EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSDORG00000012233 (Gene tree)
Gene ID: 105986865
Gene Symbol: Lrpprc
Alias: -
Full Name: leucine rich pentatricopeptide repeat containing
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Minus strand
Length: 95332 bases
Position: chrKN672383.1:4896711-4992042
Accession: 105986865
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000011504	PPR	PF01535.20	3.3e-26	1	4
ENSDORP00000011504	PPR	PF01535.20	3.3e-26	2	4
ENSDORP00000011504	PPR	PF01535.20	3.3e-26	3	4
ENSDORP00000011504	PPR	PF01535.20	3.3e-26	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000012235	-	4281	XM_013017979	ENSDORP00000011504	1393 (aa)	XP_012873433	A0A1S3F9U6

Gene Model

Click here to download ENSDORG00000012233's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000012233's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000012233	Lrpprc	99	51.823	ENSAPOG00000016610	lrpprc	97	52.028	Acanthochromis_polyacanthus
ENSDORG00000012233	Lrpprc	98	81.085	ENSAMEG00000005852	LRPPRC	100	80.861	Ailuropoda_melanoleuca
ENSDORG00000012233	Lrpprc	99	50.324	ENSACIG00000009604	lrpprc	97	50.468	Amphilophus_citrinellus
ENSDORG00000012233	Lrpprc	99	51.678	ENSAOCG00000005886	lrpprc	96	52.381	Amphiprion_ocellaris
ENSDORG00000012233	Lrpprc	99	49.612	ENSAPEG00000002937	lrpprc	97	48.671	Amphiprion_percula
ENSDORG00000012233	Lrpprc	92	57.000	ENSATEG00000010555	lrpprc	95	59.912	Anabas_testudineus
ENSDORG00000012233	Lrpprc	96	62.214	ENSACAG00000029278	LRPPRC	99	60.953	Anolis_carolinensis
ENSDORG00000012233	Lrpprc	100	80.057	ENSANAG00000027440	LRPPRC	100	80.057	Aotus_nancymaae
ENSDORG00000012233	Lrpprc	97	50.734	ENSACLG00000023712	lrpprc	99	50.734	Astatotilapia_calliptera
ENSDORG00000012233	Lrpprc	100	79.128	ENSCJAG00000000794	LRPPRC	100	79.199	Callithrix_jacchus
ENSDORG00000012233	Lrpprc	99	82.915	ENSCHIG00000020173	LRPPRC	99	82.915	Capra_hircus
ENSDORG00000012233	Lrpprc	96	64.118	ENSCAPG00000013631	LRPPRC	100	64.118	Cavia_aperea
ENSDORG00000012233	Lrpprc	87	82.504	ENSCPOG00000000204	LRPPRC	100	82.504	Cavia_porcellus
ENSDORG00000012233	Lrpprc	100	79.011	ENSCCAG00000031900	LRPPRC	100	79.011	Cebus_capucinus
ENSDORG00000012233	Lrpprc	100	79.843	ENSCATG00000014187	LRPPRC	99	79.696	Cercocebus_atys
ENSDORG00000012233	Lrpprc	99	79.456	ENSCLAG00000005203	LRPPRC	99	79.456	Chinchilla_lanigera
ENSDORG00000012233	Lrpprc	100	80.415	ENSCSAG00000013233	LRPPRC	100	80.415	Chlorocebus_sabaeus
ENSDORG00000012233	Lrpprc	84	78.791	ENSCHOG00000003631	LRPPRC	84	78.791	Choloepus_hoffmanni
ENSDORG00000012233	Lrpprc	100	76.085	ENSCANG00000034961	LRPPRC	100	78.017	Colobus_angolensis_palliatus
ENSDORG00000012233	Lrpprc	100	79.197	ENSCGRG00001016261	Lrpprc	100	79.197	Cricetulus_griseus_chok1gshd
