EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDORG00000012847 (Gene tree)
Gene ID: 105983710
Gene Symbol: Ddx1
Alias: -
Full Name: DEAD-box helicase 1
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Minus strand
Length: 29750 bases
Position: chrKN672366.1:17474168-17503917
Accession: 105983710
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000012080	DEAD	PF00270.29	2.2e-80	1	1
ENSDORP00000026556	DEAD	PF00270.29	2.2e-80	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000012847	-	2211	-	ENSDORP00000012080	736 (aa)	-	UPI000BAD10CB
ENSDORT00000029323	-	2477	XM_013013691	ENSDORP00000026556	740 (aa)	XP_012869145	A0A1S3EZ21

Gene Model

Click here to download ENSDORG00000012847's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000012847's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDORG00000012847	Ddx1	51	41.667	ENSDORG00000028868	Ddx28	67	40.984
ENSDORG00000012847	Ddx1	54	40.909	ENSDORG00000004301	Ddx49	77	40.909
ENSDORG00000012847	Ddx1	55	41.509	ENSDORG00000004276	Ddx52	60	41.509
ENSDORG00000012847	Ddx1	56	40.580	ENSDORG00000010781	Ddx41	57	40.580

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000012847	Ddx1	100	97.973	ENSG00000079785	DDX1	100	97.973	Homo_sapiens
ENSDORG00000012847	Ddx1	100	84.459	ENSAPOG00000003166	ddx1	100	84.459	Acanthochromis_polyacanthus
ENSDORG00000012847	Ddx1	99	97.970	ENSAMEG00000001071	DDX1	99	97.970	Ailuropoda_melanoleuca
ENSDORG00000012847	Ddx1	89	83.206	ENSACIG00000017422	ddx1	99	82.595	Amphilophus_citrinellus
ENSDORG00000012847	Ddx1	89	83.131	ENSAOCG00000015436	ddx1	94	84.591	Amphiprion_ocellaris
ENSDORG00000012847	Ddx1	100	85.676	ENSAPEG00000007699	ddx1	100	85.676	Amphiprion_percula
ENSDORG00000012847	Ddx1	94	84.384	ENSATEG00000003965	ddx1	98	83.969	Anabas_testudineus
ENSDORG00000012847	Ddx1	100	92.473	ENSAPLG00000011093	DDX1	100	92.473	Anas_platyrhynchos
ENSDORG00000012847	Ddx1	94	90.974	ENSACAG00000011036	DDX1	99	90.974	Anolis_carolinensis
ENSDORG00000012847	Ddx1	100	98.243	ENSANAG00000037912	DDX1	100	98.243	Aotus_nancymaae
ENSDORG00000012847	Ddx1	99	84.605	ENSACLG00000008850	ddx1	99	83.639	Astatotilapia_calliptera
ENSDORG00000012847	Ddx1	100	84.865	ENSAMXG00000002100	ddx1	100	84.865	Astyanax_mexicanus
ENSDORG00000012847	Ddx1	100	97.432	ENSBTAG00000009906	DDX1	100	97.432	Bos_taurus
ENSDORG00000012847	Ddx1	98	47.312	WBGene00021938	Y55F3BR.1	98	47.312	Caenorhabditis_elegans
ENSDORG00000012847	Ddx1	100	98.243	ENSCJAG00000007076	DDX1	100	98.243	Callithrix_jacchus
ENSDORG00000012847	Ddx1	100	98.243	ENSCAFG00000003686	DDX1	100	98.243	Canis_familiaris
ENSDORG00000012847	Ddx1	100	98.243	ENSCAFG00020026083	DDX1	100	98.243	Canis_lupus_dingo
ENSDORG00000012847	Ddx1	100	97.432	ENSCHIG00000011046	DDX1	100	97.432	Capra_hircus
ENSDORG00000012847	Ddx1	100	98.514	ENSTSYG00000002477	-	100	98.514	Carlito_syrichta
