EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSDORG00000012379 (Gene tree)
Gene ID: 105984965
Gene Symbol: Slirp
Alias: -
Full Name: SRA stem-loop interacting RNA binding protein
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Minus strand
Length: 4264 bases
Position: chrKN672348.1:20546256-20550519
Accession: 105984965
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000011639	RRM_1	PF00076.22	1e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000012379	-	421	XM_013015360	ENSDORP00000011639	111 (aa)	XP_012870814	A0A1S3F3X5

Gene Model

Click here to download ENSDORG00000012379's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000012379's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000012379	Slirp	86	68.421	ENSG00000119705	SLIRP	97	75.676	Homo_sapiens
ENSDORG00000012379	Slirp	80	50.562	ENSAPOG00000001298	slirp	88	50.562	Acanthochromis_polyacanthus
ENSDORG00000012379	Slirp	82	73.626	ENSAMEG00000003975	SLIRP	100	73.626	Ailuropoda_melanoleuca
ENSDORG00000012379	Slirp	68	55.263	ENSACIG00000023083	slirp	75	55.263	Amphilophus_citrinellus
ENSDORG00000012379	Slirp	81	52.222	ENSAOCG00000006342	slirp	90	52.222	Amphiprion_ocellaris
ENSDORG00000012379	Slirp	81	52.222	ENSAPEG00000015917	slirp	90	52.222	Amphiprion_percula
ENSDORG00000012379	Slirp	81	52.222	ENSAPEG00000015719	-	91	52.222	Amphiprion_percula
ENSDORG00000012379	Slirp	68	52.632	ENSATEG00000013525	slirp	76	52.632	Anabas_testudineus
ENSDORG00000012379	Slirp	79	51.136	ENSAMXG00000018693	slirp	88	51.136	Astyanax_mexicanus
ENSDORG00000012379	Slirp	100	71.171	ENSCJAG00000016946	SLIRP	100	71.171	Callithrix_jacchus
ENSDORG00000012379	Slirp	100	71.171	ENSCAFG00020015876	-	100	71.171	Canis_lupus_dingo
ENSDORG00000012379	Slirp	100	73.874	ENSCCAG00000030130	SLIRP	100	73.874	Cebus_capucinus
ENSDORG00000012379	Slirp	100	65.766	ENSCATG00000036327	SLIRP	95	71.591	Cercocebus_atys
ENSDORG00000012379	Slirp	90	69.000	ENSCSAG00000011736	SLIRP	100	68.468	Chlorocebus_sabaeus
ENSDORG00000012379	Slirp	61	54.412	ENSCPBG00000026327	SLIRP	69	54.412	Chrysemys_picta_bellii
ENSDORG00000012379	Slirp	67	75.676	ENSCANG00000032892	SLIRP	90	72.727	Colobus_angolensis_palliatus
ENSDORG00000012379	Slirp	100	64.865	ENSCGRG00001024068	Slirp	100	64.865	Cricetulus_griseus_chok1gshd
ENSDORG00000012379	Slirp	100	64.865	ENSCGRG00000017440	Slirp	100	64.865	Cricetulus_griseus_crigri
ENSDORG00000012379	Slirp	64	57.746	ENSCSEG00000015766	slirp	72	57.746	Cynoglossus_semilaevis
ENSDORG00000012379	Slirp	73	46.914	ENSCVAG00000012504	slirp	80	46.914	Cyprinodon_variegatus
ENSDORG00000012379	Slirp	68	52.632	ENSDARG00000097753	slirp	73	53.333	Danio_rerio
ENSDORG00000012379	Slirp	82	74.725	ENSDNOG00000007721	SLIRP	100	69.369	Dasypus_novemcinctus
