EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDORG00000012841 (Gene tree)
Gene ID: -
Gene Symbol: Sall4
Alias: 5730441M18Rik|C330011P20Rik|Tex20
Full Name: spalt like transcription factor 4
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Plus strand
Length: 11671 bases
Position: chrKN672421.1:5331616-5343286
Accession: 105991632
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000012074	zf-C2H2	PF00096.26	4.9e-27	1	6
ENSDORP00000012074	zf-C2H2	PF00096.26	4.9e-27	2	6
ENSDORP00000012074	zf-C2H2	PF00096.26	4.9e-27	3	6
ENSDORP00000012074	zf-C2H2	PF00096.26	4.9e-27	4	6
ENSDORP00000012074	zf-C2H2	PF00096.26	4.9e-27	5	6
ENSDORP00000012074	zf-C2H2	PF00096.26	4.9e-27	6	6
ENSDORP00000022446	zf-C2H2	PF00096.26	1.2e-12	1	2
ENSDORP00000022446	zf-C2H2	PF00096.26	1.2e-12	2	2
ENSDORP00000018325	zf-met	PF12874.7	3.4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000031043	-	1776	-	ENSDORP00000018325	591 (aa)	-	UPI000BAD07DF
ENSDORT00000025316	-	3138	-	ENSDORP00000022446	227 (aa)	-	UPI000BAD0912
ENSDORT00000012840	-	2997	XM_013024301	ENSDORP00000012074	998 (aa)	XP_012879755	UPI000BAD0FB2

Gene Model

Click here to download ENSDORG00000012841's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000012841's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDORG00000012841	Sall4	52	42.254	ENSDORG00000009396	Zfp354a	69	50.943
ENSDORG00000012841	Sall4	50	45.455	ENSDORG00000026133	-	79	56.604
ENSDORG00000012841	Sall4	50	46.939	ENSDORG00000016625	Zfp661	88	48.889
ENSDORG00000012841	Sall4	62	48.980	ENSDORG00000023595	Zfp35	85	48.980
ENSDORG00000012841	Sall4	89	63.462	ENSDORG00000002702	Sall3	89	52.174
ENSDORG00000012841	Sall4	52	41.071	ENSDORG00000027564	Zfp26	65	52.830
ENSDORG00000012841	Sall4	56	44.898	ENSDORG00000014484	Zfp334	71	43.137
ENSDORG00000012841	Sall4	54	46.000	ENSDORG00000009677	Zbtb48	50	54.348
ENSDORG00000012841	Sall4	52	44.898	ENSDORG00000024150	-	54	54.717
ENSDORG00000012841	Sall4	80	40.465	ENSDORG00000030154	Sall2	66	62.963
ENSDORG00000012841	Sall4	70	44.643	ENSDORG00000009702	Zfp574	65	47.917
ENSDORG00000012841	Sall4	50	44.231	ENSDORG00000007739	Prdm5	73	44.231

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000012841	Sall4	100	85.714	ENSG00000101115	SALL4	100	81.223	Homo_sapiens
ENSDORG00000012841	Sall4	89	67.308	ENSAPOG00000002465	sall4	100	40.708	Acanthochromis_polyacanthus
ENSDORG00000012841	Sall4	100	87.912	ENSAMEG00000013250	-	100	69.520	Ailuropoda_melanoleuca
ENSDORG00000012841	Sall4	100	75.676	ENSACIG00000017298	sall4	100	40.603	Amphilophus_citrinellus
ENSDORG00000012841	Sall4	89	67.308	ENSAOCG00000023678	sall4	100	41.349	Amphiprion_ocellaris
ENSDORG00000012841	Sall4	89	67.308	ENSAPEG00000000751	sall4	100	41.083	Amphiprion_percula
ENSDORG00000012841	Sall4	100	74.359	ENSATEG00000024480	sall4	100	41.301	Anabas_testudineus