ENSDORG00000012233	Lrpprc	100	79.197	ENSCGRG00000004072	Lrpprc	100	79.197	Cricetulus_griseus_crigri
ENSDORG00000012233	Lrpprc	99	42.230	ENSCSEG00000003850	lrpprc	83	53.207	Cynoglossus_semilaevis
ENSDORG00000012233	Lrpprc	99	51.278	ENSCVAG00000012967	lrpprc	98	51.351	Cyprinodon_variegatus
ENSDORG00000012233	Lrpprc	96	50.111	ENSDARG00000043970	lrpprc	93	50.111	Danio_rerio
ENSDORG00000012233	Lrpprc	100	79.513	ENSDNOG00000012594	-	100	79.513	Dasypus_novemcinctus
ENSDORG00000012233	Lrpprc	82	59.703	ENSDNOG00000032336	-	100	59.703	Dasypus_novemcinctus
ENSDORG00000012233	Lrpprc	99	78.536	ENSETEG00000006657	LRPPRC	99	78.536	Echinops_telfairi
ENSDORG00000012233	Lrpprc	87	68.675	ENSEEUG00000012340	LRPPRC	93	68.675	Erinaceus_europaeus
ENSDORG00000012233	Lrpprc	96	50.515	ENSELUG00000012803	lrpprc	99	50.515	Esox_lucius
ENSDORG00000012233	Lrpprc	99	84.003	ENSFCAG00000013468	LRPPRC	100	84.003	Felis_catus
ENSDORG00000012233	Lrpprc	96	56.134	ENSFALG00000012738	LRPPRC	99	56.134	Ficedula_albicollis
ENSDORG00000012233	Lrpprc	100	79.000	ENSFDAG00000015328	LRPPRC	100	78.929	Fukomys_damarensis
ENSDORG00000012233	Lrpprc	99	50.563	ENSFHEG00000019604	lrpprc	96	51.092	Fundulus_heteroclitus
ENSDORG00000012233	Lrpprc	97	50.110	ENSGMOG00000008337	lrpprc	97	50.110	Gadus_morhua
ENSDORG00000012233	Lrpprc	99	50.422	ENSGAFG00000001455	lrpprc	99	50.317	Gambusia_affinis
ENSDORG00000012233	Lrpprc	99	50.640	ENSGACG00000010679	lrpprc	99	51.479	Gasterosteus_aculeatus
ENSDORG00000012233	Lrpprc	99	51.437	ENSHBUG00000000393	lrpprc	93	52.670	Haplochromis_burtoni
ENSDORG00000012233	Lrpprc	100	80.200	ENSHGLG00000006123	LRPPRC	100	80.343	Heterocephalus_glaber_female
ENSDORG00000012233	Lrpprc	60	81.655	ENSHGLG00100005960	-	100	81.894	Heterocephalus_glaber_male
ENSDORG00000012233	Lrpprc	96	51.187	ENSHCOG00000002107	lrpprc	96	51.190	Hippocampus_comes
ENSDORG00000012233	Lrpprc	97	52.525	ENSIPUG00000009406	lrpprc	96	52.525	Ictalurus_punctatus
ENSDORG00000012233	Lrpprc	100	85.735	ENSSTOG00000011185	LRPPRC	100	85.520	Ictidomys_tridecemlineatus
ENSDORG00000012233	Lrpprc	100	82.066	ENSJJAG00000020475	Lrpprc	100	82.066	Jaculus_jaculus
ENSDORG00000012233	Lrpprc	96	47.938	ENSKMAG00000003287	lrpprc	82	47.938	Kryptolebias_marmoratus
ENSDORG00000012233	Lrpprc	99	46.499	ENSLBEG00000023225	lrpprc	86	59.368	Labrus_bergylta
ENSDORG00000012233	Lrpprc	100	60.836	ENSLACG00000014030	LRPPRC	99	60.572	Latimeria_chalumnae
ENSDORG00000012233	Lrpprc	97	58.781	ENSLOCG00000016390	lrpprc	92	59.333	Lepisosteus_oculatus
ENSDORG00000012233	Lrpprc	99	74.212	ENSLAFG00000008614	LRPPRC	99	74.212	Loxodonta_africana
ENSDORG00000012233	Lrpprc	100	80.057	ENSMFAG00000041560	LRPPRC	99	80.076	Macaca_fascicularis
ENSDORG00000012233	Lrpprc	99	78.342	ENSMMUG00000019841	LRPPRC	100	81.083	Macaca_mulatta
