EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDORG00000012331 (Gene tree)
Gene ID: 105995879
Gene Symbol: Smarcad1
Alias: -
Full Name: SWI/SNF-related%2C matrix-associated actin-dependent regulator of chromatin%2C subfamily a%2C containing DEAD/H box 1
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Plus strand
Length: 58035 bases
Position: chrKN672468.1:6036111-6094145
Accession: 105995879
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000011595	ResIII	PF04851.15	4.5e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000012334	-	4940	XM_013029786	ENSDORP00000011595	1024 (aa)	XP_012885240	A0A1S3G971

Gene Model

Click here to download ENSDORG00000012331's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000012331's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDORG00000012331	Smarcad1	50	35.225	ENSDORG00000013555	Chd1l	50	35.225
ENSDORG00000012331	Smarcad1	51	38.645	ENSDORG00000011812	Hells	67	38.251

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000012331	Smarcad1	100	93.100	ENSG00000163104	SMARCAD1	100	97.819	Homo_sapiens
ENSDORG00000012331	Smarcad1	68	61.756	ENSAPOG00000011446	smarcad1a	66	61.196	Acanthochromis_polyacanthus
ENSDORG00000012331	Smarcad1	100	92.241	ENSAMEG00000005844	SMARCAD1	100	92.241	Ailuropoda_melanoleuca
ENSDORG00000012331	Smarcad1	68	68.401	ENSACIG00000018326	smarcad1a	100	68.401	Amphilophus_citrinellus
ENSDORG00000012331	Smarcad1	100	62.216	ENSAOCG00000019762	smarcad1a	96	61.227	Amphiprion_ocellaris
ENSDORG00000012331	Smarcad1	100	62.358	ENSAPEG00000003889	smarcad1a	96	61.506	Amphiprion_percula
ENSDORG00000012331	Smarcad1	85	62.771	ENSATEG00000015608	smarcad1a	93	62.304	Anabas_testudineus
ENSDORG00000012331	Smarcad1	93	70.829	ENSAPLG00000004630	SMARCAD1	100	71.546	Anas_platyrhynchos
ENSDORG00000012331	Smarcad1	100	68.925	ENSACAG00000013554	SMARCAD1	100	69.380	Anolis_carolinensis
ENSDORG00000012331	Smarcad1	100	92.629	ENSANAG00000020488	SMARCAD1	99	94.352	Aotus_nancymaae
ENSDORG00000012331	Smarcad1	98	62.393	ENSACLG00000017063	smarcad1a	99	62.393	Astatotilapia_calliptera
ENSDORG00000012331	Smarcad1	69	60.986	ENSAMXG00000015470	smarcad1a	98	60.986	Astyanax_mexicanus
ENSDORG00000012331	Smarcad1	79	59.179	ENSAMXG00000019130	smarcad1b	85	60.652	Astyanax_mexicanus
ENSDORG00000012331	Smarcad1	100	91.667	ENSBTAG00000017061	SMARCAD1	100	91.667	Bos_taurus
ENSDORG00000012331	Smarcad1	62	42.879	WBGene00010845	M03C11.8	63	42.857	Caenorhabditis_elegans
ENSDORG00000012331	Smarcad1	100	92.996	ENSCJAG00000006778	SMARCAD1	100	92.996	Callithrix_jacchus
ENSDORG00000012331	Smarcad1	100	92.047	ENSCAFG00000010026	SMARCAD1	100	92.047	Canis_familiaris
ENSDORG00000012331	Smarcad1	87	94.157	ENSCAFG00020003994	SMARCAD1	100	94.157	Canis_lupus_dingo
ENSDORG00000012331	Smarcad1	100	91.950	ENSCHIG00000012905	SMARCAD1	100	91.950	Capra_hircus
