EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDORG00000012513 (Gene tree)
Gene ID: 105981171
Gene Symbol: -
Alias: -
Full Name: nucleolin
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Minus strand
Length: 11400 bases
Position: chrKN672347.1:62346071-62357470
Accession: 105981171
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000011765	RRM_1	PF00076.22	4e-58	1	4
ENSDORP00000011765	RRM_1	PF00076.22	4e-58	2	4
ENSDORP00000011765	RRM_1	PF00076.22	4e-58	3	4
ENSDORP00000011765	RRM_1	PF00076.22	4e-58	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000012513	-	2100	XM_013010237	ENSDORP00000011765	699 (aa)	XP_012865691	UPI000BAD027D

Gene Model

Click here to download ENSDORG00000012513's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000012513's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDORG00000012513	-	91	85.669	ENSDORG00000023596	-	93	86.142
ENSDORG00000012513	-	52	34.646	ENSDORG00000010683	Tial1	61	34.677

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000012513	-	91	78.034	ENSG00000115053	NCL	99	74.545	Homo_sapiens
ENSDORG00000012513	-	54	83.377	ENSAMEG00000016289	NCL	53	83.377	Ailuropoda_melanoleuca
ENSDORG00000012513	-	99	62.680	ENSANAG00000024378	-	77	76.923	Aotus_nancymaae
ENSDORG00000012513	-	91	78.308	ENSANAG00000035814	-	92	78.308	Aotus_nancymaae
ENSDORG00000012513	-	77	83.099	ENSBTAG00000050728	-	89	82.857	Bos_taurus
ENSDORG00000012513	-	55	82.979	ENSBTAG00000026909	-	83	83.453	Bos_taurus
ENSDORG00000012513	-	76	39.648	ENSBTAG00000051320	-	86	77.934	Bos_taurus
ENSDORG00000012513	-	94	74.265	ENSBTAG00000016174	NCL	54	84.433	Bos_taurus
ENSDORG00000012513	-	54	84.169	ENSCJAG00000013538	NCL	92	75.460	Callithrix_jacchus
ENSDORG00000012513	-	91	77.710	ENSCAFG00000011037	NCL	53	84.169	Canis_familiaris
ENSDORG00000012513	-	84	76.040	ENSCAFG00020023145	NCL	56	84.169	Canis_lupus_dingo
ENSDORG00000012513	-	84	74.590	ENSCHIG00000010894	-	57	84.433	Capra_hircus
ENSDORG00000012513	-	91	58.411	ENSCHIG00000012143	-	74	70.185	Capra_hircus
ENSDORG00000012513	-	91	69.939	ENSCHIG00000026149	-	53	78.364	Capra_hircus
ENSDORG00000012513	-	82	85.408	ENSCHIG00000021052	-	86	85.043	Capra_hircus
ENSDORG00000012513	-	89	68.354	ENSTSYG00000036886	-	75	78.049	Carlito_syrichta
ENSDORG00000012513	-	94	77.058	ENSTSYG00000029779	-	98	76.936	Carlito_syrichta
ENSDORG00000012513	-	91	78.626	ENSTSYG00000004355	-	92	78.779	Carlito_syrichta
ENSDORG00000012513	-	55	77.979	ENSCAPG00000009405	NCL	53	77.979	Cavia_aperea
ENSDORG00000012513	-	54	83.113	ENSCPOG00000001034	NCL	53	83.113	Cavia_porcellus
ENSDORG00000012513	-	54	84.169	ENSCCAG00000021040	-	54	84.169	Cebus_capucinus
ENSDORG00000012513	-	77	77.387	ENSCCAG00000000551	-	76	77.612	Cebus_capucinus
ENSDORG00000012513	-	91	79.109	ENSCATG00000037033	NCL	92	78.495	Cercocebus_atys
ENSDORG00000012513	-	91	75.342	ENSCLAG00000013080	NCL	92	74.581	Chinchilla_lanigera