ENSDORG00000012841	Sall4	100	82.716	ENSAPLG00000006498	SALL4	100	50.044	Anas_platyrhynchos
ENSDORG00000012841	Sall4	100	69.231	ENSACAG00000012748	SALL4	100	49.433	Anolis_carolinensis
ENSDORG00000012841	Sall4	100	86.813	ENSANAG00000023352	SALL4	100	71.092	Aotus_nancymaae
ENSDORG00000012841	Sall4	100	75.676	ENSACLG00000017851	sall4	100	42.462	Astatotilapia_calliptera
ENSDORG00000012841	Sall4	98	64.286	ENSAMXG00000001254	sall4	99	43.382	Astyanax_mexicanus
ENSDORG00000012841	Sall4	100	82.979	ENSBTAG00000003101	SALL4	100	67.760	Bos_taurus
ENSDORG00000012841	Sall4	100	81.140	ENSCJAG00000000591	SALL4	99	73.122	Callithrix_jacchus
ENSDORG00000012841	Sall4	100	89.011	ENSCAFG00000011738	-	100	69.840	Canis_familiaris
ENSDORG00000012841	Sall4	100	89.011	ENSCAFG00020021870	SALL4	100	69.840	Canis_lupus_dingo
ENSDORG00000012841	Sall4	100	85.714	ENSCHIG00000026270	SALL4	100	67.290	Capra_hircus
ENSDORG00000012841	Sall4	100	87.912	ENSTSYG00000007359	SALL4	100	79.039	Carlito_syrichta
ENSDORG00000012841	Sall4	94	87.912	ENSCAPG00000012135	SALL4	97	70.129	Cavia_aperea
ENSDORG00000012841	Sall4	100	78.414	ENSCPOG00000036300	-	85	77.586	Cavia_porcellus
ENSDORG00000012841	Sall4	100	83.516	ENSCCAG00000029512	-	100	69.213	Cebus_capucinus
ENSDORG00000012841	Sall4	100	86.813	ENSCATG00000030757	SALL4	100	71.657	Cercocebus_atys
ENSDORG00000012841	Sall4	100	90.698	ENSCLAG00000010479	SALL4	100	70.142	Chinchilla_lanigera
ENSDORG00000012841	Sall4	100	86.813	ENSCSAG00000015269	SALL4	100	71.657	Chlorocebus_sabaeus
ENSDORG00000012841	Sall4	100	83.333	ENSCPBG00000014995	SALL4	100	50.798	Chrysemys_picta_bellii
ENSDORG00000012841	Sall4	100	86.813	ENSCANG00000036463	SALL4	100	71.375	Colobus_angolensis_palliatus
ENSDORG00000012841	Sall4	100	88.372	ENSCGRG00001019569	Sall4	100	71.967	Cricetulus_griseus_chok1gshd
ENSDORG00000012841	Sall4	100	88.372	ENSCGRG00000000462	Sall4	100	80.247	Cricetulus_griseus_crigri
ENSDORG00000012841	Sall4	100	76.316	ENSCSEG00000014604	sall4	100	41.459	Cynoglossus_semilaevis
ENSDORG00000012841	Sall4	100	74.359	ENSCVAG00000010815	sall4	100	42.133	Cyprinodon_variegatus
ENSDORG00000012841	Sall4	99	78.378	ENSDARG00000044485	sall4	99	43.624	Danio_rerio
ENSDORG00000012841	Sall4	99	78.603	ENSDNOG00000040633	SALL4	100	69.209	Dasypus_novemcinctus
ENSDORG00000012841	Sall4	99	71.179	ENSETEG00000012475	-	64	70.370	Echinops_telfairi
ENSDORG00000012841	Sall4	100	86.813	ENSECAG00000018533	SALL4	100	71.563	Equus_caballus
ENSDORG00000012841	Sall4	100	87.356	ENSEEUG00000003649	SALL4	99	66.635	Erinaceus_europaeus
ENSDORG00000012841	Sall4	100	71.605	ENSELUG00000005696	sall4	100	41.141	Esox_lucius
ENSDORG00000012841	Sall4	100	79.825	ENSFCAG00000002822	SALL4	100	69.643	Felis_catus
ENSDORG00000012841	Sall4	100	72.000	ENSFALG00000013149	SALL4	100	51.764	Ficedula_albicollis
ENSDORG00000012841	Sall4	100	79.787	ENSFDAG00000017812	SALL4	100	68.962	Fukomys_damarensis
