EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSDORG00000012605 (Gene tree)
Gene ID: 105992555
Gene Symbol: Ppargc1b
Alias: -
Full Name: PPARG coactivator 1 beta
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Minus strand
Length: 106303 bases
Position: chrKN672431.1:3186977-3293279
Accession: 105992555
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000011853	RRM_1	PF00076.22	7.8e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000012604	-	3587	XM_013025476	ENSDORP00000011853	980 (aa)	XP_012880930	A0A1S3FWI6

Gene Model

Click here to download ENSDORG00000012605's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000012605's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000012605	Ppargc1b	100	79.394	ENSG00000155846	PPARGC1B	100	79.192	Homo_sapiens
ENSDORG00000012605	Ppargc1b	100	76.135	ENSAMEG00000005287	PPARGC1B	100	75.459	Ailuropoda_melanoleuca
ENSDORG00000012605	Ppargc1b	99	45.533	ENSAPLG00000009977	PPARGC1B	99	46.176	Anas_platyrhynchos
ENSDORG00000012605	Ppargc1b	100	45.572	ENSACAG00000015737	PPARGC1B	99	45.295	Anolis_carolinensis
ENSDORG00000012605	Ppargc1b	100	79.373	ENSANAG00000021830	PPARGC1B	100	79.070	Aotus_nancymaae
ENSDORG00000012605	Ppargc1b	100	74.178	ENSBTAG00000012943	PPARGC1B	100	73.694	Bos_taurus
ENSDORG00000012605	Ppargc1b	100	79.656	ENSCJAG00000021113	PPARGC1B	100	75.272	Callithrix_jacchus
ENSDORG00000012605	Ppargc1b	100	76.329	ENSCAFG00000018275	PPARGC1B	100	75.942	Canis_familiaris
ENSDORG00000012605	Ppargc1b	100	79.317	ENSCAFG00020023524	PPARGC1B	100	78.916	Canis_lupus_dingo
ENSDORG00000012605	Ppargc1b	100	73.501	ENSCHIG00000004409	PPARGC1B	100	72.824	Capra_hircus
ENSDORG00000012605	Ppargc1b	97	70.145	ENSTSYG00000034354	PPARGC1B	100	69.938	Carlito_syrichta
ENSDORG00000012605	Ppargc1b	97	76.605	ENSCAPG00000008859	PPARGC1B	99	76.294	Cavia_aperea
ENSDORG00000012605	Ppargc1b	100	74.178	ENSCPOG00000001958	PPARGC1B	100	73.888	Cavia_porcellus
ENSDORG00000012605	Ppargc1b	100	79.939	ENSCCAG00000026909	PPARGC1B	100	79.838	Cebus_capucinus
ENSDORG00000012605	Ppargc1b	100	80.101	ENSCATG00000030402	PPARGC1B	100	79.899	Cercocebus_atys
ENSDORG00000012605	Ppargc1b	100	75.578	ENSCLAG00000015452	PPARGC1B	100	74.975	Chinchilla_lanigera
ENSDORG00000012605	Ppargc1b	97	76.072	ENSCSAG00000011792	PPARGC1B	100	76.271	Chlorocebus_sabaeus
ENSDORG00000012605	Ppargc1b	61	80.952	ENSCHOG00000005517	-	64	80.952	Choloepus_hoffmanni
ENSDORG00000012605	Ppargc1b	99	47.120	ENSCPBG00000007891	PPARGC1B	99	47.188	Chrysemys_picta_bellii
ENSDORG00000012605	Ppargc1b	100	79.435	ENSCANG00000037487	PPARGC1B	100	79.133	Colobus_angolensis_palliatus
ENSDORG00000012605	Ppargc1b	97	74.600	ENSCGRG00001017949	Ppargc1b	96	74.300	Cricetulus_griseus_chok1gshd
ENSDORG00000012605	Ppargc1b	98	73.952	ENSCGRG00000008387	Ppargc1b	99	73.653	Cricetulus_griseus_crigri
ENSDORG00000012605	Ppargc1b	57	42.276	ENSDARG00000101569	ppargc1b	70	43.548	Danio_rerio
ENSDORG00000012605	Ppargc1b	92	80.734	ENSDNOG00000005985	PPARGC1B	99	78.593	Dasypus_novemcinctus
ENSDORG00000012605	Ppargc1b	100	77.600	ENSEASG00005002826	PPARGC1B	100	77.200	Equus_asinus_asinus