ENSDORG00000012331	Smarcad1	100	92.427	ENSTSYG00000002706	SMARCAD1	100	92.427	Carlito_syrichta
ENSDORG00000012331	Smarcad1	90	76.674	ENSCAPG00000016744	SMARCAD1	96	77.332	Cavia_aperea
ENSDORG00000012331	Smarcad1	100	90.988	ENSCPOG00000011398	SMARCAD1	100	90.988	Cavia_porcellus
ENSDORG00000012331	Smarcad1	100	92.614	ENSCCAG00000022264	SMARCAD1	100	97.483	Cebus_capucinus
ENSDORG00000012331	Smarcad1	100	93.100	ENSCATG00000035663	SMARCAD1	100	94.713	Cercocebus_atys
ENSDORG00000012331	Smarcad1	82	95.119	ENSCSAG00000004186	SMARCAD1	100	95.119	Chlorocebus_sabaeus
ENSDORG00000012331	Smarcad1	100	71.783	ENSCPBG00000013203	SMARCAD1	100	72.430	Chrysemys_picta_bellii
ENSDORG00000012331	Smarcad1	64	49.925	ENSCING00000001688	-	99	49.925	Ciona_intestinalis
ENSDORG00000012331	Smarcad1	100	93.100	ENSCANG00000003556	SMARCAD1	100	97.819	Colobus_angolensis_palliatus
ENSDORG00000012331	Smarcad1	100	90.175	ENSCGRG00001015056	Smarcad1	100	90.175	Cricetulus_griseus_chok1gshd
ENSDORG00000012331	Smarcad1	100	90.175	ENSCGRG00000014087	Smarcad1	100	90.175	Cricetulus_griseus_crigri
ENSDORG00000012331	Smarcad1	98	59.467	ENSCSEG00000014419	-	100	46.425	Cynoglossus_semilaevis
ENSDORG00000012331	Smarcad1	100	60.567	ENSCSEG00000017903	smarcad1a	100	46.797	Cynoglossus_semilaevis
ENSDORG00000012331	Smarcad1	100	50.000	ENSDARG00000014041	smarcad1a	100	49.719	Danio_rerio
ENSDORG00000012331	Smarcad1	78	57.635	ENSDARG00000073721	smarcad1b	82	59.264	Danio_rerio
ENSDORG00000012331	Smarcad1	100	91.448	ENSDNOG00000000806	-	100	91.448	Dasypus_novemcinctus
ENSDORG00000012331	Smarcad1	63	46.000	FBgn0032157	Etl1	80	45.015	Drosophila_melanogaster
ENSDORG00000012331	Smarcad1	62	46.166	ENSEBUG00000003969	smarcad1a	95	46.753	Eptatretus_burgeri
ENSDORG00000012331	Smarcad1	100	92.338	ENSEASG00005012382	SMARCAD1	100	92.338	Equus_asinus_asinus
ENSDORG00000012331	Smarcad1	100	92.338	ENSECAG00000011562	SMARCAD1	100	92.338	Equus_caballus
ENSDORG00000012331	Smarcad1	100	52.425	ENSELUG00000018535	smarcad1a	100	52.425	Esox_lucius
ENSDORG00000012331	Smarcad1	79	57.488	ENSELUG00000019154	smarcad1b	79	59.079	Esox_lucius
ENSDORG00000012331	Smarcad1	100	92.233	ENSFCAG00000003958	SMARCAD1	100	97.483	Felis_catus
ENSDORG00000012331	Smarcad1	100	66.827	ENSFALG00000006089	SMARCAD1	100	66.956	Ficedula_albicollis
ENSDORG00000012331	Smarcad1	100	91.642	ENSFDAG00000017027	SMARCAD1	100	91.642	Fukomys_damarensis
ENSDORG00000012331	Smarcad1	66	64.793	ENSFHEG00000012778	smarcad1a	67	61.330	Fundulus_heteroclitus
ENSDORG00000012331	Smarcad1	86	57.320	ENSGMOG00000018995	smarcad1a	99	56.433	Gadus_morhua
ENSDORG00000012331	Smarcad1	77	73.325	ENSGALG00000037339	SMARCAD1	94	73.946	Gallus_gallus
ENSDORG00000012331	Smarcad1	62	66.667	ENSGAFG00000013498	smarcad1a	60	66.667	Gambusia_affinis