ENSDORG00000012847	Ddx1	99	69.878	ENSTSYG00000037396	-	98	73.222	Carlito_syrichta
ENSDORG00000012847	Ddx1	87	77.090	ENSCAPG00000008906	-	93	77.090	Cavia_aperea
ENSDORG00000012847	Ddx1	88	95.100	ENSCPOG00000009816	-	96	95.100	Cavia_porcellus
ENSDORG00000012847	Ddx1	68	96.813	ENSCPOG00000032467	-	100	96.813	Cavia_porcellus
ENSDORG00000012847	Ddx1	100	98.243	ENSCCAG00000030085	DDX1	100	98.243	Cebus_capucinus
ENSDORG00000012847	Ddx1	100	98.108	ENSCATG00000033924	DDX1	100	98.108	Cercocebus_atys
ENSDORG00000012847	Ddx1	100	97.703	ENSCLAG00000005434	DDX1	100	97.703	Chinchilla_lanigera
ENSDORG00000012847	Ddx1	100	98.108	ENSCSAG00000007883	DDX1	100	98.108	Chlorocebus_sabaeus
ENSDORG00000012847	Ddx1	74	98.100	ENSCHOG00000002171	DDX1	74	98.100	Choloepus_hoffmanni
ENSDORG00000012847	Ddx1	100	87.110	ENSCPBG00000013330	DDX1	99	92.593	Chrysemys_picta_bellii
ENSDORG00000012847	Ddx1	100	65.684	ENSCING00000001176	-	100	65.508	Ciona_intestinalis
ENSDORG00000012847	Ddx1	98	60.302	ENSCSAVG00000003028	-	99	60.302	Ciona_savignyi
ENSDORG00000012847	Ddx1	100	97.973	ENSCANG00000031530	DDX1	100	97.973	Colobus_angolensis_palliatus
ENSDORG00000012847	Ddx1	100	98.649	ENSCGRG00001013025	Ddx1	100	98.649	Cricetulus_griseus_chok1gshd
ENSDORG00000012847	Ddx1	100	98.649	ENSCGRG00000000676	Ddx1	100	98.649	Cricetulus_griseus_crigri
ENSDORG00000012847	Ddx1	99	84.469	ENSCSEG00000002630	ddx1	100	84.469	Cynoglossus_semilaevis
ENSDORG00000012847	Ddx1	99	84.332	ENSCVAG00000020927	ddx1	100	84.332	Cyprinodon_variegatus
ENSDORG00000012847	Ddx1	100	84.459	ENSDARG00000032117	ddx1	100	84.469	Danio_rerio
ENSDORG00000012847	Ddx1	100	97.838	ENSDNOG00000006905	DDX1	100	97.838	Dasypus_novemcinctus
ENSDORG00000012847	Ddx1	98	59.234	FBgn0015075	Ddx1	99	59.781	Drosophila_melanogaster
ENSDORG00000012847	Ddx1	100	86.757	ENSETEG00000014259	DDX1	100	86.757	Echinops_telfairi
ENSDORG00000012847	Ddx1	64	77.754	ENSEBUG00000009800	-	99	77.754	Eptatretus_burgeri
ENSDORG00000012847	Ddx1	100	97.838	ENSEASG00005009335	DDX1	92	97.838	Equus_asinus_asinus
ENSDORG00000012847	Ddx1	95	97.848	ENSECAG00000016396	DDX1	100	97.848	Equus_caballus
ENSDORG00000012847	Ddx1	89	94.539	ENSEEUG00000001606	DDX1	89	94.539	Erinaceus_europaeus
ENSDORG00000012847	Ddx1	100	82.321	ENSELUG00000006743	ddx1	100	82.321	Esox_lucius
ENSDORG00000012847	Ddx1	100	98.514	ENSFCAG00000004680	DDX1	100	98.514	Felis_catus
ENSDORG00000012847	Ddx1	100	92.162	ENSFALG00000008696	DDX1	100	92.162	Ficedula_albicollis
ENSDORG00000012847	Ddx1	100	97.703	ENSFDAG00000021305	DDX1	100	97.703	Fukomys_damarensis
ENSDORG00000012847	Ddx1	100	83.243	ENSFHEG00000008444	ddx1	100	83.243	Fundulus_heteroclitus
ENSDORG00000012847	Ddx1	100	81.023	ENSGMOG00000011300	ddx1	100	81.023	Gadus_morhua
ENSDORG00000012847	Ddx1	100	93.514	ENSGALG00000016461	DDX1	100	93.514	Gallus_gallus
ENSDORG00000012847	Ddx1	100	84.054	ENSGAFG00000004706	ddx1	100	84.054	Gambusia_affinis