ENSDORG00000012513	-	55	84.238	ENSCSAG00000006660	NCL	83	84.197	Chlorocebus_sabaeus
ENSDORG00000012513	-	62	67.048	ENSCHOG00000012860	NCL	78	70.370	Choloepus_hoffmanni
ENSDORG00000012513	-	50	100.000	ENSCANG00000036756	NCL	81	100.000	Colobus_angolensis_palliatus
ENSDORG00000012513	-	92	66.616	ENSCGRG00001022350	-	56	76.517	Cricetulus_griseus_chok1gshd
ENSDORG00000012513	-	91	80.153	ENSCGRG00001024315	-	53	87.831	Cricetulus_griseus_chok1gshd
ENSDORG00000012513	-	85	79.412	ENSCGRG00000017894	-	54	87.831	Cricetulus_griseus_crigri
ENSDORG00000012513	-	92	66.872	ENSCGRG00000000507	-	56	76.517	Cricetulus_griseus_crigri
ENSDORG00000012513	-	92	77.644	ENSDNOG00000010783	-	54	83.247	Dasypus_novemcinctus
ENSDORG00000012513	-	91	68.817	ENSDNOG00000046347	-	54	74.541	Dasypus_novemcinctus
ENSDORG00000012513	-	53	57.181	ENSETEG00000008553	-	80	57.256	Echinops_telfairi
ENSDORG00000012513	-	72	59.452	ENSETEG00000008139	-	89	59.452	Echinops_telfairi
ENSDORG00000012513	-	54	80.952	ENSETEG00000018937	-	53	80.902	Echinops_telfairi
ENSDORG00000012513	-	53	79.841	ENSETEG00000014756	-	86	79.947	Echinops_telfairi
ENSDORG00000012513	-	89	76.672	ENSEASG00005008488	NCL	59	83.641	Equus_asinus_asinus
ENSDORG00000012513	-	91	77.390	ENSECAG00000021868	NCL	53	83.905	Equus_caballus
ENSDORG00000012513	-	85	73.510	ENSEEUG00000005913	NCL	54	79.630	Erinaceus_europaeus
ENSDORG00000012513	-	91	77.287	ENSFCAG00000027622	NCL	53	83.641	Felis_catus
ENSDORG00000012513	-	90	79.475	ENSFDAG00000014291	NCL	92	78.241	Fukomys_damarensis
ENSDORG00000012513	-	91	78.495	ENSGGOG00000004300	NCL	92	77.692	Gorilla_gorilla
ENSDORG00000012513	-	91	69.984	ENSHGLG00000011069	-	55	76.455	Heterocephalus_glaber_female
ENSDORG00000012513	-	91	78.374	ENSHGLG00000002031	-	92	77.147	Heterocephalus_glaber_female
ENSDORG00000012513	-	73	76.923	ENSHGLG00100000745	-	59	75.332	Heterocephalus_glaber_male
ENSDORG00000012513	-	91	77.454	ENSHGLG00100014537	-	92	76.227	Heterocephalus_glaber_male
ENSDORG00000012513	-	54	80.952	ENSJJAG00000016165	Ncl	53	81.283	Jaculus_jaculus
ENSDORG00000012513	-	91	78.681	ENSMFAG00000040385	NCL	92	76.805	Macaca_fascicularis
ENSDORG00000012513	-	91	78.681	ENSMMUG00000018094	NCL	92	76.805	Macaca_mulatta
ENSDORG00000012513	-	91	77.519	ENSMNEG00000023839	NCL	55	84.433	Macaca_nemestrina
ENSDORG00000012513	-	91	79.109	ENSMLEG00000028935	NCL	92	78.648	Mandrillus_leucophaeus
ENSDORG00000012513	-	91	78.067	ENSMICG00000002538	-	53	83.905	Microcebus_murinus
ENSDORG00000012513	-	91	64.363	ENSMICG00000029975	-	86	77.698	Microcebus_murinus
ENSDORG00000012513	-	91	77.710	MGP_CAROLIEiJ_G0014362	Ncl	53	85.979	Mus_caroli
ENSDORG00000012513	-	91	77.710	ENSMUSG00000026234	Ncl	53	86.243	Mus_musculus
ENSDORG00000012513	-	91	77.473	MGP_PahariEiJ_G0027599	Ncl	53	86.508	Mus_pahari
ENSDORG00000012513	-	91	76.677	MGP_SPRETEiJ_G0015164	Ncl	53	86.243	Mus_spretus
