EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSDORG00000012546 (Gene tree)
Gene ID: 105993029
Gene Symbol: Gpatch1
Alias: 1300003A17Rik|Gpatc1
Full Name: G-patch domain containing 1
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Plus strand
Length: 38387 bases
Position: chrKN672438.1:2696840-2735226
Accession: 105993029
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000011799	DUF1604	PF07713.13	4.4e-36	1	1
ENSDORP00000019257	DUF1604	PF07713.13	4.5e-36	1	1
ENSDORP00000019257	G-patch	PF01585.23	4.1e-07	1	1
ENSDORP00000011799	G-patch	PF01585.23	4.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000032936	-	2622	-	ENSDORP00000019257	873 (aa)	-	UPI000BAD2A4C
ENSDORT00000012547	-	2589	XM_013026161	ENSDORP00000011799	862 (aa)	XP_012881615	UPI000BAD160B

Gene Model

Click here to download ENSDORG00000012546's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000012546's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000012546	Gpatch1	95	81.221	ENSG00000076650	GPATCH1	94	81.350	Homo_sapiens
ENSDORG00000012546	Gpatch1	95	80.376	ENSAMEG00000015575	GPATCH1	94	79.954	Ailuropoda_melanoleuca
ENSDORG00000012546	Gpatch1	84	69.101	ENSAOCG00000006668	gpatch1	79	69.101	Amphiprion_ocellaris
ENSDORG00000012546	Gpatch1	84	51.111	ENSAPEG00000000026	gpatch1	90	48.786	Amphiprion_percula
ENSDORG00000012546	Gpatch1	93	48.398	ENSATEG00000014494	gpatch1	90	49.603	Anabas_testudineus
ENSDORG00000012546	Gpatch1	94	56.071	ENSAPLG00000007584	GPATCH1	96	57.548	Anas_platyrhynchos
ENSDORG00000012546	Gpatch1	95	80.986	ENSANAG00000027002	GPATCH1	94	80.892	Aotus_nancymaae
ENSDORG00000012546	Gpatch1	84	51.733	ENSACLG00000024740	gpatch1	81	51.368	Astatotilapia_calliptera
ENSDORG00000012546	Gpatch1	94	49.505	ENSAMXG00000020177	gpatch1	99	49.362	Astyanax_mexicanus
ENSDORG00000012546	Gpatch1	95	79.059	ENSBTAG00000000721	GPATCH1	94	78.809	Bos_taurus
ENSDORG00000012546	Gpatch1	95	80.611	ENSCJAG00000000684	GPATCH1	94	80.686	Callithrix_jacchus
ENSDORG00000012546	Gpatch1	95	79.812	ENSCAFG00000007457	GPATCH1	79	79.886	Canis_familiaris
ENSDORG00000012546	Gpatch1	99	78.508	ENSCAFG00020019731	GPATCH1	96	78.508	Canis_lupus_dingo
ENSDORG00000012546	Gpatch1	95	79.529	ENSCHIG00000019626	GPATCH1	94	79.267	Capra_hircus
ENSDORG00000012546	Gpatch1	91	73.058	ENSCAPG00000008827	GPATCH1	93	73.641	Cavia_aperea
ENSDORG00000012546	Gpatch1	95	75.410	ENSCPOG00000024477	GPATCH1	94	75.371	Cavia_porcellus
ENSDORG00000012546	Gpatch1	95	80.282	ENSCCAG00000024676	GPATCH1	94	80.892	Cebus_capucinus
ENSDORG00000012546	Gpatch1	95	81.455	ENSCATG00000043637	GPATCH1	94	81.579	Cercocebus_atys
ENSDORG00000012546	Gpatch1	93	75.540	ENSCLAG00000003395	-	94	75.976	Chinchilla_lanigera
ENSDORG00000012546	Gpatch1	95	79.318	ENSCSAG00000004743	GPATCH1	94	79.496	Chlorocebus_sabaeus
ENSDORG00000012546	Gpatch1	86	70.725	ENSCHOG00000012865	GPATCH1	89	70.725	Choloepus_hoffmanni
ENSDORG00000012546	Gpatch1	81	64.432	ENSCPBG00000000666	GPATCH1	97	62.612	Chrysemys_picta_bellii