ENSDORG00000012847	Ddx1	100	82.432	ENSGACG00000011162	ddx1	100	82.432	Gasterosteus_aculeatus
ENSDORG00000012847	Ddx1	100	93.649	ENSGAGG00000021020	DDX1	100	93.649	Gopherus_agassizii
ENSDORG00000012847	Ddx1	100	97.973	ENSGGOG00000012482	DDX1	100	97.973	Gorilla_gorilla
ENSDORG00000012847	Ddx1	100	84.459	ENSHBUG00000014069	ddx1	100	84.459	Haplochromis_burtoni
ENSDORG00000012847	Ddx1	100	97.838	ENSHGLG00000000801	DDX1	100	97.838	Heterocephalus_glaber_female
ENSDORG00000012847	Ddx1	99	97.820	ENSHGLG00100000711	DDX1	100	97.820	Heterocephalus_glaber_male
ENSDORG00000012847	Ddx1	100	83.784	ENSHCOG00000011492	ddx1	96	83.784	Hippocampus_comes
ENSDORG00000012847	Ddx1	100	83.108	ENSIPUG00000003494	ddx1	100	83.108	Ictalurus_punctatus
ENSDORG00000012847	Ddx1	100	99.185	ENSSTOG00000003977	DDX1	100	99.455	Ictidomys_tridecemlineatus
ENSDORG00000012847	Ddx1	89	93.893	ENSJJAG00000013315	Ddx1	100	93.893	Jaculus_jaculus
ENSDORG00000012847	Ddx1	100	85.946	ENSKMAG00000011340	ddx1	100	85.946	Kryptolebias_marmoratus
ENSDORG00000012847	Ddx1	89	79.237	ENSLBEG00000008692	ddx1	99	79.237	Labrus_bergylta
ENSDORG00000012847	Ddx1	100	87.432	ENSLACG00000010529	DDX1	100	87.432	Latimeria_chalumnae
ENSDORG00000012847	Ddx1	100	86.863	ENSLOCG00000016473	ddx1	100	86.863	Lepisosteus_oculatus
ENSDORG00000012847	Ddx1	99	97.422	ENSLAFG00000002213	DDX1	99	97.422	Loxodonta_africana
ENSDORG00000012847	Ddx1	100	98.108	ENSMFAG00000033987	DDX1	100	98.108	Macaca_fascicularis
ENSDORG00000012847	Ddx1	100	98.108	ENSMMUG00000023437	DDX1	100	98.108	Macaca_mulatta
ENSDORG00000012847	Ddx1	100	98.108	ENSMNEG00000029189	DDX1	100	98.108	Macaca_nemestrina
ENSDORG00000012847	Ddx1	100	97.973	ENSMLEG00000030787	DDX1	100	97.973	Mandrillus_leucophaeus
ENSDORG00000012847	Ddx1	100	85.000	ENSMAMG00000015916	ddx1	100	85.000	Mastacembelus_armatus
ENSDORG00000012847	Ddx1	99	84.605	ENSMZEG00005015207	ddx1	99	83.639	Maylandia_zebra
ENSDORG00000012847	Ddx1	99	89.295	ENSMGAG00000014025	DDX1	100	89.295	Meleagris_gallopavo
ENSDORG00000012847	Ddx1	64	98.182	ENSMAUG00000016156	Ddx1	100	98.182	Mesocricetus_auratus
ENSDORG00000012847	Ddx1	100	98.514	ENSMICG00000001023	DDX1	100	98.514	Microcebus_murinus
ENSDORG00000012847	Ddx1	100	98.649	ENSMOCG00000000257	Ddx1	100	98.649	Microtus_ochrogaster
ENSDORG00000012847	Ddx1	89	83.079	ENSMMOG00000015397	ddx1	99	83.079	Mola_mola
ENSDORG00000012847	Ddx1	99	95.232	ENSMODG00000010275	DDX1	99	95.232	Monodelphis_domestica
ENSDORG00000012847	Ddx1	100	84.459	ENSMALG00000016409	ddx1	100	84.459	Monopterus_albus
ENSDORG00000012847	Ddx1	100	98.784	MGP_CAROLIEiJ_G0017622	Ddx1	100	98.784	Mus_caroli
ENSDORG00000012847	Ddx1	100	98.108	ENSMUSG00000037149	Ddx1	100	98.108	Mus_musculus
ENSDORG00000012847	Ddx1	100	98.514	MGP_PahariEiJ_G0029378	Ddx1	100	98.514	Mus_pahari
ENSDORG00000012847	Ddx1	100	98.108	MGP_SPRETEiJ_G0018464	Ddx1	100	98.108	Mus_spretus
