EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSDORG00000012484 (Gene tree)
Gene ID: 105980538
Gene Symbol: Tgs1
Alias: D4Ertd800e|Ncoa6ip|Pimt
Full Name: trimethylguanosine synthase 1
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Plus strand
Length: 32853 bases
Position: chrKN672355.1:20984296-21017148
Accession: 105980538
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000011741	Methyltransf_15	PF09445.10	5.6e-41	1	1
ENSDORP00000011741	UPF0020	PF01170.18	1.8e-05	1	1
ENSDORP00000011741	Met_10	PF02475.16	5.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000012485	-	2505	XM_013009425	ENSDORP00000011741	834 (aa)	XP_012864879	UPI000BAD1887

Gene Model

Click here to download ENSDORG00000012484's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000012484's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000012484	Tgs1	100	75.846	ENSG00000137574	TGS1	100	75.613	Homo_sapiens
ENSDORG00000012484	Tgs1	100	76.140	ENSAMEG00000001781	TGS1	100	76.140	Ailuropoda_melanoleuca
ENSDORG00000012484	Tgs1	77	49.642	ENSAPLG00000006073	-	100	49.928	Anas_platyrhynchos
ENSDORG00000012484	Tgs1	99	48.884	ENSACAG00000017988	TGS1	92	49.327	Anolis_carolinensis
ENSDORG00000012484	Tgs1	99	68.831	ENSANAG00000035525	TGS1	100	68.713	Aotus_nancymaae
ENSDORG00000012484	Tgs1	98	35.558	ENSACLG00000000261	lyn	98	36.879	Astatotilapia_calliptera
ENSDORG00000012484	Tgs1	98	38.489	ENSAMXG00000014086	lyn	98	39.059	Astyanax_mexicanus
ENSDORG00000012484	Tgs1	100	67.681	ENSBTAG00000005898	TGS1	100	68.970	Bos_taurus
ENSDORG00000012484	Tgs1	99	74.531	ENSCJAG00000016657	TGS1	98	74.296	Callithrix_jacchus
ENSDORG00000012484	Tgs1	100	75.205	ENSCAFG00000007011	TGS1	100	75.205	Canis_familiaris
ENSDORG00000012484	Tgs1	100	74.795	ENSCAFG00020015485	TGS1	100	74.795	Canis_lupus_dingo
ENSDORG00000012484	Tgs1	100	67.719	ENSCHIG00000013976	TGS1	100	68.538	Capra_hircus
ENSDORG00000012484	Tgs1	100	75.059	ENSTSYG00000000171	TGS1	100	75.059	Carlito_syrichta
ENSDORG00000012484	Tgs1	96	69.012	ENSCAPG00000013732	TGS1	99	68.642	Cavia_aperea
ENSDORG00000012484	Tgs1	100	71.630	ENSCPOG00000009713	TGS1	99	71.395	Cavia_porcellus
ENSDORG00000012484	Tgs1	99	75.058	ENSCCAG00000030476	TGS1	99	75.058	Cebus_capucinus
ENSDORG00000012484	Tgs1	100	75.496	ENSCATG00000035375	TGS1	100	75.846	Cercocebus_atys
ENSDORG00000012484	Tgs1	100	71.765	ENSCLAG00000009468	TGS1	99	71.176	Chinchilla_lanigera
ENSDORG00000012484	Tgs1	93	75.000	ENSCSAG00000014611	TGS1	99	75.000	Chlorocebus_sabaeus
ENSDORG00000012484	Tgs1	100	70.794	ENSCHOG00000001462	TGS1	100	70.327	Choloepus_hoffmanni
ENSDORG00000012484	Tgs1	99	55.314	ENSCPBG00000004958	TGS1	99	55.771	Chrysemys_picta_bellii