ENSDORG00000012546	Gpatch1	84	34.610	ENSCING00000012518	-	95	34.634	Ciona_intestinalis
ENSDORG00000012546	Gpatch1	81	80.247	ENSCANG00000012540	GPATCH1	88	80.692	Colobus_angolensis_palliatus
ENSDORG00000012546	Gpatch1	91	74.580	ENSCGRG00001016736	Gpatch1	94	76.733	Cricetulus_griseus_chok1gshd
ENSDORG00000012546	Gpatch1	92	62.736	ENSCGRG00000005069	Gpatch1	93	62.959	Cricetulus_griseus_crigri
ENSDORG00000012546	Gpatch1	89	43.811	ENSCSEG00000019456	-	81	63.810	Cynoglossus_semilaevis
ENSDORG00000012546	Gpatch1	93	49.109	ENSDARG00000033418	gpatch1	94	47.803	Danio_rerio
ENSDORG00000012546	Gpatch1	94	78.420	ENSDNOG00000005291	GPATCH1	97	78.096	Dasypus_novemcinctus
ENSDORG00000012546	Gpatch1	53	44.012	FBgn0036386	CG8833	67	33.235	Drosophila_melanogaster
ENSDORG00000012546	Gpatch1	95	69.836	ENSETEG00000003626	GPATCH1	95	69.908	Echinops_telfairi
ENSDORG00000012546	Gpatch1	98	34.978	ENSEBUG00000011286	gpatch1	95	36.142	Eptatretus_burgeri
ENSDORG00000012546	Gpatch1	94	79.833	ENSEASG00005021162	GPATCH1	93	80.552	Equus_asinus_asinus
ENSDORG00000012546	Gpatch1	97	79.247	ENSECAG00000022743	GPATCH1	91	79.247	Equus_caballus
ENSDORG00000012546	Gpatch1	80	77.451	ENSEEUG00000012925	GPATCH1	77	77.451	Erinaceus_europaeus
ENSDORG00000012546	Gpatch1	94	48.509	ENSELUG00000018195	gpatch1	90	48.347	Esox_lucius
ENSDORG00000012546	Gpatch1	95	78.848	ENSFCAG00000014917	GPATCH1	94	78.833	Felis_catus
ENSDORG00000012546	Gpatch1	96	57.627	ENSFALG00000007821	GPATCH1	90	59.602	Ficedula_albicollis
ENSDORG00000012546	Gpatch1	92	77.234	ENSFDAG00000003871	GPATCH1	94	77.262	Fukomys_damarensis
ENSDORG00000012546	Gpatch1	84	47.253	ENSGMOG00000003830	gpatch1	95	46.402	Gadus_morhua
ENSDORG00000012546	Gpatch1	96	59.297	ENSGALG00000004839	GPATCH1	98	58.446	Gallus_gallus
ENSDORG00000012546	Gpatch1	94	46.922	ENSGACG00000017544	gpatch1	97	46.780	Gasterosteus_aculeatus
ENSDORG00000012546	Gpatch1	94	61.105	ENSGAGG00000010067	GPATCH1	94	60.565	Gopherus_agassizii
ENSDORG00000012546	Gpatch1	93	80.144	ENSGGOG00000010862	GPATCH1	94	80.919	Gorilla_gorilla
ENSDORG00000012546	Gpatch1	84	52.191	ENSHBUG00000023462	gpatch1	90	49.943	Haplochromis_burtoni
ENSDORG00000012546	Gpatch1	95	77.374	ENSHGLG00000009334	GPATCH1	94	77.740	Heterocephalus_glaber_female
ENSDORG00000012546	Gpatch1	95	77.491	ENSHGLG00100018074	GPATCH1	94	77.854	Heterocephalus_glaber_male
ENSDORG00000012546	Gpatch1	96	49.612	ENSIPUG00000014977	gpatch1	89	50.803	Ictalurus_punctatus
ENSDORG00000012546	Gpatch1	95	79.059	ENSSTOG00000003720	GPATCH1	94	79.152	Ictidomys_tridecemlineatus
ENSDORG00000012546	Gpatch1	95	77.385	ENSJJAG00000023765	Gpatch1	94	77.205	Jaculus_jaculus
ENSDORG00000012546	Gpatch1	93	49.709	ENSKMAG00000017950	gpatch1	89	49.942	Kryptolebias_marmoratus
ENSDORG00000012546	Gpatch1	84	49.372	ENSLBEG00000026527	gpatch1	88	48.140	Labrus_bergylta
ENSDORG00000012546	Gpatch1	91	54.762	ENSLACG00000008130	GPATCH1	92	53.998	Latimeria_chalumnae
ENSDORG00000012546	Gpatch1	84	54.107	ENSLOCG00000001800	gpatch1	90	52.028	Lepisosteus_oculatus