ENSDORG00000012331	Smarcad1	85	57.907	ENSGACG00000007327	smarcad1a	98	57.793	Gasterosteus_aculeatus
ENSDORG00000012331	Smarcad1	100	72.517	ENSGAGG00000008582	SMARCAD1	100	72.780	Gopherus_agassizii
ENSDORG00000012331	Smarcad1	100	93.197	ENSGGOG00000023001	SMARCAD1	100	93.197	Gorilla_gorilla
ENSDORG00000012331	Smarcad1	98	62.235	ENSHBUG00000011042	smarcad1a	96	62.235	Haplochromis_burtoni
ENSDORG00000012331	Smarcad1	100	92.225	ENSHGLG00000005070	SMARCAD1	100	92.225	Heterocephalus_glaber_female
ENSDORG00000012331	Smarcad1	100	92.225	ENSHGLG00100006812	SMARCAD1	100	92.225	Heterocephalus_glaber_male
ENSDORG00000012331	Smarcad1	99	63.453	ENSHCOG00000007848	smarcad1a	65	59.028	Hippocampus_comes
ENSDORG00000012331	Smarcad1	76	64.945	ENSIPUG00000000242	smarcad1a	90	63.111	Ictalurus_punctatus
ENSDORG00000012331	Smarcad1	81	57.348	ENSIPUG00000022817	smarcad1b	89	57.467	Ictalurus_punctatus
ENSDORG00000012331	Smarcad1	100	92.816	ENSSTOG00000001227	SMARCAD1	100	92.816	Ictidomys_tridecemlineatus
ENSDORG00000012331	Smarcad1	100	91.642	ENSJJAG00000022342	Smarcad1	100	91.642	Jaculus_jaculus
ENSDORG00000012331	Smarcad1	64	63.678	ENSKMAG00000021351	smarcad1a	65	60.826	Kryptolebias_marmoratus
ENSDORG00000012331	Smarcad1	100	55.126	ENSLOCG00000012909	smarcad1a	100	55.780	Lepisosteus_oculatus
ENSDORG00000012331	Smarcad1	100	90.185	ENSLAFG00000000040	SMARCAD1	100	90.185	Loxodonta_africana
ENSDORG00000012331	Smarcad1	100	92.809	ENSMFAG00000042606	SMARCAD1	100	94.488	Macaca_fascicularis
ENSDORG00000012331	Smarcad1	87	94.488	ENSMMUG00000022242	SMARCAD1	100	94.488	Macaca_mulatta
ENSDORG00000012331	Smarcad1	100	92.711	ENSMNEG00000038117	SMARCAD1	100	97.651	Macaca_nemestrina
ENSDORG00000012331	Smarcad1	100	93.100	ENSMLEG00000038333	SMARCAD1	100	97.819	Mandrillus_leucophaeus
ENSDORG00000012331	Smarcad1	99	61.667	ENSMAMG00000000933	smarcad1a	96	61.667	Mastacembelus_armatus
ENSDORG00000012331	Smarcad1	98	62.393	ENSMZEG00005005203	smarcad1a	99	62.393	Maylandia_zebra
ENSDORG00000012331	Smarcad1	93	64.682	ENSMGAG00000005577	SMARCAD1	100	64.682	Meleagris_gallopavo
ENSDORG00000012331	Smarcad1	100	90.661	ENSMAUG00000008417	Smarcad1	100	90.661	Mesocricetus_auratus
ENSDORG00000012331	Smarcad1	100	92.636	ENSMICG00000009746	SMARCAD1	100	92.636	Microcebus_murinus
ENSDORG00000012331	Smarcad1	100	89.786	ENSMOCG00000017142	Smarcad1	100	89.786	Microtus_ochrogaster
ENSDORG00000012331	Smarcad1	76	58.481	ENSMMOG00000000275	smarcad1a	97	58.481	Mola_mola
ENSDORG00000012331	Smarcad1	100	79.787	ENSMODG00000019268	SMARCAD1	100	79.787	Monodelphis_domestica
ENSDORG00000012331	Smarcad1	95	92.208	MGP_CAROLIEiJ_G0028458	-	77	92.208	Mus_caroli
ENSDORG00000012331	Smarcad1	100	89.116	ENSMUSG00000029920	Smarcad1	100	89.116	Mus_musculus
ENSDORG00000012331	Smarcad1	100	89.213	MGP_PahariEiJ_G0022198	Smarcad1	100	89.213	Mus_pahari