ENSDORG00000012841	Sall4	100	75.325	ENSFHEG00000014187	sall4	100	43.188	Fundulus_heteroclitus
ENSDORG00000012841	Sall4	100	72.152	ENSGMOG00000003822	sall4	100	40.691	Gadus_morhua
ENSDORG00000012841	Sall4	100	81.928	ENSGALG00000041365	SALL4	100	51.062	Gallus_gallus
ENSDORG00000012841	Sall4	100	77.027	ENSGAFG00000019925	sall4	100	42.972	Gambusia_affinis
ENSDORG00000012841	Sall4	100	78.378	ENSGACG00000011124	sall4	62	78.378	Gasterosteus_aculeatus
ENSDORG00000012841	Sall4	100	82.143	ENSGAGG00000002297	SALL4	100	50.310	Gopherus_agassizii
ENSDORG00000012841	Sall4	100	86.813	ENSGGOG00000001832	SALL4	100	71.563	Gorilla_gorilla
ENSDORG00000012841	Sall4	100	75.676	ENSHBUG00000007327	sall4	100	42.284	Haplochromis_burtoni
ENSDORG00000012841	Sall4	96	85.714	ENSHGLG00000009043	SALL4	97	71.720	Heterocephalus_glaber_female
ENSDORG00000012841	Sall4	96	85.714	ENSHGLG00100002722	SALL4	97	71.623	Heterocephalus_glaber_male
ENSDORG00000012841	Sall4	100	75.676	ENSHCOG00000008519	sall4	100	40.672	Hippocampus_comes
ENSDORG00000012841	Sall4	97	64.286	ENSIPUG00000019170	sall4	99	42.416	Ictalurus_punctatus
ENSDORG00000012841	Sall4	100	82.096	ENSSTOG00000025002	SALL4	100	92.958	Ictidomys_tridecemlineatus
ENSDORG00000012841	Sall4	100	89.011	ENSJJAG00000020688	Sall4	99	88.732	Jaculus_jaculus
ENSDORG00000012841	Sall4	100	60.345	ENSKMAG00000002501	sall4	100	42.030	Kryptolebias_marmoratus
ENSDORG00000012841	Sall4	100	73.171	ENSLBEG00000019951	sall4	100	42.325	Labrus_bergylta
ENSDORG00000012841	Sall4	100	58.333	ENSLACG00000013898	SALL4	100	57.778	Latimeria_chalumnae
ENSDORG00000012841	Sall4	100	74.684	ENSLOCG00000002427	sall4	100	44.987	Lepisosteus_oculatus
ENSDORG00000012841	Sall4	100	89.011	ENSLAFG00000004309	SALL4	100	69.915	Loxodonta_africana
ENSDORG00000012841	Sall4	100	86.813	ENSMFAG00000027169	SALL4	100	71.563	Macaca_fascicularis
ENSDORG00000012841	Sall4	100	80.702	ENSMMUG00000003870	SALL4	100	80.786	Macaca_mulatta
ENSDORG00000012841	Sall4	100	80.702	ENSMNEG00000035995	SALL4	100	72.651	Macaca_nemestrina
ENSDORG00000012841	Sall4	100	86.813	ENSMLEG00000030467	SALL4	100	71.469	Mandrillus_leucophaeus
ENSDORG00000012841	Sall4	100	78.378	ENSMAMG00000005223	sall4	100	41.161	Mastacembelus_armatus
ENSDORG00000012841	Sall4	100	75.676	ENSMZEG00005023418	sall4	100	42.386	Maylandia_zebra
ENSDORG00000012841	Sall4	77	80.952	ENSMGAG00000009344	SALL4	99	65.385	Meleagris_gallopavo
ENSDORG00000012841	Sall4	100	86.517	ENSMAUG00000015814	Sall4	100	75.904	Mesocricetus_auratus
ENSDORG00000012841	Sall4	100	87.912	ENSMICG00000000027	SALL4	100	72.306	Microcebus_murinus
ENSDORG00000012841	Sall4	100	86.316	ENSMOCG00000018245	Sall4	100	89.041	Microtus_ochrogaster
ENSDORG00000012841	Sall4	100	77.027	ENSMMOG00000014929	sall4	100	41.763	Mola_mola
ENSDORG00000012841	Sall4	100	65.385	ENSMODG00000016387	SALL4	97	52.989	Monodelphis_domestica