ENSDORG00000012546	Gpatch1	95	79.201	ENSLAFG00000013589	GPATCH1	94	78.694	Loxodonta_africana
ENSDORG00000012546	Gpatch1	94	80.896	ENSMFAG00000034418	GPATCH1	96	80.896	Macaca_fascicularis
ENSDORG00000012546	Gpatch1	95	81.125	ENSMMUG00000011790	GPATCH1	94	81.257	Macaca_mulatta
ENSDORG00000012546	Gpatch1	95	80.869	ENSMNEG00000045084	GPATCH1	94	81.007	Macaca_nemestrina
ENSDORG00000012546	Gpatch1	95	69.836	ENSMLEG00000043840	GPATCH1	93	70.252	Mandrillus_leucophaeus
ENSDORG00000012546	Gpatch1	84	51.733	ENSMZEG00005001926	gpatch1	82	51.368	Maylandia_zebra
ENSDORG00000012546	Gpatch1	94	59.836	ENSMGAG00000005775	GPATCH1	93	58.877	Meleagris_gallopavo
ENSDORG00000012546	Gpatch1	94	71.647	ENSMICG00000004829	GPATCH1	93	72.118	Microcebus_murinus
ENSDORG00000012546	Gpatch1	95	78.037	ENSMOCG00000000174	Gpatch1	95	77.062	Microtus_ochrogaster
ENSDORG00000012546	Gpatch1	79	50.070	ENSMMOG00000002140	gpatch1	87	48.280	Mola_mola
ENSDORG00000012546	Gpatch1	95	68.310	ENSMODG00000012226	GPATCH1	90	68.310	Monodelphis_domestica
ENSDORG00000012546	Gpatch1	93	48.519	ENSMALG00000014386	gpatch1	90	49.658	Monopterus_albus
ENSDORG00000012546	Gpatch1	96	79.374	ENSMUSG00000063808	Gpatch1	100	93.878	Mus_musculus
ENSDORG00000012546	Gpatch1	96	78.613	MGP_PahariEiJ_G0012816	Gpatch1	100	94.898	Mus_pahari
ENSDORG00000012546	Gpatch1	96	79.398	MGP_SPRETEiJ_G0030681	Gpatch1	100	94.898	Mus_spretus
ENSDORG00000012546	Gpatch1	95	79.436	ENSMPUG00000007658	GPATCH1	94	79.038	Mustela_putorius_furo
ENSDORG00000012546	Gpatch1	95	78.496	ENSMLUG00000012161	GPATCH1	94	78.351	Myotis_lucifugus
ENSDORG00000012546	Gpatch1	95	80.095	ENSNGAG00000012455	Gpatch1	94	79.769	Nannospalax_galili
ENSDORG00000012546	Gpatch1	95	80.986	ENSNLEG00000007659	GPATCH1	94	81.143	Nomascus_leucogenys
ENSDORG00000012546	Gpatch1	81	63.573	ENSMEUG00000015174	GPATCH1	77	63.573	Notamacropus_eugenii
ENSDORG00000012546	Gpatch1	95	75.000	ENSODEG00000007103	GPATCH1	94	75.629	Octodon_degus
ENSDORG00000012546	Gpatch1	84	52.350	ENSONIG00000003302	gpatch1	95	50.341	Oreochromis_niloticus
ENSDORG00000012546	Gpatch1	96	66.936	ENSOANG00000012732	GPATCH1	90	67.692	Ornithorhynchus_anatinus
ENSDORG00000012546	Gpatch1	95	79.436	ENSOCUG00000015905	GPATCH1	94	79.091	Oryctolagus_cuniculus
ENSDORG00000012546	Gpatch1	92	48.391	ENSORLG00000018706	gpatch1	87	48.391	Oryzias_latipes
ENSDORG00000012546	Gpatch1	76	50.941	ENSOMEG00000022688	gpatch1	89	48.642	Oryzias_melastigma
ENSDORG00000012546	Gpatch1	86	81.026	ENSOGAG00000004016	GPATCH1	98	81.026	Otolemur_garnettii
ENSDORG00000012546	Gpatch1	94	79.241	ENSOARG00000004365	GPATCH1	93	78.868	Ovis_aries
ENSDORG00000012546	Gpatch1	95	80.516	ENSPPAG00000020990	GPATCH1	94	80.664	Pan_paniscus
ENSDORG00000012546	Gpatch1	95	79.201	ENSPPRG00000017245	GPATCH1	94	79.176	Panthera_pardus
ENSDORG00000012546	Gpatch1	95	80.024	ENSPTIG00000019649	GPATCH1	94	79.977	Panthera_tigris_altaica
ENSDORG00000012546	Gpatch1	95	80.516	ENSPTRG00000010803	GPATCH1	94	80.664	Pan_troglodytes
ENSDORG00000012546	Gpatch1	95	81.455	ENSPANG00000012374	GPATCH1	98	81.579	Papio_anubis