ENSDORG00000012379	Slirp	90	74.000	ENSETEG00000010345	SLIRP	100	72.973	Echinops_telfairi
ENSDORG00000012379	Slirp	98	82.569	ENSEASG00005020193	SLIRP	98	82.569	Equus_asinus_asinus
ENSDORG00000012379	Slirp	95	60.952	ENSEEUG00000007257	SLIRP	97	60.952	Erinaceus_europaeus
ENSDORG00000012379	Slirp	77	48.837	ENSELUG00000016800	slirp	84	48.837	Esox_lucius
ENSDORG00000012379	Slirp	80	83.146	ENSFCAG00000036326	SLIRP	91	83.146	Felis_catus
ENSDORG00000012379	Slirp	64	49.296	ENSFALG00000012583	SLIRP	96	45.192	Ficedula_albicollis
ENSDORG00000012379	Slirp	95	73.585	ENSFDAG00000008347	SLIRP	94	73.585	Fukomys_damarensis
ENSDORG00000012379	Slirp	70	47.436	ENSFHEG00000004709	slirp	83	47.436	Fundulus_heteroclitus
ENSDORG00000012379	Slirp	68	51.316	ENSGMOG00000016948	slirp	73	51.316	Gadus_morhua
ENSDORG00000012379	Slirp	67	50.000	ENSGALG00000031238	SLIRP	74	50.685	Gallus_gallus
ENSDORG00000012379	Slirp	68	53.947	ENSGAFG00000010998	slirp	76	53.947	Gambusia_affinis
ENSDORG00000012379	Slirp	65	48.611	ENSGACG00000020137	slirp	84	48.611	Gasterosteus_aculeatus
ENSDORG00000012379	Slirp	95	48.113	ENSGAGG00000009953	SLIRP	73	48.113	Gopherus_agassizii
ENSDORG00000012379	Slirp	86	67.368	ENSGGOG00000011059	-	95	73.864	Gorilla_gorilla
ENSDORG00000012379	Slirp	100	69.369	ENSHGLG00000018491	SLIRP	100	69.369	Heterocephalus_glaber_female
ENSDORG00000012379	Slirp	100	69.369	ENSHGLG00100014153	SLIRP	100	69.369	Heterocephalus_glaber_male
ENSDORG00000012379	Slirp	75	52.941	ENSHCOG00000006795	slirp	86	52.941	Hippocampus_comes
ENSDORG00000012379	Slirp	68	53.333	ENSIPUG00000010214	SLIRP	75	53.333	Ictalurus_punctatus
ENSDORG00000012379	Slirp	90	81.000	ENSSTOG00000034316	SLIRP	100	79.279	Ictidomys_tridecemlineatus
ENSDORG00000012379	Slirp	77	43.478	ENSKMAG00000002038	slirp	88	43.478	Kryptolebias_marmoratus
ENSDORG00000012379	Slirp	78	51.724	ENSLBEG00000007564	slirp	87	51.724	Labrus_bergylta
ENSDORG00000012379	Slirp	78	49.425	ENSLACG00000013434	SLIRP	83	49.425	Latimeria_chalumnae
ENSDORG00000012379	Slirp	90	68.000	ENSMFAG00000042960	SLIRP	95	72.727	Macaca_fascicularis
ENSDORG00000012379	Slirp	90	68.000	ENSMMUG00000029256	SLIRP	95	72.727	Macaca_mulatta
ENSDORG00000012379	Slirp	90	68.000	ENSMNEG00000028921	SLIRP	95	72.727	Macaca_nemestrina
ENSDORG00000012379	Slirp	79	71.591	ENSMLEG00000043644	SLIRP	90	71.591	Mandrillus_leucophaeus
ENSDORG00000012379	Slirp	80	49.438	ENSMZEG00005004617	slirp	89	49.438	Maylandia_zebra
ENSDORG00000012379	Slirp	100	70.270	ENSMAUG00000003857	Slirp	100	70.270	Mesocricetus_auratus
ENSDORG00000012379	Slirp	100	66.667	ENSMICG00000012080	SLIRP	100	66.667	Microcebus_murinus
ENSDORG00000012379	Slirp	100	72.072	ENSMOCG00000016019	Slirp	99	72.072	Microtus_ochrogaster
