELUG00000015507csde19973.887Esox_lucius
ENSDORG00000011609Csde110098.353ENSFCAG00000029266CSDE19998.353Felis_catus
ENSDORG00000011609Csde110091.479ENSFALG00000003407CSDE110091.479Ficedula_albicollis
ENSDORG00000011609Csde110098.120ENSFDAG00000007882CSDE110098.120Fukomys_damarensis
ENSDORG00000011609Csde110076.280ENSFHEG00000010799csde110076.280Fundulus_heteroclitus
ENSDORG00000011609Csde19976.345ENSGMOG00000012731csde110076.345Gadus_morhua
ENSDORG00000011609Csde19891.432ENSGALG00000002139CSDE19891.432Gallus_gallus
ENSDORG00000011609Csde19174.506ENSGAFG00000005241csde19474.506Gambusia_affinis
ENSDORG00000011609Csde19976.875ENSGACG00000004544csde110076.875Gasterosteus_aculeatus
ENSDORG00000011609Csde110091.729ENSGAGG00000017685CSDE110091.729Gopherus_agassizii
ENSDORG00000011609Csde110098.353ENSGGOG00000002164CSDE19998.353Gorilla_gorilla
ENSDORG00000011609Csde110076.119ENSHBUG00000020315csde19976.119Haplochromis_burtoni
ENSDORG00000011609Csde110088.722ENSHGLG00000009620-10088.972Heterocephalus_glaber_female
ENSDORG00000011609Csde110087.725ENSHGLG00000003829-9987.725Heterocephalus_glaber_female
ENSDORG00000011609Csde19988.864ENSHGLG00000010039-10088.864Heterocephalus_glaber_female
ENSDORG00000011609Csde110088.623ENSHGLG00000008555-10088.623Heterocephalus_glaber_female
ENSDORG00000011609Csde110082.080ENSHGLG00000019549-10082.080Heterocephalus_glaber_female
ENSDORG00000011609Csde19979.925ENSHGLG00000000650-9979.925Heterocephalus_glaber_female
ENSDORG00000011609Csde19985.410ENSHGLG00000007471-9785.410Heterocephalus_glaber_female
ENSDORG00000011609Csde110082.186ENSHGLG00100012072-10082.126Heterocephalus_glaber_male
ENSDORG00000011609Csde19984.230ENSHGLG00100002245-9984.230Heterocephalus_glaber_male
ENSDORG00000011609Csde110098.371ENSHGLG00100019438-10098.371Heterocephalus_glaber_male
ENSDORG00000011609Csde110078.326ENSHGLG00100001846-9978.326Heterocephalus_glaber_male
ENSDORG00000011609Csde19982.371ENSHGLG00100007287-9782.371Heterocephalus_glaber_male
ENSDORG00000011609Csde19988.419ENSHGLG00100006910-10088.419Heterocephalus_glaber_male
ENSDORG00000011609Csde19383.657ENSHGLG00100004195-9983.657Heterocephalus_glaber_male
ENSDORG00000011609Csde19880.846ENSHGLG00100004833-10080.846Heterocephalus_glaber_male
ENSDORG00000011609Csde110075.750ENSHCOG00000004158csde19975.224Hippocampus_comes
ENSDORG00000011609Csde110076.042ENSIPUG00000000355csde110073.317Ictalurus_punctatus
ENSDORG00000011609Csde19982.530ENSSTOG00000030994-10079.901Ictidomys_tridecemlineatus
ENSDORG00000011609Csde18682.258ENSSTOG00000032722-9882.258Ictidomys_tridecemlineatus
ENSDORG00000011609Csde110098.246ENSJJAG00000019571Csde110098.246Jaculus_jaculus
ENSDORG00000011609Csde110076.273ENSKMAG00000005685csde110075.896Kryptolebias_marmoratus
ENSDORG00000011609Csde110076.602ENSLBEG00000014770csde19976.602Labrus_bergylta
ENSDORG00000011609Csde110079.156ENSLACG00000018452CSDE19479.156Latimeria_chalumnae
ENSDORG00000011609Csde110079.725ENSLOCG00000010413csde19479.725Lepisosteus_oculatus
ENSDORG00000011609Csde110096.707ENSLAFG00000007150CSDE19596.707Loxodonta_africana
ENSDORG00000011609Csde110098.353ENSMFAG00000003674CSDE19998.353Macaca_fascicularis
ENSDORG00000011609Csde110098.353ENSMMUG00000001974CSDE19998.353Macaca_mulatta
ENSDORG00000011609Csde110098.353ENSMNEG00000045247CSDE19897.862Macaca_nemestrina