ENSDORG00000012233	Lrpprc	100	80.200	ENSMNEG00000031613	LRPPRC	100	80.200	Macaca_nemestrina
ENSDORG00000012233	Lrpprc	98	48.135	ENSMAMG00000021835	lrpprc	95	49.479	Mastacembelus_armatus
ENSDORG00000012233	Lrpprc	99	51.821	ENSMZEG00005027379	lrpprc	95	52.816	Maylandia_zebra
ENSDORG00000012233	Lrpprc	100	79.770	ENSMAUG00000012118	Lrpprc	100	79.770	Mesocricetus_auratus
ENSDORG00000012233	Lrpprc	99	83.417	ENSMICG00000010486	LRPPRC	99	83.417	Microcebus_murinus
ENSDORG00000012233	Lrpprc	100	81.492	ENSMOCG00000006048	Lrpprc	100	81.492	Microtus_ochrogaster
ENSDORG00000012233	Lrpprc	99	50.000	ENSMMOG00000007830	lrpprc	99	49.502	Mola_mola
ENSDORG00000012233	Lrpprc	96	68.514	ENSMODG00000000648	LRPPRC	99	68.514	Monodelphis_domestica
ENSDORG00000012233	Lrpprc	99	49.683	ENSMALG00000001271	lrpprc	99	49.719	Monopterus_albus
ENSDORG00000012233	Lrpprc	99	80.802	ENSMPUG00000011800	LRPPRC	99	82.773	Mustela_putorius_furo
ENSDORG00000012233	Lrpprc	99	82.209	ENSMLUG00000010575	LRPPRC	99	82.209	Myotis_lucifugus
ENSDORG00000012233	Lrpprc	100	81.636	ENSNGAG00000013069	Lrpprc	100	81.636	Nannospalax_galili
ENSDORG00000012233	Lrpprc	94	49.886	ENSNBRG00000013202	lrpprc	98	56.287	Neolamprologus_brichardi
ENSDORG00000012233	Lrpprc	100	78.781	ENSNLEG00000016782	LRPPRC	100	78.781	Nomascus_leucogenys
ENSDORG00000012233	Lrpprc	93	77.466	ENSOPRG00000016774	LRPPRC	93	77.466	Ochotona_princeps
ENSDORG00000012233	Lrpprc	100	81.420	ENSODEG00000011211	LRPPRC	100	81.420	Octodon_degus
ENSDORG00000012233	Lrpprc	99	51.367	ENSONIG00000000917	lrpprc	96	52.437	Oreochromis_niloticus
ENSDORG00000012233	Lrpprc	54	62.978	ENSOANG00000014670	-	99	63.505	Ornithorhynchus_anatinus
ENSDORG00000012233	Lrpprc	99	84.350	ENSOCUG00000015046	LRPPRC	96	84.350	Oryctolagus_cuniculus
ENSDORG00000012233	Lrpprc	99	49.293	ENSORLG00000004605	lrpprc	99	47.871	Oryzias_latipes
ENSDORG00000012233	Lrpprc	91	52.407	ENSORLG00020012536	lrpprc	99	51.390	Oryzias_latipes_hni
ENSDORG00000012233	Lrpprc	99	49.153	ENSORLG00015018270	lrpprc	95	57.883	Oryzias_latipes_hsok
ENSDORG00000012233	Lrpprc	100	79.498	ENSOGAG00000012798	LRPPRC	100	79.642	Otolemur_garnettii
ENSDORG00000012233	Lrpprc	99	83.226	ENSOARG00000006522	LRPPRC	99	83.226	Ovis_aries
ENSDORG00000012233	Lrpprc	100	76.819	ENSPPAG00000040876	LRPPRC	100	76.819	Pan_paniscus
ENSDORG00000012233	Lrpprc	99	83.572	ENSPPRG00000006578	LRPPRC	100	83.572	Panthera_pardus
ENSDORG00000012233	Lrpprc	97	84.160	ENSPTIG00000000933	LRPPRC	97	84.160	Panthera_tigris_altaica
ENSDORG00000012233	Lrpprc	100	79.140	ENSPTRG00000011880	LRPPRC	100	79.140	Pan_troglodytes
ENSDORG00000012233	Lrpprc	100	79.914	ENSPANG00000020731	LRPPRC	99	80.076	Papio_anubis
ENSDORG00000012233	Lrpprc	90	56.152	ENSPKIG00000022232	lrpprc	97	56.152	Paramormyrops_kingsleyae