ENSDORG00000012331	Smarcad1	100	89.116	MGP_SPRETEiJ_G0029462	Smarcad1	100	89.116	Mus_spretus
ENSDORG00000012331	Smarcad1	100	92.435	ENSMPUG00000002111	SMARCAD1	100	92.435	Mustela_putorius_furo
ENSDORG00000012331	Smarcad1	100	88.652	ENSMLUG00000000425	SMARCAD1	100	88.943	Myotis_lucifugus
ENSDORG00000012331	Smarcad1	100	91.813	ENSNGAG00000000810	Smarcad1	100	92.121	Nannospalax_galili
ENSDORG00000012331	Smarcad1	66	62.887	ENSNBRG00000012749	smarcad1a	82	62.049	Neolamprologus_brichardi
ENSDORG00000012331	Smarcad1	100	93.197	ENSNLEG00000014225	SMARCAD1	100	97.819	Nomascus_leucogenys
ENSDORG00000012331	Smarcad1	100	91.254	ENSODEG00000004334	SMARCAD1	100	91.254	Octodon_degus
ENSDORG00000012331	Smarcad1	63	65.741	ENSONIG00000015059	smarcad1a	100	52.867	Oreochromis_niloticus
ENSDORG00000012331	Smarcad1	80	83.333	ENSOANG00000013764	SMARCAD1	100	83.454	Ornithorhynchus_anatinus
ENSDORG00000012331	Smarcad1	100	92.996	ENSOCUG00000017283	SMARCAD1	100	92.996	Oryctolagus_cuniculus
ENSDORG00000012331	Smarcad1	63	65.991	ENSORLG00000004869	smarcad1a	69	60.519	Oryzias_latipes
ENSDORG00000012331	Smarcad1	63	65.991	ENSORLG00020020569	smarcad1a	69	60.519	Oryzias_latipes_hni
ENSDORG00000012331	Smarcad1	63	65.835	ENSORLG00015009045	smarcad1a	100	47.227	Oryzias_latipes_hsok
ENSDORG00000012331	Smarcad1	65	64.511	ENSOMEG00000023032	smarcad1a	64	63.811	Oryzias_melastigma
ENSDORG00000012331	Smarcad1	100	91.667	ENSOGAG00000011444	SMARCAD1	100	91.667	Otolemur_garnettii
ENSDORG00000012331	Smarcad1	100	91.950	ENSOARG00000017851	SMARCAD1	100	91.950	Ovis_aries
ENSDORG00000012331	Smarcad1	100	93.100	ENSPPAG00000035715	SMARCAD1	100	93.100	Pan_paniscus
ENSDORG00000012331	Smarcad1	100	92.330	ENSPPRG00000024756	SMARCAD1	100	97.483	Panthera_pardus
ENSDORG00000012331	Smarcad1	100	92.151	ENSPTIG00000017868	SMARCAD1	100	92.151	Panthera_tigris_altaica
ENSDORG00000012331	Smarcad1	100	93.197	ENSPTRG00000023126	SMARCAD1	100	97.819	Pan_troglodytes
ENSDORG00000012331	Smarcad1	100	91.667	ENSPANG00000019757	SMARCAD1	100	91.667	Papio_anubis
ENSDORG00000012331	Smarcad1	100	71.662	ENSPSIG00000010255	SMARCAD1	100	72.142	Pelodiscus_sinensis
ENSDORG00000012331	Smarcad1	63	64.230	ENSPMGG00000010735	smarcad1a	91	64.230	Periophthalmus_magnuspinnatus
ENSDORG00000012331	Smarcad1	100	75.922	ENSPEMG00000001854	Smarcad1	100	76.511	Peromyscus_maniculatus_bairdii
ENSDORG00000012331	Smarcad1	99	47.574	ENSPMAG00000003516	smarcad1a	99	47.574	Petromyzon_marinus
ENSDORG00000012331	Smarcad1	77	86.094	ENSPCIG00000008137	SMARCAD1	98	87.637	Phascolarctos_cinereus
ENSDORG00000012331	Smarcad1	95	66.099	ENSPFOG00000019116	smarcad1a	89	61.818	Poecilia_formosa
ENSDORG00000012331	Smarcad1	95	65.944	ENSPLAG00000000108	smarcad1a	89	61.678	Poecilia_latipinna
ENSDORG00000012331	Smarcad1	95	66.099	ENSPMEG00000009155	smarcad1a	89	61.818	Poecilia_mexicana