ENSDORG00000011609Csde110098.054ENSMLEG00000038673CSDE19597.870Mandrillus_leucophaeus
ENSDORG00000011609Csde19977.429ENSMAMG00000008821csde19977.429Mastacembelus_armatus
ENSDORG00000011609Csde110076.625ENSMZEG00005021675csde19976.119Maylandia_zebra
ENSDORG00000011609Csde110090.135ENSMGAG00000016381CSDE19891.304Meleagris_gallopavo
ENSDORG00000011609Csde110098.496ENSMAUG00000014031Csde110098.496Mesocricetus_auratus
ENSDORG00000011609Csde110097.754ENSMICG00000002050CSDE19997.991Microcebus_murinus
ENSDORG00000011609Csde110098.496ENSMOCG00000018960Csde110098.496Microtus_ochrogaster
ENSDORG00000011609Csde110076.453ENSMMOG00000015075csde110074.407Mola_mola
ENSDORG00000011609Csde110094.862ENSMODG00000004685CSDE110094.862Monodelphis_domestica
ENSDORG00000011609Csde110076.602ENSMALG00000007132csde110074.407Monopterus_albus
ENSDORG00000011609Csde110098.246MGP_CAROLIEiJ_G0025444Csde110098.246Mus_caroli
ENSDORG00000011609Csde110098.371ENSMUSG00000068823Csde110098.371Mus_musculus
ENSDORG00000011609Csde110098.622MGP_PahariEiJ_G0026888Csde110098.622Mus_pahari
ENSDORG00000011609Csde110098.622MGP_SPRETEiJ_G0026394Csde110098.622Mus_spretus
ENSDORG00000011609Csde19898.212ENSMPUG00000005753CSDE19998.305Mustela_putorius_furo
ENSDORG00000011609Csde110097.455ENSMLUG00000005681CSDE19497.455Myotis_lucifugus
ENSDORG00000011609Csde19970.601ENSNGAG00000012599-10070.601Nannospalax_galili
ENSDORG00000011609Csde110098.371ENSNGAG00000021929Csde110098.371Nannospalax_galili
ENSDORG00000011609Csde110076.119ENSNBRG00000020808csde19976.119Neolamprologus_brichardi
ENSDORG00000011609Csde110098.204ENSNLEG00000004842CSDE19698.204Nomascus_leucogenys
ENSDORG00000011609Csde19895.146ENSMEUG00000002677CSDE19695.146Notamacropus_eugenii
ENSDORG00000011609Csde19896.117ENSOPRG00000005002CSDE17696.117Ochotona_princeps
ENSDORG00000011609Csde110097.744ENSODEG00000007383-10097.744Octodon_degus
ENSDORG00000011609Csde19867.478ENSODEG00000005979-9867.478Octodon_degus
ENSDORG00000011609Csde19976.276ENSONIG00000009309csde19976.276Oreochromis_niloticus
ENSDORG00000011609Csde110079.052ENSOANG00000003346-10079.052Ornithorhynchus_anatinus
ENSDORG00000011609Csde110097.455ENSOCUG00000016438CSDE19597.368Oryctolagus_cuniculus
ENSDORG00000011609Csde110076.269ENSORLG00000000707csde110074.847Oryzias_latipes
ENSDORG00000011609Csde110076.625ENSORLG00020005148csde110074.847Oryzias_latipes_hni
ENSDORG00000011609Csde110076.625ENSORLG00015019415csde110074.847Oryzias_latipes_hsok
ENSDORG00000011609Csde110077.154ENSOMEG00000015656csde110075.366Oryzias_melastigma
ENSDORG00000011609Csde110098.353ENSOGAG00000012127CSDE19498.353Otolemur_garnettii
ENSDORG00000011609Csde110097.904ENSOARG00000020034CSDE19497.904Ovis_aries
ENSDORG00000011609Csde110098.353ENSPPAG00000025861CSDE19998.353Pan_paniscus
ENSDORG00000011609Csde110098.353ENSPPRG00000006747CSDE19598.246Panthera_pardus
ENSDORG00000011609Csde110098.353ENSPTIG00000015468CSDE110098.246Panthera_tigris_altaica
ENSDORG00000011609Csde110098.353ENSPTRG00000033721CSDE110098.120Pan_troglodytes
ENSDORG00000011609Csde110098.353ENSPANG00000018873CSDE19998.353Papio_anubis
ENSDORG00000011609Csde110075.821ENSPKIG00000009459csde110073.625Paramormyrops_kingsleyae
ENSDORG00000011609Csde19694.469ENSPSIG00000003823CSDE19694.469Pelodiscus_sinensis
ENSDORG00000011609Csde110075.708ENSPMGG00000000772csde19975.708Periophthalmus_magnuspinnatus