ENSDORG00000012484	Tgs1	100	76.313	ENSCANG00000041389	TGS1	100	76.313	Colobus_angolensis_palliatus
ENSDORG00000012484	Tgs1	100	75.059	ENSCGRG00001019470	Tgs1	99	75.059	Cricetulus_griseus_chok1gshd
ENSDORG00000012484	Tgs1	100	73.684	ENSCGRG00000008981	Tgs1	99	73.684	Cricetulus_griseus_crigri
ENSDORG00000012484	Tgs1	98	38.184	ENSDARG00000107511	lyn	99	72.222	Danio_rerio
ENSDORG00000012484	Tgs1	99	73.364	ENSDNOG00000008353	TGS1	99	73.364	Dasypus_novemcinctus
ENSDORG00000012484	Tgs1	81	71.053	ENSETEG00000005126	TGS1	85	71.053	Echinops_telfairi
ENSDORG00000012484	Tgs1	93	74.088	ENSEASG00005016371	TGS1	95	74.214	Equus_asinus_asinus
ENSDORG00000012484	Tgs1	100	74.796	ENSECAG00000019399	TGS1	99	74.912	Equus_caballus
ENSDORG00000012484	Tgs1	71	93.443	ENSEEUG00000001735	TGS1	71	93.443	Erinaceus_europaeus
ENSDORG00000012484	Tgs1	99	41.259	ENSELUG00000012537	lyn	99	41.231	Esox_lucius
ENSDORG00000012484	Tgs1	100	75.410	ENSFCAG00000011478	TGS1	100	75.761	Felis_catus
ENSDORG00000012484	Tgs1	89	48.886	ENSFALG00000010249	TGS1	99	50.000	Ficedula_albicollis
ENSDORG00000012484	Tgs1	100	74.883	ENSFDAG00000011405	TGS1	100	74.413	Fukomys_damarensis
ENSDORG00000012484	Tgs1	98	48.658	ENSGALG00000015340	TGS1	99	49.217	Gallus_gallus
ENSDORG00000012484	Tgs1	99	54.515	ENSGAGG00000019590	TGS1	99	54.831	Gopherus_agassizii
ENSDORG00000012484	Tgs1	100	75.963	ENSGGOG00000008624	TGS1	100	75.963	Gorilla_gorilla
ENSDORG00000012484	Tgs1	90	93.333	ENSHGLG00000000284	TGS1	90	93.333	Heterocephalus_glaber_female
ENSDORG00000012484	Tgs1	98	39.120	ENSHCOG00000014161	lyn	98	39.120	Hippocampus_comes
ENSDORG00000012484	Tgs1	78	41.728	ENSIPUG00000002294	tgs1	98	39.397	Ictalurus_punctatus
ENSDORG00000012484	Tgs1	99	75.967	ENSSTOG00000009597	TGS1	100	76.140	Ictidomys_tridecemlineatus
ENSDORG00000012484	Tgs1	99	73.365	ENSJJAG00000016239	Tgs1	100	73.365	Jaculus_jaculus
ENSDORG00000012484	Tgs1	98	35.714	ENSKMAG00000019371	-	98	35.334	Kryptolebias_marmoratus
ENSDORG00000012484	Tgs1	98	37.632	ENSLBEG00000027341	-	96	38.471	Labrus_bergylta
ENSDORG00000012484	Tgs1	99	46.682	ENSLACG00000008074	TGS1	100	47.072	Latimeria_chalumnae
ENSDORG00000012484	Tgs1	99	41.647	ENSLOCG00000005492	lyn	98	42.500	Lepisosteus_oculatus
ENSDORG00000012484	Tgs1	100	71.345	ENSLAFG00000015386	TGS1	100	71.345	Loxodonta_africana
ENSDORG00000012484	Tgs1	100	75.729	ENSMFAG00000029838	TGS1	100	75.496	Macaca_fascicularis
ENSDORG00000012484	Tgs1	100	76.285	ENSMMUG00000005478	TGS1	100	76.285	Macaca_mulatta
ENSDORG00000012484	Tgs1	100	75.613	ENSMNEG00000023719	TGS1	100	75.379	Macaca_nemestrina
ENSDORG00000012484	Tgs1	100	75.263	ENSMLEG00000034807	TGS1	100	76.079	Mandrillus_leucophaeus