ENSDORG00000012841	Sall4	100	71.951	ENSMALG00000018709	sall4	100	40.825	Monopterus_albus
ENSDORG00000012841	Sall4	100	85.393	MGP_CAROLIEiJ_G0024723	Sall4	100	88.889	Mus_caroli
ENSDORG00000012841	Sall4	100	86.517	ENSMUSG00000027547	Sall4	100	88.889	Mus_musculus
ENSDORG00000012841	Sall4	100	87.640	MGP_PahariEiJ_G0026164	Sall4	100	90.278	Mus_pahari
ENSDORG00000012841	Sall4	100	86.517	MGP_SPRETEiJ_G0025643	Sall4	100	88.889	Mus_spretus
ENSDORG00000012841	Sall4	100	87.912	ENSMPUG00000017543	SALL4	96	69.643	Mustela_putorius_furo
ENSDORG00000012841	Sall4	99	67.033	ENSMLUG00000028073	-	99	50.665	Myotis_lucifugus
ENSDORG00000012841	Sall4	94	83.516	ENSMLUG00000007060	-	100	68.271	Myotis_lucifugus
ENSDORG00000012841	Sall4	100	81.319	ENSMLUG00000008405	-	100	62.476	Myotis_lucifugus
ENSDORG00000012841	Sall4	100	85.714	ENSNGAG00000017833	Sall4	100	70.416	Nannospalax_galili
ENSDORG00000012841	Sall4	100	75.676	ENSNBRG00000001829	sall4	100	42.260	Neolamprologus_brichardi
ENSDORG00000012841	Sall4	100	86.813	ENSNLEG00000007013	SALL4	100	71.657	Nomascus_leucogenys
ENSDORG00000012841	Sall4	69	88.158	ENSMEUG00000005793	-	99	65.385	Notamacropus_eugenii
ENSDORG00000012841	Sall4	100	85.714	ENSOPRG00000011640	SALL4	100	69.528	Ochotona_princeps
ENSDORG00000012841	Sall4	100	75.676	ENSONIG00000016557	sall4	100	42.578	Oreochromis_niloticus
ENSDORG00000012841	Sall4	100	77.320	ENSOANG00000008667	SALL4	97	53.613	Ornithorhynchus_anatinus
ENSDORG00000012841	Sall4	94	86.813	ENSOCUG00000011797	SALL4	100	70.337	Oryctolagus_cuniculus
ENSDORG00000012841	Sall4	100	77.027	ENSORLG00000016130	sall4	100	41.808	Oryzias_latipes
ENSDORG00000012841	Sall4	100	77.027	ENSORLG00020007339	sall4	100	41.540	Oryzias_latipes_hni
ENSDORG00000012841	Sall4	100	77.027	ENSORLG00015002265	sall4	100	41.667	Oryzias_latipes_hsok
ENSDORG00000012841	Sall4	100	77.027	ENSOMEG00000017344	sall4	100	41.956	Oryzias_melastigma
ENSDORG00000012841	Sall4	100	81.579	ENSOGAG00000013799	SALL4	100	71.415	Otolemur_garnettii
ENSDORG00000012841	Sall4	100	84.615	ENSOARG00000014570	SALL4	100	65.828	Ovis_aries
ENSDORG00000012841	Sall4	100	86.813	ENSPPAG00000038064	SALL4	100	71.469	Pan_paniscus
ENSDORG00000012841	Sall4	100	80.263	ENSPPRG00000008677	SALL4	100	69.549	Panthera_pardus
ENSDORG00000012841	Sall4	100	86.813	ENSPTRG00000013631	SALL4	100	71.469	Pan_troglodytes
ENSDORG00000012841	Sall4	100	80.702	ENSPANG00000021792	SALL4	100	72.651	Papio_anubis
ENSDORG00000012841	Sall4	100	51.020	ENSPKIG00000007074	sall4	100	42.349	Paramormyrops_kingsleyae
ENSDORG00000012841	Sall4	100	83.951	ENSPSIG00000009066	SALL4	100	49.956	Pelodiscus_sinensis
ENSDORG00000012841	Sall4	100	78.261	ENSPMGG00000022551	sall4	100	41.122	Periophthalmus_magnuspinnatus
ENSDORG00000012841	Sall4	100	87.640	ENSPEMG00000022706	Sall4	100	90.278	Peromyscus_maniculatus_bairdii
