EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDORG00000012949 (Gene tree)
Gene ID: 105990567
Gene Symbol: Pcca
Alias: C79630
Full Name: propionyl-CoA carboxylase subunit alpha
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Minus strand
Length: 300850 bases
Position: chrKN672411.1:5348123-5648972
Accession: 105990567
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000012175	RimK	PF08443.11	5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000012950	-	1926	XM_013023003	ENSDORP00000012175	641 (aa)	XP_012878457	UPI000BAD1EC5
ENSDORT00000027149	-	1887	-	ENSDORP00000020898	628 (aa)	-	UPI000BAD1AC2

Gene Model

Click here to download ENSDORG00000012949's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000012949's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDORG00000012949	Pcca	65	47.191	ENSDORG00000000473	Mccc1	63	47.191

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000012949	Pcca	100	75.778	ENSG00000175198	PCCA	99	92.405	Homo_sapiens
ENSDORG00000012949	Pcca	86	61.978	ENSAPOG00000002389	pcca	100	66.770	Acanthochromis_polyacanthus
ENSDORG00000012949	Pcca	84	77.373	ENSAMEG00000016627	PCCA	99	77.373	Ailuropoda_melanoleuca
ENSDORG00000012949	Pcca	69	82.254	ENSACIG00000015913	PCCA	98	66.941	Amphilophus_citrinellus
ENSDORG00000012949	Pcca	95	62.089	ENSAOCG00000005451	pcca	98	66.953	Amphiprion_ocellaris
ENSDORG00000012949	Pcca	95	61.912	ENSAPEG00000002955	pcca	98	67.096	Amphiprion_percula
ENSDORG00000012949	Pcca	96	66.195	ENSATEG00000004273	pcca	99	66.195	Anabas_testudineus
ENSDORG00000012949	Pcca	93	73.043	ENSAPLG00000002609	PCCA	100	73.043	Anas_platyrhynchos
ENSDORG00000012949	Pcca	100	71.081	ENSANAG00000031162	PCCA	95	77.707	Aotus_nancymaae
ENSDORG00000012949	Pcca	95	67.811	ENSACLG00000006725	pcca	97	67.811	Astatotilapia_calliptera
ENSDORG00000012949	Pcca	100	74.899	ENSBTAG00000010672	PCCA	100	74.899	Bos_taurus
ENSDORG00000012949	Pcca	100	75.507	ENSCJAG00000020998	PCCA	100	75.507	Callithrix_jacchus
ENSDORG00000012949	Pcca	100	75.876	ENSCAFG00000005838	PCCA	100	75.876	Canis_familiaris
ENSDORG00000012949	Pcca	100	75.876	ENSCAFG00020022683	PCCA	100	75.876	Canis_lupus_dingo
ENSDORG00000012949	Pcca	100	74.899	ENSCHIG00000007335	PCCA	100	74.899	Capra_hircus
ENSDORG00000012949	Pcca	94	78.066	ENSTSYG00000000053	PCCA	95	78.261	Carlito_syrichta
ENSDORG00000012949	Pcca	100	76.049	ENSCPOG00000011274	PCCA	100	76.049	Cavia_porcellus
ENSDORG00000012949	Pcca	100	75.778	ENSCCAG00000022253	PCCA	100	75.778	Cebus_capucinus
ENSDORG00000012949	Pcca	100	76.590	ENSCATG00000034177	PCCA	100	76.590	Cercocebus_atys
ENSDORG00000012949	Pcca	100	76.590	ENSCLAG00000003205	PCCA	100	76.590	Chinchilla_lanigera
ENSDORG00000012949	Pcca	100	76.725	ENSCSAG00000017493	PCCA	100	76.725	Chlorocebus_sabaeus
ENSDORG00000012949	Pcca	89	81.416	ENSCHOG00000000247	PCCA	90	81.416	Choloepus_hoffmanni
ENSDORG00000012949	Pcca	93	73.973	ENSCPBG00000018046	PCCA	96	73.973	Chrysemys_picta_bellii
ENSDORG00000012949	Pcca	92	56.769	ENSCING00000008081	-	95	57.396	Ciona_intestinalis
ENSDORG00000012949	Pcca	90	58.410	ENSCSAVG00000011361	-	100	58.410	Ciona_savignyi
ENSDORG00000012949	Pcca	100	76.590	ENSCANG00000013062	PCCA	100	76.590	Colobus_angolensis_palliatus
ENSDORG00000012949	Pcca	100	75.204	ENSCGRG00001015819	Pcca	100	75.204	Cricetulus_griseus_chok1gshd
ENSDORG00000012949	Pcca	97	75.593	ENSCGRG00000014796	Pcca	100	74.560	Cricetulus_griseus_crigri