ENSDORG00000012484	Tgs1	98	36.721	ENSMAMG00000009542	TGS1	98	36.879	Mastacembelus_armatus
ENSDORG00000012484	Tgs1	85	48.240	ENSMGAG00000010966	TGS1	93	49.459	Meleagris_gallopavo
ENSDORG00000012484	Tgs1	100	73.653	ENSMAUG00000009875	Tgs1	99	74.175	Mesocricetus_auratus
ENSDORG00000012484	Tgs1	100	76.196	ENSMICG00000011199	TGS1	100	76.779	Microcebus_murinus
ENSDORG00000012484	Tgs1	99	70.657	ENSMOCG00000019560	Tgs1	99	70.892	Microtus_ochrogaster
ENSDORG00000012484	Tgs1	87	63.685	ENSMODG00000009174	TGS1	98	64.085	Monodelphis_domestica
ENSDORG00000012484	Tgs1	76	39.542	ENSMALG00000021440	lyn	90	39.205	Monopterus_albus
ENSDORG00000012484	Tgs1	99	72.931	MGP_CAROLIEiJ_G0025779	-	99	72.931	Mus_caroli
ENSDORG00000012484	Tgs1	99	66.861	MGP_CAROLIEiJ_G0025780	-	98	66.861	Mus_caroli
ENSDORG00000012484	Tgs1	99	72.813	ENSMUSG00000028233	Tgs1	99	72.813	Mus_musculus
ENSDORG00000012484	Tgs1	99	66.705	MGP_PahariEiJ_G0023902	-	98	67.288	Mus_pahari
ENSDORG00000012484	Tgs1	99	72.759	MGP_PahariEiJ_G0023901	-	99	73.349	Mus_pahari
ENSDORG00000012484	Tgs1	57	87.037	MGP_SPRETEiJ_G0026726	-	94	86.301	Mus_spretus
ENSDORG00000012484	Tgs1	99	72.931	MGP_SPRETEiJ_G0026727	-	99	72.931	Mus_spretus
ENSDORG00000012484	Tgs1	93	73.678	ENSMPUG00000010475	TGS1	99	74.401	Mustela_putorius_furo
ENSDORG00000012484	Tgs1	100	71.846	ENSMLUG00000014857	TGS1	100	71.612	Myotis_lucifugus
ENSDORG00000012484	Tgs1	100	74.299	ENSNGAG00000019532	Tgs1	99	74.883	Nannospalax_galili
ENSDORG00000012484	Tgs1	100	76.546	ENSNLEG00000001101	TGS1	100	76.546	Nomascus_leucogenys
ENSDORG00000012484	Tgs1	93	62.142	ENSMEUG00000001697	TGS1	99	62.516	Notamacropus_eugenii
ENSDORG00000012484	Tgs1	91	68.497	ENSODEG00000002948	TGS1	100	68.235	Octodon_degus
ENSDORG00000012484	Tgs1	77	40.299	ENSONIG00000006339	lyn	94	39.623	Oreochromis_niloticus
ENSDORG00000012484	Tgs1	89	62.008	ENSOANG00000021853	TGS1	98	62.135	Ornithorhynchus_anatinus
ENSDORG00000012484	Tgs1	100	74.152	ENSOCUG00000017522	TGS1	100	73.684	Oryctolagus_cuniculus
ENSDORG00000012484	Tgs1	76	39.676	ENSOMEG00000020174	lyn	96	36.998	Oryzias_melastigma
ENSDORG00000012484	Tgs1	100	75.088	ENSOGAG00000012572	TGS1	100	75.322	Otolemur_garnettii
ENSDORG00000012484	Tgs1	100	67.366	ENSOARG00000014613	TGS1	100	68.298	Ovis_aries
ENSDORG00000012484	Tgs1	100	75.963	ENSPPAG00000039058	TGS1	100	75.963	Pan_paniscus
ENSDORG00000012484	Tgs1	100	74.590	ENSPPRG00000000677	TGS1	100	74.590	Panthera_pardus
ENSDORG00000012484	Tgs1	100	74.707	ENSPTIG00000005122	TGS1	100	74.707	Panthera_tigris_altaica
ENSDORG00000012484	Tgs1	100	75.963	ENSPTRG00000020262	TGS1	100	75.963	Pan_troglodytes
ENSDORG00000012484	Tgs1	100	75.263	ENSPANG00000018910	TGS1	100	76.079	Papio_anubis