ENSDORG00000012546	Gpatch1	89	52.358	ENSPKIG00000020745	gpatch1	90	49.889	Paramormyrops_kingsleyae
ENSDORG00000012546	Gpatch1	95	60.162	ENSPSIG00000013433	GPATCH1	94	59.800	Pelodiscus_sinensis
ENSDORG00000012546	Gpatch1	95	77.556	ENSPEMG00000000636	Gpatch1	94	76.818	Peromyscus_maniculatus_bairdii
ENSDORG00000012546	Gpatch1	95	68.427	ENSPCIG00000021003	GPATCH1	99	67.269	Phascolarctos_cinereus
ENSDORG00000012546	Gpatch1	76	46.991	ENSPREG00000008264	gpatch1	97	44.094	Poecilia_reticulata
ENSDORG00000012546	Gpatch1	95	79.545	ENSPPYG00000009824	GPATCH1	94	79.744	Pongo_abelii
ENSDORG00000012546	Gpatch1	88	74.882	ENSPCAG00000005931	GPATCH1	86	74.944	Procavia_capensis
ENSDORG00000012546	Gpatch1	97	73.678	ENSPCOG00000009674	GPATCH1	97	74.764	Propithecus_coquereli
ENSDORG00000012546	Gpatch1	86	82.222	ENSPVAG00000017767	GPATCH1	83	82.222	Pteropus_vampyrus
ENSDORG00000012546	Gpatch1	84	52.264	ENSPNYG00000018189	gpatch1	91	51.754	Pundamilia_nyererei
ENSDORG00000012546	Gpatch1	95	49.454	ENSPNAG00000013187	gpatch1	94	49.893	Pygocentrus_nattereri
ENSDORG00000012546	Gpatch1	96	78.538	ENSRNOG00000011584	Gpatch1	94	77.702	Rattus_norvegicus
ENSDORG00000012546	Gpatch1	96	72.948	ENSRBIG00000034723	GPATCH1	92	73.821	Rhinopithecus_bieti
ENSDORG00000012546	Gpatch1	95	81.103	ENSRROG00000024428	GPATCH1	94	81.236	Rhinopithecus_roxellana
ENSDORG00000012546	Gpatch1	95	80.869	ENSSBOG00000034650	GPATCH1	94	81.029	Saimiri_boliviensis_boliviensis
ENSDORG00000012546	Gpatch1	94	68.198	ENSSHAG00000016016	GPATCH1	94	66.781	Sarcophilus_harrisii
ENSDORG00000012546	Gpatch1	99	50.054	ENSSFOG00015011535	gpatch1	95	50.054	Scleropages_formosus
ENSDORG00000012546	Gpatch1	95	44.304	ENSSMAG00000002883	gpatch1	93	45.000	Scophthalmus_maximus
ENSDORG00000012546	Gpatch1	84	49.685	ENSSDUG00000007444	gpatch1	94	46.588	Seriola_dumerili
ENSDORG00000012546	Gpatch1	84	50.260	ENSSLDG00000002856	gpatch1	91	49.499	Seriola_lalandi_dorsalis
ENSDORG00000012546	Gpatch1	75	79.111	ENSSARG00000004108	GPATCH1	72	79.111	Sorex_araneus
ENSDORG00000012546	Gpatch1	95	79.882	ENSSSCG00000002865	GPATCH1	98	79.478	Sus_scrofa
ENSDORG00000012546	Gpatch1	96	59.332	ENSTGUG00000009401	GPATCH1	95	58.864	Taeniopygia_guttata
ENSDORG00000012546	Gpatch1	87	59.091	ENSTRUG00000005785	-	83	59.091	Takifugu_rubripes
ENSDORG00000012546	Gpatch1	87	59.091	ENSTRUG00000025081	gpatch1	83	59.091	Takifugu_rubripes
ENSDORG00000012546	Gpatch1	83	51.181	ENSTNIG00000002554	gpatch1	98	51.790	Tetraodon_nigroviridis
ENSDORG00000012546	Gpatch1	66	68.156	ENSTBEG00000007750	-	83	68.156	Tupaia_belangeri
ENSDORG00000012546	Gpatch1	94	73.341	ENSTTRG00000012221	GPATCH1	93	73.502	Tursiops_truncatus
ENSDORG00000012546	Gpatch1	94	79.810	ENSUMAG00000014645	GPATCH1	96	80.779	Ursus_maritimus
ENSDORG00000012546	Gpatch1	82	94.286	ENSVPAG00000010313	GPATCH1	88	94.565	Vicugna_pacos
ENSDORG00000012546	Gpatch1	99	78.174	ENSVVUG00000016572	GPATCH1	96	78.174	Vulpes_vulpes
ENSDORG00000012546	Gpatch1	96	49.369	ENSXETG00000018276	gpatch1	94	51.478	Xenopus_tropicalis