ENSDORG00000012847	Ddx1	100	98.378	ENSMPUG00000013606	DDX1	100	98.378	Mustela_putorius_furo
ENSDORG00000012847	Ddx1	99	97.418	ENSMLUG00000003027	DDX1	98	97.418	Myotis_lucifugus
ENSDORG00000012847	Ddx1	99	99.046	ENSNGAG00000015783	Ddx1	100	99.046	Nannospalax_galili
ENSDORG00000012847	Ddx1	79	80.104	ENSNBRG00000020677	ddx1	94	80.104	Neolamprologus_brichardi
ENSDORG00000012847	Ddx1	100	98.108	ENSNLEG00000014417	DDX1	100	98.108	Nomascus_leucogenys
ENSDORG00000012847	Ddx1	99	93.297	ENSMEUG00000008254	DDX1	99	93.297	Notamacropus_eugenii
ENSDORG00000012847	Ddx1	92	83.616	ENSOPRG00000004290	DDX1	100	70.135	Ochotona_princeps
ENSDORG00000012847	Ddx1	100	97.703	ENSODEG00000000569	DDX1	100	97.703	Octodon_degus
ENSDORG00000012847	Ddx1	100	85.155	ENSONIG00000000513	ddx1	100	85.155	Oreochromis_niloticus
ENSDORG00000012847	Ddx1	76	93.190	ENSOANG00000005450	DDX1	99	93.190	Ornithorhynchus_anatinus
ENSDORG00000012847	Ddx1	100	98.649	ENSOCUG00000007010	DDX1	100	98.649	Oryctolagus_cuniculus
ENSDORG00000012847	Ddx1	100	84.595	ENSORLG00000016709	ddx1	100	84.595	Oryzias_latipes
ENSDORG00000012847	Ddx1	99	84.332	ENSORLG00020003290	ddx1	100	84.332	Oryzias_latipes_hni
ENSDORG00000012847	Ddx1	100	84.189	ENSORLG00015022438	ddx1	100	84.189	Oryzias_latipes_hsok
ENSDORG00000012847	Ddx1	100	79.730	ENSOMEG00000017620	ddx1	100	78.243	Oryzias_melastigma
ENSDORG00000012847	Ddx1	99	98.098	ENSOGAG00000008730	DDX1	100	98.098	Otolemur_garnettii
ENSDORG00000012847	Ddx1	99	97.147	ENSOARG00000016369	DDX1	100	97.147	Ovis_aries
ENSDORG00000012847	Ddx1	100	97.838	ENSPPAG00000027432	DDX1	100	97.838	Pan_paniscus
ENSDORG00000012847	Ddx1	100	98.514	ENSPPRG00000020556	DDX1	100	98.514	Panthera_pardus
ENSDORG00000012847	Ddx1	100	98.378	ENSPTIG00000008267	DDX1	100	98.378	Panthera_tigris_altaica
ENSDORG00000012847	Ddx1	100	97.838	ENSPTRG00000011670	DDX1	100	97.838	Pan_troglodytes
ENSDORG00000012847	Ddx1	100	98.243	ENSPANG00000025185	DDX1	100	98.243	Papio_anubis
ENSDORG00000012847	Ddx1	100	83.514	ENSPKIG00000012466	ddx1	100	83.651	Paramormyrops_kingsleyae
ENSDORG00000012847	Ddx1	54	91.067	ENSPSIG00000012292	DDX1	100	91.067	Pelodiscus_sinensis
ENSDORG00000012847	Ddx1	100	82.297	ENSPMGG00000000782	ddx1	100	80.811	Periophthalmus_magnuspinnatus
ENSDORG00000012847	Ddx1	100	98.108	ENSPEMG00000016389	Ddx1	100	98.108	Peromyscus_maniculatus_bairdii
ENSDORG00000012847	Ddx1	99	79.484	ENSPMAG00000009118	-	100	79.484	Petromyzon_marinus
ENSDORG00000012847	Ddx1	100	95.946	ENSPCIG00000010941	DDX1	100	95.946	Phascolarctos_cinereus
ENSDORG00000012847	Ddx1	100	84.189	ENSPFOG00000011921	ddx1	100	84.189	Poecilia_formosa
ENSDORG00000012847	Ddx1	87	82.737	ENSPFOG00000006873	-	100	82.737	Poecilia_formosa
ENSDORG00000012847	Ddx1	100	84.189	ENSPLAG00000005939	ddx1	100	84.189	Poecilia_latipinna
ENSDORG00000012847	Ddx1	100	84.459	ENSPMEG00000011140	ddx1	100	84.459	Poecilia_mexicana