ENSDORG00000012379	Slirp	79	47.727	ENSMMOG00000018268	slirp	88	47.727	Mola_mola
ENSDORG00000012379	Slirp	63	68.571	ENSMODG00000005207	-	99	68.571	Monodelphis_domestica
ENSDORG00000012379	Slirp	79	48.864	ENSMALG00000012581	slirp	88	48.864	Monopterus_albus
ENSDORG00000012379	Slirp	100	72.072	MGP_CAROLIEiJ_G0017995	Slirp	100	74.074	Mus_caroli
ENSDORG00000012379	Slirp	100	72.973	ENSMUSG00000021040	Slirp	99	72.973	Mus_musculus
ENSDORG00000012379	Slirp	100	72.973	MGP_SPRETEiJ_G0018840	Slirp	99	72.973	Mus_spretus
ENSDORG00000012379	Slirp	90	77.000	ENSMLUG00000029544	-	100	74.775	Myotis_lucifugus
ENSDORG00000012379	Slirp	86	75.789	ENSMLUG00000024998	-	100	72.973	Myotis_lucifugus
ENSDORG00000012379	Slirp	97	75.926	ENSNGAG00000016363	Slirp	100	75.926	Nannospalax_galili
ENSDORG00000012379	Slirp	93	62.136	ENSNLEG00000027238	-	93	66.667	Nomascus_leucogenys
ENSDORG00000012379	Slirp	100	63.964	ENSNLEG00000032459	-	100	63.964	Nomascus_leucogenys
ENSDORG00000012379	Slirp	100	77.477	ENSODEG00000012580	SLIRP	99	78.022	Octodon_degus
ENSDORG00000012379	Slirp	78	52.874	ENSONIG00000011692	slirp	86	52.874	Oreochromis_niloticus
ENSDORG00000012379	Slirp	96	56.364	ENSOANG00000022366	SLIRP	99	56.364	Ornithorhynchus_anatinus
ENSDORG00000012379	Slirp	80	48.315	ENSORLG00000010761	slirp	68	48.315	Oryzias_latipes
ENSDORG00000012379	Slirp	80	49.438	ENSORLG00020022188	slirp	88	49.438	Oryzias_latipes_hni
ENSDORG00000012379	Slirp	80	48.315	ENSORLG00015020171	slirp	87	48.315	Oryzias_latipes_hsok
ENSDORG00000012379	Slirp	68	54.667	ENSOMEG00000019321	slirp	75	54.667	Oryzias_melastigma
ENSDORG00000012379	Slirp	86	66.316	ENSPPAG00000040710	-	95	73.864	Pan_paniscus
ENSDORG00000012379	Slirp	80	83.146	ENSPPRG00000014350	SLIRP	91	83.146	Panthera_pardus
ENSDORG00000012379	Slirp	80	83.146	ENSPTIG00000014196	SLIRP	91	83.146	Panthera_tigris_altaica
ENSDORG00000012379	Slirp	86	67.368	ENSPTRG00000030691	SLIRP	95	73.864	Pan_troglodytes
ENSDORG00000012379	Slirp	100	67.568	ENSPANG00000026323	SLIRP	95	72.727	Papio_anubis
ENSDORG00000012379	Slirp	59	50.000	ENSPKIG00000008831	slirp	65	50.000	Paramormyrops_kingsleyae
ENSDORG00000012379	Slirp	62	55.072	ENSPMGG00000010541	slirp	79	55.072	Periophthalmus_magnuspinnatus
ENSDORG00000012379	Slirp	90	70.297	ENSPEMG00000013234	Slirp	98	67.857	Peromyscus_maniculatus_bairdii
ENSDORG00000012379	Slirp	60	50.746	ENSPMAG00000009355	slirp	74	50.746	Petromyzon_marinus
ENSDORG00000012379	Slirp	78	60.920	ENSPCIG00000026842	-	84	60.920	Phascolarctos_cinereus
ENSDORG00000012379	Slirp	68	53.947	ENSPFOG00000006758	slirp	76	53.947	Poecilia_formosa
ENSDORG00000012379	Slirp	68	53.947	ENSPLAG00000011140	slirp	76	53.947	Poecilia_latipinna