ENSDORG00000012233	Lrpprc	61	65.268	ENSPSIG00000006830	-	98	65.268	Pelodiscus_sinensis
ENSDORG00000012233	Lrpprc	67	46.334	ENSPMGG00000016597	lrpprc	96	46.334	Periophthalmus_magnuspinnatus
ENSDORG00000012233	Lrpprc	94	45.468	ENSPMAG00000002147	lrpprc	99	45.468	Petromyzon_marinus
ENSDORG00000012233	Lrpprc	99	50.318	ENSPFOG00000011227	lrpprc	99	50.000	Poecilia_formosa
ENSDORG00000012233	Lrpprc	99	50.106	ENSPLAG00000004018	lrpprc	99	49.788	Poecilia_latipinna
ENSDORG00000012233	Lrpprc	99	50.459	ENSPMEG00000016425	lrpprc	99	50.141	Poecilia_mexicana
ENSDORG00000012233	Lrpprc	99	50.106	ENSPREG00000003662	lrpprc	99	49.789	Poecilia_reticulata
ENSDORG00000012233	Lrpprc	58	79.826	ENSPPYG00000029532	-	100	79.826	Pongo_abelii
ENSDORG00000012233	Lrpprc	85	75.648	ENSPCAG00000001430	LRPPRC	84	75.648	Procavia_capensis
ENSDORG00000012233	Lrpprc	99	80.201	ENSPVAG00000002007	LRPPRC	100	80.201	Pteropus_vampyrus
ENSDORG00000012233	Lrpprc	99	49.540	ENSPNYG00000000756	lrpprc	99	49.469	Pundamilia_nyererei
ENSDORG00000012233	Lrpprc	97	54.717	ENSPNAG00000002895	lrpprc	96	54.717	Pygocentrus_nattereri
ENSDORG00000012233	Lrpprc	100	79.986	ENSRNOG00000005877	Lrpprc	100	80.273	Rattus_norvegicus
ENSDORG00000012233	Lrpprc	100	77.896	ENSRBIG00000031552	LRPPRC	100	77.896	Rhinopithecus_bieti
ENSDORG00000012233	Lrpprc	100	79.656	ENSSBOG00000011807	LRPPRC	100	79.728	Saimiri_boliviensis_boliviensis
ENSDORG00000012233	Lrpprc	96	66.196	ENSSHAG00000018725	LRPPRC	99	66.196	Sarcophilus_harrisii
ENSDORG00000012233	Lrpprc	99	51.077	ENSSFOG00015001042	lrpprc	95	51.855	Scleropages_formosus
ENSDORG00000012233	Lrpprc	99	51.161	ENSSDUG00000019062	lrpprc	99	51.020	Seriola_dumerili
ENSDORG00000012233	Lrpprc	99	43.001	ENSSLDG00000023028	lrpprc	99	44.713	Seriola_lalandi_dorsalis
ENSDORG00000012233	Lrpprc	87	70.758	ENSSARG00000000426	LRPPRC	100	70.758	Sorex_araneus
ENSDORG00000012233	Lrpprc	99	47.368	ENSSPAG00000000162	lrpprc	95	48.483	Stegastes_partitus
ENSDORG00000012233	Lrpprc	99	82.496	ENSSSCG00000008452	LRPPRC	99	82.496	Sus_scrofa
ENSDORG00000012233	Lrpprc	94	55.800	ENSTGUG00000003759	LRPPRC	100	55.800	Taeniopygia_guttata
ENSDORG00000012233	Lrpprc	91	51.457	ENSTRUG00000008409	lrpprc	93	52.188	Takifugu_rubripes
ENSDORG00000012233	Lrpprc	99	50.390	ENSTNIG00000007470	lrpprc	99	51.513	Tetraodon_nigroviridis
ENSDORG00000012233	Lrpprc	99	80.631	ENSTTRG00000006403	LRPPRC	100	80.631	Tursiops_truncatus
ENSDORG00000012233	Lrpprc	96	77.530	ENSVPAG00000008993	LRPPRC	99	77.530	Vicugna_pacos
ENSDORG00000012233	Lrpprc	98	60.203	ENSXETG00000009296	lrpprc	98	60.408	Xenopus_tropicalis
ENSDORG00000012233	Lrpprc	95	47.988	ENSXCOG00000013343	lrpprc	88	55.631	Xiphophorus_couchianus
ENSDORG00000012233	Lrpprc	96	51.325	ENSXMAG00000018108	lrpprc	98	50.536	Xiphophorus_maculatus