ENSDORG00000012331	Smarcad1	63	66.563	ENSPREG00000018185	smarcad1a	67	62.238	Poecilia_reticulata
ENSDORG00000012331	Smarcad1	100	92.718	ENSPPYG00000014935	SMARCAD1	100	92.718	Pongo_abelii
ENSDORG00000012331	Smarcad1	72	95.574	ENSPCOG00000020478	SMARCAD1	89	95.574	Propithecus_coquereli
ENSDORG00000012331	Smarcad1	100	91.085	ENSPVAG00000001760	SMARCAD1	100	91.085	Pteropus_vampyrus
ENSDORG00000012331	Smarcad1	67	61.884	ENSPNYG00000010087	smarcad1a	83	61.795	Pundamilia_nyererei
ENSDORG00000012331	Smarcad1	100	50.949	ENSPNAG00000001663	smarcad1a	100	50.140	Pygocentrus_nattereri
ENSDORG00000012331	Smarcad1	79	58.767	ENSPNAG00000010099	smarcad1b	88	58.816	Pygocentrus_nattereri
ENSDORG00000012331	Smarcad1	100	89.699	ENSRNOG00000006391	Smarcad1	100	89.699	Rattus_norvegicus
ENSDORG00000012331	Smarcad1	100	93.100	ENSRBIG00000041989	SMARCAD1	100	93.100	Rhinopithecus_bieti
ENSDORG00000012331	Smarcad1	100	93.100	ENSRROG00000035309	SMARCAD1	100	93.100	Rhinopithecus_roxellana
ENSDORG00000012331	Smarcad1	100	92.517	ENSSBOG00000032114	SMARCAD1	100	97.483	Saimiri_boliviensis_boliviensis
ENSDORG00000012331	Smarcad1	100	80.348	ENSSHAG00000001279	SMARCAD1	100	80.542	Sarcophilus_harrisii
ENSDORG00000012331	Smarcad1	75	57.902	ENSSFOG00015020909	smarcad1a	100	57.902	Scleropages_formosus
ENSDORG00000012331	Smarcad1	85	55.969	ENSSFOG00015016814	smarcad1b	90	55.340	Scleropages_formosus
ENSDORG00000012331	Smarcad1	68	63.688	ENSSMAG00000001326	smarcad1a	66	62.953	Scophthalmus_maximus
ENSDORG00000012331	Smarcad1	68	62.500	ENSSDUG00000022338	smarcad1a	89	58.831	Seriola_dumerili
ENSDORG00000012331	Smarcad1	66	62.808	ENSSLDG00000024986	smarcad1a	70	58.831	Seriola_lalandi_dorsalis
ENSDORG00000012331	Smarcad1	58	84.590	ENSSPUG00000004633	SMARCAD1	100	84.590	Sphenodon_punctatus
ENSDORG00000012331	Smarcad1	68	62.931	ENSSPAG00000001970	smarcad1a	66	61.538	Stegastes_partitus
ENSDORG00000012331	Smarcad1	100	92.144	ENSSSCG00000009193	SMARCAD1	100	94.768	Sus_scrofa
ENSDORG00000012331	Smarcad1	76	77.423	ENSTGUG00000003127	SMARCAD1	100	77.679	Taeniopygia_guttata
ENSDORG00000012331	Smarcad1	85	56.328	ENSTNIG00000017585	smarcad1a	99	56.448	Tetraodon_nigroviridis
ENSDORG00000012331	Smarcad1	91	97.421	ENSTBEG00000002789	SMARCAD1	91	97.421	Tupaia_belangeri
ENSDORG00000012331	Smarcad1	97	91.717	ENSTTRG00000000226	SMARCAD1	99	91.717	Tursiops_truncatus
ENSDORG00000012331	Smarcad1	100	92.144	ENSUAMG00000022262	SMARCAD1	99	95.658	Ursus_americanus
ENSDORG00000012331	Smarcad1	100	92.427	ENSUMAG00000004549	SMARCAD1	100	92.427	Ursus_maritimus
ENSDORG00000012331	Smarcad1	100	91.950	ENSVVUG00000007271	SMARCAD1	100	94.768	Vulpes_vulpes
ENSDORG00000012331	Smarcad1	84	65.124	ENSXETG00000019214	smarcad1	100	65.011	Xenopus_tropicalis
ENSDORG00000012331	Smarcad1	82	56.340	ENSXCOG00000005232	smarcad1a	86	58.047	Xiphophorus_couchianus