ENSDORG00000012379	Slirp	68	53.947	ENSPMEG00000019535	slirp	76	53.947	Poecilia_mexicana
ENSDORG00000012379	Slirp	68	53.947	ENSPREG00000011673	slirp	76	53.947	Poecilia_reticulata
ENSDORG00000012379	Slirp	88	67.347	ENSPPYG00000006030	SLIRP	97	67.890	Pongo_abelii
ENSDORG00000012379	Slirp	100	70.270	ENSPCOG00000015159	SLIRP	100	70.270	Propithecus_coquereli
ENSDORG00000012379	Slirp	80	56.180	ENSPNAG00000008633	slirp	89	56.180	Pygocentrus_nattereri
ENSDORG00000012379	Slirp	69	72.727	ENSRBIG00000032998	-	81	71.591	Rhinopithecus_bieti
ENSDORG00000012379	Slirp	90	69.000	ENSRBIG00000032222	-	100	68.468	Rhinopithecus_bieti
ENSDORG00000012379	Slirp	68	73.333	ENSRBIG00000031396	-	86	72.093	Rhinopithecus_bieti
ENSDORG00000012379	Slirp	88	65.306	ENSRBIG00000035817	-	100	65.138	Rhinopithecus_bieti
ENSDORG00000012379	Slirp	80	66.292	ENSRROG00000041312	-	99	66.000	Rhinopithecus_roxellana
ENSDORG00000012379	Slirp	69	72.727	ENSRROG00000017133	-	92	71.591	Rhinopithecus_roxellana
ENSDORG00000012379	Slirp	90	68.000	ENSRROG00000036656	-	100	67.568	Rhinopithecus_roxellana
ENSDORG00000012379	Slirp	68	74.667	ENSRROG00000035604	-	86	73.256	Rhinopithecus_roxellana
ENSDORG00000012379	Slirp	79	71.591	ENSSBOG00000020014	SLIRP	95	71.591	Saimiri_boliviensis_boliviensis
ENSDORG00000012379	Slirp	63	65.714	ENSSFOG00015011165	slirp	71	65.714	Scleropages_formosus
ENSDORG00000012379	Slirp	78	40.230	ENSSMAG00000012930	slirp	85	40.230	Scophthalmus_maximus
ENSDORG00000012379	Slirp	68	56.579	ENSSDUG00000021883	slirp	50	56.579	Seriola_dumerili
ENSDORG00000012379	Slirp	68	56.579	ENSSLDG00000023136	slirp	69	56.579	Seriola_lalandi_dorsalis
ENSDORG00000012379	Slirp	68	49.333	ENSSPUG00000009346	SLIRP	77	49.333	Sphenodon_punctatus
ENSDORG00000012379	Slirp	67	51.351	ENSSPAG00000013477	slirp	74	51.351	Stegastes_partitus
ENSDORG00000012379	Slirp	100	81.081	ENSSSCG00000028167	SLIRP	100	81.081	Sus_scrofa
ENSDORG00000012379	Slirp	77	47.674	ENSTGUG00000012337	SLIRP	98	45.283	Taeniopygia_guttata
ENSDORG00000012379	Slirp	68	50.649	ENSTRUG00000020127	slirp	76	50.649	Takifugu_rubripes
ENSDORG00000012379	Slirp	100	79.279	ENSUAMG00000022445	SLIRP	100	79.279	Ursus_americanus
ENSDORG00000012379	Slirp	100	80.180	ENSUMAG00000007166	SLIRP	100	80.180	Ursus_maritimus
ENSDORG00000012379	Slirp	100	75.676	ENSVPAG00000001781	SLIRP	100	75.676	Vicugna_pacos
ENSDORG00000012379	Slirp	85	77.660	ENSVVUG00000004436	SLIRP	98	74.312	Vulpes_vulpes
ENSDORG00000012379	Slirp	64	50.704	ENSXETG00000030343	SLIRP	80	50.704	Xenopus_tropicalis
ENSDORG00000012379	Slirp	81	45.556	ENSXCOG00000009422	slirp	89	45.556	Xiphophorus_couchianus
ENSDORG00000012379	Slirp	68	52.632	ENSXMAG00000015655	slirp	76	52.632	Xiphophorus_maculatus