ENSDORG00000012847	Ddx1	100	84.054	ENSPREG00000011751	ddx1	100	84.054	Poecilia_reticulata
ENSDORG00000012847	Ddx1	100	97.973	ENSPPYG00000012638	DDX1	100	97.973	Pongo_abelii
ENSDORG00000012847	Ddx1	100	83.784	ENSPCAG00000001491	DDX1	100	83.784	Procavia_capensis
ENSDORG00000012847	Ddx1	100	95.924	ENSPCOG00000028185	DDX1	100	95.924	Propithecus_coquereli
ENSDORG00000012847	Ddx1	100	97.703	ENSPVAG00000013618	DDX1	100	97.703	Pteropus_vampyrus
ENSDORG00000012847	Ddx1	100	84.459	ENSPNYG00000013839	ddx1	100	84.459	Pundamilia_nyererei
ENSDORG00000012847	Ddx1	89	83.053	ENSPNAG00000017033	ddx1	97	83.053	Pygocentrus_nattereri
ENSDORG00000012847	Ddx1	100	98.649	ENSRNOG00000006652	Ddx1	100	98.649	Rattus_norvegicus
ENSDORG00000012847	Ddx1	100	96.892	ENSRBIG00000041664	DDX1	100	97.280	Rhinopithecus_bieti
ENSDORG00000012847	Ddx1	100	97.703	ENSRROG00000031167	DDX1	100	97.703	Rhinopithecus_roxellana
ENSDORG00000012847	Ddx1	100	98.378	ENSSBOG00000027577	DDX1	100	98.378	Saimiri_boliviensis_boliviensis
ENSDORG00000012847	Ddx1	99	87.466	ENSSHAG00000009363	DDX1	99	87.466	Sarcophilus_harrisii
ENSDORG00000012847	Ddx1	100	82.973	ENSSFOG00015014476	ddx1	100	82.973	Scleropages_formosus
ENSDORG00000012847	Ddx1	100	83.108	ENSSMAG00000010094	ddx1	100	83.108	Scophthalmus_maximus
ENSDORG00000012847	Ddx1	100	84.459	ENSSDUG00000012334	ddx1	100	84.459	Seriola_dumerili
ENSDORG00000012847	Ddx1	100	83.919	ENSSLDG00000025345	ddx1	100	83.919	Seriola_lalandi_dorsalis
ENSDORG00000012847	Ddx1	99	87.057	ENSSARG00000004536	DDX1	100	87.057	Sorex_araneus
ENSDORG00000012847	Ddx1	100	90.811	ENSSPUG00000018835	DDX1	100	90.811	Sphenodon_punctatus
ENSDORG00000012847	Ddx1	100	80.000	ENSSPAG00000023554	ddx1	100	80.000	Stegastes_partitus
ENSDORG00000012847	Ddx1	100	97.432	ENSSSCG00000008619	DDX1	100	97.432	Sus_scrofa
ENSDORG00000012847	Ddx1	100	92.027	ENSTGUG00000013096	DDX1	100	92.027	Taeniopygia_guttata
ENSDORG00000012847	Ddx1	99	83.740	ENSTRUG00000015765	ddx1	99	83.740	Takifugu_rubripes
ENSDORG00000012847	Ddx1	100	84.054	ENSTNIG00000016309	ddx1	100	84.054	Tetraodon_nigroviridis
ENSDORG00000012847	Ddx1	99	94.278	ENSTBEG00000008454	DDX1	100	94.278	Tupaia_belangeri
ENSDORG00000012847	Ddx1	100	96.757	ENSTTRG00000005081	DDX1	100	96.757	Tursiops_truncatus
ENSDORG00000012847	Ddx1	71	85.094	ENSUAMG00000017375	DDX1	93	85.094	Ursus_americanus
ENSDORG00000012847	Ddx1	99	98.365	ENSUMAG00000023450	DDX1	100	98.365	Ursus_maritimus
ENSDORG00000012847	Ddx1	85	98.100	ENSVPAG00000007764	DDX1	85	98.100	Vicugna_pacos
ENSDORG00000012847	Ddx1	99	98.231	ENSVVUG00000013085	DDX1	96	98.231	Vulpes_vulpes
ENSDORG00000012847	Ddx1	100	90.135	ENSXETG00000017825	ddx1	100	90.135	Xenopus_tropicalis
ENSDORG00000012847	Ddx1	100	81.258	ENSXCOG00000007082	ddx1	100	81.258	Xiphophorus_couchianus
ENSDORG00000012847	Ddx1	100	83.784	ENSXMAG00000004555	ddx1	100	83.784	Xiphophorus_maculatus