ENSDORG00000012841	Sall4	100	89.189	ENSPCIG00000022838	SALL4	97	51.185	Phascolarctos_cinereus
ENSDORG00000012841	Sall4	100	75.325	ENSPFOG00000001442	sall4	100	42.422	Poecilia_formosa
ENSDORG00000012841	Sall4	100	75.325	ENSPLAG00000008760	sall4	100	42.511	Poecilia_latipinna
ENSDORG00000012841	Sall4	100	75.325	ENSPMEG00000008497	sall4	100	42.181	Poecilia_mexicana
ENSDORG00000012841	Sall4	100	75.325	ENSPREG00000021140	sall4	100	42.194	Poecilia_reticulata
ENSDORG00000012841	Sall4	100	86.813	ENSPPYG00000011138	SALL4	100	71.065	Pongo_abelii
ENSDORG00000012841	Sall4	100	86.813	ENSPCAG00000004726	SALL4	99	65.377	Procavia_capensis
ENSDORG00000012841	Sall4	100	86.813	ENSPCOG00000016321	SALL4	100	71.577	Propithecus_coquereli
ENSDORG00000012841	Sall4	89	85.714	ENSPVAG00000002075	SALL4	94	69.386	Pteropus_vampyrus
ENSDORG00000012841	Sall4	100	75.676	ENSPNYG00000021738	sall4	100	41.993	Pundamilia_nyererei
ENSDORG00000012841	Sall4	97	64.286	ENSPNAG00000020929	sall4	99	42.769	Pygocentrus_nattereri
ENSDORG00000012841	Sall4	100	89.535	ENSRNOG00000050035	Sall4	99	73.878	Rattus_norvegicus
ENSDORG00000012841	Sall4	100	86.813	ENSRBIG00000039876	SALL4	100	72.338	Rhinopithecus_bieti
ENSDORG00000012841	Sall4	100	86.813	ENSRROG00000036585	SALL4	100	71.281	Rhinopithecus_roxellana
ENSDORG00000012841	Sall4	100	86.813	ENSSBOG00000030011	SALL4	100	70.500	Saimiri_boliviensis_boliviensis
ENSDORG00000012841	Sall4	100	88.158	ENSSHAG00000018013	SALL4	88	63.033	Sarcophilus_harrisii
ENSDORG00000012841	Sall4	100	75.676	ENSSFOG00015021075	sall4	100	42.194	Scleropages_formosus
ENSDORG00000012841	Sall4	100	73.171	ENSSMAG00000019218	sall4	99	41.416	Scophthalmus_maximus
ENSDORG00000012841	Sall4	100	77.027	ENSSDUG00000004657	sall4	100	41.306	Seriola_dumerili
ENSDORG00000012841	Sall4	100	77.027	ENSSLDG00000004973	sall4	100	41.748	Seriola_lalandi_dorsalis
ENSDORG00000012841	Sall4	100	77.027	ENSSPAG00000001978	sall4	100	41.349	Stegastes_partitus
ENSDORG00000012841	Sall4	100	87.912	ENSSSCG00000007479	SALL4	100	69.643	Sus_scrofa
ENSDORG00000012841	Sall4	100	61.345	ENSTGUG00000018244	-	84	62.917	Taeniopygia_guttata
ENSDORG00000012841	Sall4	100	76.923	ENSTRUG00000007410	sall4	100	42.068	Takifugu_rubripes
ENSDORG00000012841	Sall4	100	75.641	ENSTNIG00000012460	sall4	100	41.494	Tetraodon_nigroviridis
ENSDORG00000012841	Sall4	94	86.813	ENSTTRG00000007753	SALL4	99	68.276	Tursiops_truncatus
ENSDORG00000012841	Sall4	100	87.912	ENSUAMG00000010113	SALL4	100	69.426	Ursus_americanus
ENSDORG00000012841	Sall4	94	87.912	ENSUMAG00000024274	SALL4	99	69.531	Ursus_maritimus
ENSDORG00000012841	Sall4	100	79.487	ENSXETG00000012326	sall4	100	46.359	Xenopus_tropicalis
ENSDORG00000012841	Sall4	100	75.325	ENSXCOG00000015467	sall4	100	40.073	Xiphophorus_couchianus
ENSDORG00000012841	Sall4	100	75.325	ENSXMAG00000012692	sall4	100	40.110	Xiphophorus_maculatus