ENSDORG00000011609Csde110098.496ENSPEMG00000020357-10098.496Peromyscus_maniculatus_bairdii
ENSDORG00000011609Csde110094.987ENSPCIG00000022587CSDE110094.987Phascolarctos_cinereus
ENSDORG00000011609Csde19975.680ENSPFOG00000012664csde110075.776Poecilia_formosa
ENSDORG00000011609Csde19771.121ENSPLAG00000017680csde19371.121Poecilia_latipinna
ENSDORG00000011609Csde19871.017ENSPMEG00000005094csde19671.017Poecilia_mexicana
ENSDORG00000011609Csde110075.871ENSPREG00000011631csde110073.709Poecilia_reticulata
ENSDORG00000011609Csde110097.995ENSPPYG00000000996CSDE110097.995Pongo_abelii
ENSDORG00000011609Csde110097.623ENSPCAG00000014368CSDE19097.623Procavia_capensis
ENSDORG00000011609Csde19083.955ENSPCOG00000008223-9282.482Propithecus_coquereli
ENSDORG00000011609Csde110098.503ENSPCOG00000017893CSDE110098.246Propithecus_coquereli
ENSDORG00000011609Csde110091.018ENSPVAG00000008225CSDE19491.018Pteropus_vampyrus
ENSDORG00000011609Csde110076.119ENSPNYG00000013745csde19976.119Pundamilia_nyererei
ENSDORG00000011609Csde110076.654ENSPNAG00000001958csde110074.032Pygocentrus_nattereri
ENSDORG00000011609Csde110098.496ENSRNOG00000061058Csde110098.496Rattus_norvegicus
ENSDORG00000011609Csde19996.083ENSRBIG00000038088-9996.083Rhinopithecus_bieti
ENSDORG00000011609Csde110092.356ENSRBIG00000038966-9492.481Rhinopithecus_bieti
ENSDORG00000011609Csde110098.353ENSRROG00000043101CSDE19897.630Rhinopithecus_roxellana
ENSDORG00000011609Csde110098.054ENSSBOG00000035592CSDE19597.870Saimiri_boliviensis_boliviensis
ENSDORG00000011609Csde110094.461ENSSHAG00000009831CSDE19994.461Sarcophilus_harrisii
ENSDORG00000011609Csde110075.871ENSSFOG00015007498csde110076.119Scleropages_formosus
ENSDORG00000011609Csde110076.900ENSSMAG00000007203csde19977.061Scophthalmus_maximus
ENSDORG00000011609Csde110076.453ENSSDUG00000015380csde19976.453Seriola_dumerili
ENSDORG00000011609Csde110076.904ENSSLDG00000008819csde110076.904Seriola_lalandi_dorsalis
ENSDORG00000011609Csde110096.856ENSSARG00000000738CSDE19396.856Sorex_araneus
ENSDORG00000011609Csde110091.228ENSSPUG00000008714CSDE110091.228Sphenodon_punctatus
ENSDORG00000011609Csde110077.029ENSSPAG00000000716csde19976.453Stegastes_partitus
ENSDORG00000011609Csde110098.204ENSSSCG00000006752CSDE19998.204Sus_scrofa
ENSDORG00000011609Csde110090.375ENSTGUG00000000972CSDE110090.375Taeniopygia_guttata
ENSDORG00000011609Csde110073.284ENSTRUG00000007996csde19973.284Takifugu_rubripes
ENSDORG00000011609Csde19182.946ENSTNIG00000010878csde19882.946Tetraodon_nigroviridis
ENSDORG00000011609Csde19398.718ENSTBEG00000011880-6298.718Tupaia_belangeri
ENSDORG00000011609Csde110097.305ENSTTRG00000015583CSDE19497.305Tursiops_truncatus
ENSDORG00000011609Csde18993.299ENSUAMG00000024289-9988.650Ursus_americanus
ENSDORG00000011609Csde18998.697ENSUAMG00000021779-10098.071Ursus_americanus
ENSDORG00000011609Csde110091.766ENSUMAG00000009720-9491.766Ursus_maritimus
ENSDORG00000011609Csde19997.862ENSUMAG00000011714-9997.862Ursus_maritimus
ENSDORG00000011609Csde110097.264ENSVPAG00000000749CSDE17997.183Vicugna_pacos
ENSDORG00000011609Csde19097.661ENSVVUG00000009890CSDE19497.661Vulpes_vulpes
ENSDORG00000011609Csde110085.268ENSXETG00000021448csde110085.268Xenopus_tropicalis
ENSDORG00000011609Csde19285.455ENSXCOG00000000035csde19985.455Xiphophorus_couchianus
ENSDORG00000011609Csde110076.875ENSXMAG00000009080csde19975.857Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us