ENSDORG00000012513	-	91	76.444	ENSMLUG00000014547	NCL	53	84.433	Myotis_lucifugus
ENSDORG00000012513	-	91	79.728	ENSNGAG00000002454	-	53	89.418	Nannospalax_galili
ENSDORG00000012513	-	54	70.899	ENSNGAG00000006188	-	54	70.899	Nannospalax_galili
ENSDORG00000012513	-	86	67.222	ENSNLEG00000014107	-	52	71.384	Nomascus_leucogenys
ENSDORG00000012513	-	91	66.407	ENSODEG00000002441	-	93	73.729	Octodon_degus
ENSDORG00000012513	-	91	61.051	ENSODEG00000007803	-	90	59.783	Octodon_degus
ENSDORG00000012513	-	53	79.841	ENSODEG00000003281	-	53	79.894	Octodon_degus
ENSDORG00000012513	-	55	70.103	ENSOARG00000004072	-	61	70.157	Ovis_aries
ENSDORG00000012513	-	90	73.853	ENSOARG00000020709	-	56	84.031	Ovis_aries
ENSDORG00000012513	-	70	78.995	ENSOARG00000013710	-	64	82.322	Ovis_aries
ENSDORG00000012513	-	91	77.727	ENSPPAG00000011619	NCL	92	77.385	Pan_paniscus
ENSDORG00000012513	-	91	76.641	ENSPPRG00000012603	NCL	53	83.377	Panthera_pardus
ENSDORG00000012513	-	90	76.271	ENSPTIG00000010393	NCL	53	83.377	Panthera_tigris_altaica
ENSDORG00000012513	-	91	78.528	ENSPTRG00000013025	NCL	69	75.134	Pan_troglodytes
ENSDORG00000012513	-	91	78.681	ENSPANG00000010292	NCL	92	76.805	Papio_anubis
ENSDORG00000012513	-	92	72.714	ENSPPYG00000013265	NCL	54	75.827	Pongo_abelii
ENSDORG00000012513	-	91	78.681	ENSPCOG00000003051	-	91	75.535	Propithecus_coquereli
ENSDORG00000012513	-	91	73.261	ENSPCOG00000004160	-	93	78.836	Propithecus_coquereli
ENSDORG00000012513	-	91	77.710	ENSPVAG00000000297	NCL	92	76.840	Pteropus_vampyrus
ENSDORG00000012513	-	91	78.387	ENSRNOG00000018273	Ncl	53	87.302	Rattus_norvegicus
ENSDORG00000012513	-	67	84.459	ENSRBIG00000035396	-	90	82.951	Rhinopithecus_bieti
ENSDORG00000012513	-	92	75.915	ENSRBIG00000037525	-	55	82.642	Rhinopithecus_bieti
ENSDORG00000012513	-	95	75.260	ENSRROG00000036103	-	86	80.000	Rhinopithecus_roxellana
ENSDORG00000012513	-	91	78.154	ENSRROG00000028756	-	91	77.966	Rhinopithecus_roxellana
ENSDORG00000012513	-	91	72.601	ENSSBOG00000027549	-	91	72.050	Saimiri_boliviensis_boliviensis
ENSDORG00000012513	-	56	66.972	ENSSBOG00000023094	-	86	67.273	Saimiri_boliviensis_boliviensis
ENSDORG00000012513	-	54	83.905	ENSSBOG00000029193	-	53	83.905	Saimiri_boliviensis_boliviensis
ENSDORG00000012513	-	91	76.621	ENSSSCG00000016275	NCL	53	84.073	Sus_scrofa
ENSDORG00000012513	-	56	73.087	ENSTBEG00000001546	-	85	71.736	Tupaia_belangeri
ENSDORG00000012513	-	66	70.655	ENSTBEG00000002469	-	66	70.690	Tupaia_belangeri
ENSDORG00000012513	-	91	77.350	ENSTTRG00000009094	NCL	91	77.966	Tursiops_truncatus
ENSDORG00000012513	-	54	83.641	ENSUAMG00000005639	NCL	79	83.641	Ursus_americanus
ENSDORG00000012513	-	54	83.641	ENSUMAG00000015789	NCL	92	77.761	Ursus_maritimus
ENSDORG00000012513	-	69	80.986	ENSVPAG00000001796	NCL	69	78.986	Vicugna_pacos
ENSDORG00000012513	-	92	74.810	ENSVVUG00000025564	NCL	57	83.679	Vulpes_vulpes