ENSDORG00000012484	Tgs1	78	41.629	ENSPKIG00000005454	lyn	69	42.342	Paramormyrops_kingsleyae
ENSDORG00000012484	Tgs1	99	54.464	ENSPSIG00000014983	TGS1	100	54.688	Pelodiscus_sinensis
ENSDORG00000012484	Tgs1	58	68.936	ENSPMGG00000012711	lyn	50	73.272	Periophthalmus_magnuspinnatus
ENSDORG00000012484	Tgs1	100	72.909	ENSPEMG00000007957	Tgs1	99	72.909	Peromyscus_maniculatus_bairdii
ENSDORG00000012484	Tgs1	99	64.931	ENSPCIG00000016232	TGS1	99	64.931	Phascolarctos_cinereus
ENSDORG00000012484	Tgs1	76	40.030	ENSPFOG00000001545	-	99	39.939	Poecilia_formosa
ENSDORG00000012484	Tgs1	92	34.562	ENSPREG00000012261	-	99	34.470	Poecilia_reticulata
ENSDORG00000012484	Tgs1	100	75.846	ENSPPYG00000018597	TGS1	100	75.379	Pongo_abelii
ENSDORG00000012484	Tgs1	100	68.347	ENSPCAG00000000143	TGS1	100	67.995	Procavia_capensis
ENSDORG00000012484	Tgs1	100	77.066	ENSPCOG00000013537	TGS1	100	77.648	Propithecus_coquereli
ENSDORG00000012484	Tgs1	100	69.168	ENSPVAG00000016399	TGS1	100	69.050	Pteropus_vampyrus
ENSDORG00000012484	Tgs1	98	37.911	ENSPNAG00000022249	lyn	98	39.110	Pygocentrus_nattereri
ENSDORG00000012484	Tgs1	99	72.052	ENSRNOG00000008156	Tgs1	99	72.170	Rattus_norvegicus
ENSDORG00000012484	Tgs1	100	75.441	ENSRBIG00000041893	TGS1	100	75.441	Rhinopithecus_bieti
ENSDORG00000012484	Tgs1	100	76.429	ENSRROG00000035127	TGS1	100	76.429	Rhinopithecus_roxellana
ENSDORG00000012484	Tgs1	95	72.005	ENSSBOG00000024469	TGS1	99	72.127	Saimiri_boliviensis_boliviensis
ENSDORG00000012484	Tgs1	99	62.860	ENSSHAG00000012878	TGS1	99	63.206	Sarcophilus_harrisii
ENSDORG00000012484	Tgs1	96	38.642	ENSSFOG00015001308	tgs1	96	39.294	Scleropages_formosus
ENSDORG00000012484	Tgs1	96	37.182	ENSSMAG00000019469	lyn	96	38.276	Scophthalmus_maximus
ENSDORG00000012484	Tgs1	90	66.320	ENSSSCG00000006251	TGS1	98	66.883	Sus_scrofa
ENSDORG00000012484	Tgs1	96	51.074	ENSTGUG00000011050	TGS1	100	51.435	Taeniopygia_guttata
ENSDORG00000012484	Tgs1	54	70.561	ENSTRUG00000009532	lyn	65	70.561	Takifugu_rubripes
ENSDORG00000012484	Tgs1	89	37.372	ENSTNIG00000018133	lyn	99	38.402	Tetraodon_nigroviridis
ENSDORG00000012484	Tgs1	85	98.361	ENSTBEG00000010953	TGS1	85	98.361	Tupaia_belangeri
ENSDORG00000012484	Tgs1	94	71.486	ENSTTRG00000017239	TGS1	93	71.486	Tursiops_truncatus
ENSDORG00000012484	Tgs1	100	75.822	ENSUAMG00000027718	TGS1	100	75.822	Ursus_americanus
ENSDORG00000012484	Tgs1	93	75.379	ENSUMAG00000009761	TGS1	99	75.379	Ursus_maritimus
ENSDORG00000012484	Tgs1	84	65.417	ENSVPAG00000001166	TGS1	88	65.556	Vicugna_pacos
ENSDORG00000012484	Tgs1	93	73.737	ENSVVUG00000017821	TGS1	99	73.737	Vulpes_vulpes
ENSDORG00000012484	Tgs1	99	45.800	ENSXETG00000005648	tgs1	100	45.246	Xenopus_tropicalis