ENSDORG00000012605	Ppargc1b	100	77.377	ENSECAG00000019769	PPARGC1B	82	77.277	Equus_caballus
ENSDORG00000012605	Ppargc1b	78	73.799	ENSEEUG00000014903	PPARGC1B	86	71.616	Erinaceus_europaeus
ENSDORG00000012605	Ppargc1b	80	33.085	ENSELUG00000014929	ppargc1b	80	37.234	Esox_lucius
ENSDORG00000012605	Ppargc1b	97	45.801	ENSFALG00000008858	PPARGC1B	99	45.631	Ficedula_albicollis
ENSDORG00000012605	Ppargc1b	97	71.627	ENSFDAG00000008719	PPARGC1B	99	71.627	Fukomys_damarensis
ENSDORG00000012605	Ppargc1b	99	45.933	ENSGAGG00000012870	PPARGC1B	99	45.899	Gopherus_agassizii
ENSDORG00000012605	Ppargc1b	56	46.154	ENSGAGG00000007043	PPARGC1A	69	43.802	Gopherus_agassizii
ENSDORG00000012605	Ppargc1b	99	77.157	ENSGGOG00000009505	PPARGC1B	99	78.008	Gorilla_gorilla
ENSDORG00000012605	Ppargc1b	84	75.478	ENSHGLG00000005967	PPARGC1B	100	73.204	Heterocephalus_glaber_female
ENSDORG00000012605	Ppargc1b	100	75.580	ENSHGLG00100010588	PPARGC1B	100	74.571	Heterocephalus_glaber_male
ENSDORG00000012605	Ppargc1b	100	77.286	ENSSTOG00000024758	PPARGC1B	100	76.612	Ictidomys_tridecemlineatus
ENSDORG00000012605	Ppargc1b	100	73.489	ENSJJAG00000018633	Ppargc1b	100	74.172	Jaculus_jaculus
ENSDORG00000012605	Ppargc1b	97	34.907	ENSLACG00000011232	PPARGC1B	93	50.633	Latimeria_chalumnae
ENSDORG00000012605	Ppargc1b	63	43.077	ENSLOCG00000012195	ppargc1b	78	43.077	Lepisosteus_oculatus
ENSDORG00000012605	Ppargc1b	97	72.250	ENSLAFG00000012339	PPARGC1B	99	71.817	Loxodonta_africana
ENSDORG00000012605	Ppargc1b	100	80.202	ENSMFAG00000042269	PPARGC1B	100	80.000	Macaca_fascicularis
ENSDORG00000012605	Ppargc1b	100	80.202	ENSMMUG00000004749	PPARGC1B	100	80.000	Macaca_mulatta
ENSDORG00000012605	Ppargc1b	100	80.101	ENSMNEG00000034121	PPARGC1B	100	79.899	Macaca_nemestrina
ENSDORG00000012605	Ppargc1b	97	76.471	ENSMLEG00000040973	PPARGC1B	100	76.271	Mandrillus_leucophaeus
ENSDORG00000012605	Ppargc1b	85	66.393	ENSMGAG00000003134	PPARGC1B	99	42.760	Meleagris_gallopavo
ENSDORG00000012605	Ppargc1b	100	74.294	ENSMAUG00000014191	Ppargc1b	100	74.489	Mesocricetus_auratus
ENSDORG00000012605	Ppargc1b	100	76.784	ENSMICG00000002702	PPARGC1B	100	76.923	Microcebus_murinus
ENSDORG00000012605	Ppargc1b	100	74.951	ENSMOCG00000014885	Ppargc1b	100	74.369	Microtus_ochrogaster
ENSDORG00000012605	Ppargc1b	98	53.912	ENSMODG00000009891	PPARGC1B	99	53.679	Monodelphis_domestica
ENSDORG00000012605	Ppargc1b	100	74.466	MGP_CAROLIEiJ_G0022323	Ppargc1b	100	74.757	Mus_caroli
ENSDORG00000012605	Ppargc1b	100	74.222	ENSMUSG00000033871	Ppargc1b	100	74.514	Mus_musculus
ENSDORG00000012605	Ppargc1b	100	73.481	MGP_PahariEiJ_G0019053	Ppargc1b	100	73.385	Mus_pahari
ENSDORG00000012605	Ppargc1b	100	74.586	MGP_SPRETEiJ_G0023235	Ppargc1b	100	74.197	Mus_spretus
ENSDORG00000012605	Ppargc1b	100	76.135	ENSMPUG00000014245	PPARGC1B	100	75.459	Mustela_putorius_furo
ENSDORG00000012605	Ppargc1b	91	67.712	ENSMLUG00000013169	PPARGC1B	100	66.458	Myotis_lucifugus
ENSDORG00000012605	Ppargc1b	99	74.538	ENSNGAG00000016998	Ppargc1b	99	73.858	Nannospalax_galili
ENSDORG00000012605	Ppargc1b	100	77.452	ENSNLEG00000010193	PPARGC1B	100	77.250	Nomascus_leucogenys
ENSDORG00000012605	Ppargc1b	97	69.461	ENSOPRG00000010017	PPARGC1B	99	68.962	Ochotona_princeps
ENSDORG00000012605	Ppargc1b	100	77.048	ENSODEG00000004901	PPARGC1B	100	75.733	Octodon_degus
ENSDORG00000012605	Ppargc1b	97	51.956	ENSOANG00000009368	PPARGC1B	99	51.349	Ornithorhynchus_anatinus
ENSDORG00000012605	Ppargc1b	97	72.020	ENSOCUG00000013833	PPARGC1B	100	71.626	Oryctolagus_cuniculus
ENSDORG00000012605	Ppargc1b	97	71.585	ENSOGAG00000015983	PPARGC1B	99	69.501	Otolemur_garnettii
ENSDORG00000012605	Ppargc1b	98	71.792	ENSOARG00000005658	PPARGC1B	98	70.911	Ovis_aries
ENSDORG00000012605	Ppargc1b	99	77.665	ENSPPAG00000035226	PPARGC1B	99	78.216	Pan_paniscus
ENSDORG00000012605	Ppargc1b	100	76.573	ENSPPRG00000004608	PPARGC1B	99	78.328	Panthera_pardus
ENSDORG00000012605	Ppargc1b	100	77.688	ENSPTIG00000007391	PPARGC1B	100	77.387	Panthera_tigris_altaica
ENSDORG00000012605	Ppargc1b	100	78.990	ENSPTRG00000017403	PPARGC1B	100	78.788	Pan_troglodytes
ENSDORG00000012605	Ppargc1b	100	80.000	ENSPANG00000009512	PPARGC1B	100	79.798	Papio_anubis
ENSDORG00000012605	Ppargc1b	99	46.553	ENSPSIG00000008358	PPARGC1B	99	46.837	Pelodiscus_sinensis
ENSDORG00000012605	Ppargc1b	100	75.607	ENSPEMG00000018822	Ppargc1b	100	75.413	Peromyscus_maniculatus_bairdii
ENSDORG00000012605	Ppargc1b	89	52.251	ENSPCIG00000020102	PPARGC1B	99	52.042	Phascolarctos_cinereus
ENSDORG00000012605	Ppargc1b	100	76.482	ENSPPYG00000015938	PPARGC1B	100	76.288	Pongo_abelii
ENSDORG00000012605	Ppargc1b	70	78.101	ENSPCAG00000012171	PPARGC1B	74	88.462	Procavia_capensis
ENSDORG00000012605	Ppargc1b	100	79.534	ENSPCOG00000024059	PPARGC1B	100	78.825	Propithecus_coquereli
ENSDORG00000012605	Ppargc1b	100	74.175	ENSPVAG00000001308	PPARGC1B	100	73.689	Pteropus_vampyrus
ENSDORG00000012605	Ppargc1b	51	53.333	ENSPNAG00000023871	ppargc1b	84	37.748	Pygocentrus_nattereri
ENSDORG00000012605	Ppargc1b	100	74.756	ENSRNOG00000017503	Ppargc1b	100	74.464	Rattus_norvegicus
ENSDORG00000012605	Ppargc1b	100	79.213	ENSRBIG00000036724	PPARGC1B	100	78.910	Rhinopithecus_bieti
ENSDORG00000012605	Ppargc1b	97	78.958	ENSRROG00000029594	PPARGC1B	97	78.446	Rhinopithecus_roxellana
ENSDORG00000012605	Ppargc1b	100	79.635	ENSSBOG00000028738	PPARGC1B	100	79.737	Saimiri_boliviensis_boliviensis
ENSDORG00000012605	Ppargc1b	99	53.169	ENSSHAG00000016400	PPARGC1B	99	52.980	Sarcophilus_harrisii
ENSDORG00000012605	Ppargc1b	51	51.261	ENSSFOG00015018522	ppargc1a	67	51.261	Scleropages_formosus
ENSDORG00000012605	Ppargc1b	99	46.139	ENSSPUG00000019271	PPARGC1B	99	45.861	Sphenodon_punctatus
ENSDORG00000012605	Ppargc1b	100	68.142	ENSSSCG00000014437	PPARGC1B	100	67.757	Sus_scrofa
ENSDORG00000012605	Ppargc1b	97	44.916	ENSTGUG00000000232	PPARGC1B	100	45.152	Taeniopygia_guttata
ENSDORG00000012605	Ppargc1b	99	74.951	ENSTTRG00000008430	PPARGC1B	100	74.359	Tursiops_truncatus
ENSDORG00000012605	Ppargc1b	99	77.901	ENSUMAG00000005361	PPARGC1B	99	76.589	Ursus_maritimus
ENSDORG00000012605	Ppargc1b	100	76.232	ENSVVUG00000014358	PPARGC1B	100	75.845	Vulpes_vulpes
ENSDORG00000012605	Ppargc1b	97	38.636	ENSXETG00000012711	ppargc1b	55	60.759	Xenopus_tropicalis