ENSDORG00000012949	Pcca	95	65.951	ENSCSEG00000016645	pcca	98	65.951	Cynoglossus_semilaevis
ENSDORG00000012949	Pcca	83	68.109	ENSCVAG00000010430	pcca	100	68.109	Cyprinodon_variegatus
ENSDORG00000012949	Pcca	100	75.372	ENSDNOG00000042384	PCCA	100	76.708	Dasypus_novemcinctus
ENSDORG00000012949	Pcca	100	77.328	ENSEASG00005022166	PCCA	100	77.328	Equus_asinus_asinus
ENSDORG00000012949	Pcca	98	77.241	ENSECAG00000018952	PCCA	100	77.193	Equus_caballus
ENSDORG00000012949	Pcca	89	67.273	ENSELUG00000002383	pcca	100	67.273	Esox_lucius
ENSDORG00000012949	Pcca	100	76.923	ENSFCAG00000012573	PCCA	100	76.923	Felis_catus
ENSDORG00000012949	Pcca	100	76.319	ENSFDAG00000005817	PCCA	97	76.184	Fukomys_damarensis
ENSDORG00000012949	Pcca	95	67.190	ENSFHEG00000011811	pcca	99	67.190	Fundulus_heteroclitus
ENSDORG00000012949	Pcca	95	66.904	ENSGAFG00000011218	pcca	99	66.904	Gambusia_affinis
ENSDORG00000012949	Pcca	87	68.000	ENSGACG00000002342	pcca	100	68.154	Gasterosteus_aculeatus
ENSDORG00000012949	Pcca	84	73.993	ENSGAGG00000010472	PCCA	96	73.826	Gopherus_agassizii
ENSDORG00000012949	Pcca	100	76.049	ENSGGOG00000012516	PCCA	100	76.049	Gorilla_gorilla
ENSDORG00000012949	Pcca	100	75.913	ENSHGLG00000011057	PCCA	100	75.913	Heterocephalus_glaber_female
ENSDORG00000012949	Pcca	100	75.913	ENSHGLG00100001468	PCCA	100	75.913	Heterocephalus_glaber_male
ENSDORG00000012949	Pcca	95	65.093	ENSHCOG00000016098	pcca	100	65.528	Hippocampus_comes
ENSDORG00000012949	Pcca	94	78.788	ENSSTOG00000021045	PCCA	100	78.788	Ictidomys_tridecemlineatus
ENSDORG00000012949	Pcca	100	76.022	ENSJJAG00000011150	Pcca	100	76.022	Jaculus_jaculus
ENSDORG00000012949	Pcca	94	68.012	ENSKMAG00000014632	pcca	99	66.948	Kryptolebias_marmoratus
ENSDORG00000012949	Pcca	86	72.981	ENSLACG00000012828	PCCA	100	72.981	Latimeria_chalumnae
ENSDORG00000012949	Pcca	90	77.395	ENSLAFG00000014958	PCCA	100	77.395	Loxodonta_africana
ENSDORG00000012949	Pcca	100	76.455	ENSMFAG00000020427	PCCA	100	76.455	Macaca_fascicularis
ENSDORG00000012949	Pcca	100	76.319	ENSMMUG00000004493	PCCA	100	76.319	Macaca_mulatta
ENSDORG00000012949	Pcca	100	76.455	ENSMNEG00000045261	PCCA	100	76.455	Macaca_nemestrina
ENSDORG00000012949	Pcca	100	76.455	ENSMLEG00000033842	PCCA	100	76.455	Mandrillus_leucophaeus
ENSDORG00000012949	Pcca	96	65.537	ENSMAMG00000009304	pcca	99	65.537	Mastacembelus_armatus
ENSDORG00000012949	Pcca	95	67.811	ENSMZEG00005018487	pcca	97	67.811	Maylandia_zebra
ENSDORG00000012949	Pcca	56	75.359	ENSMGAG00000014892	PCCA	99	75.359	Meleagris_gallopavo
ENSDORG00000012949	Pcca	84	78.254	ENSMAUG00000000626	Pcca	93	78.254	Mesocricetus_auratus
ENSDORG00000012949	Pcca	68	80.952	ENSMICG00000038258	-	89	79.918	Microcebus_murinus
ENSDORG00000012949	Pcca	100	77.537	ENSMICG00000010685	-	100	77.537	Microcebus_murinus
ENSDORG00000012949	Pcca	100	77.273	ENSMOCG00000015156	Pcca	99	79.148	Microtus_ochrogaster
ENSDORG00000012949	Pcca	94	66.859	ENSMALG00000009947	pcca	100	66.212	Monopterus_albus
ENSDORG00000012949	Pcca	100	76.871	MGP_CAROLIEiJ_G0019618	Pcca	100	76.871	Mus_caroli
ENSDORG00000012949	Pcca	100	76.776	ENSMUSG00000041650	Pcca	100	76.776	Mus_musculus
ENSDORG00000012949	Pcca	100	76.567	MGP_PahariEiJ_G0030634	Pcca	100	76.567	Mus_pahari
ENSDORG00000012949	Pcca	100	76.639	MGP_SPRETEiJ_G0020515	Pcca	100	76.639	Mus_spretus
ENSDORG00000012949	Pcca	92	78.102	ENSMPUG00000011333	PCCA	100	78.102	Mustela_putorius_furo
ENSDORG00000012949	Pcca	80	74.048	ENSMLUG00000005729	PCCA	96	74.913	Myotis_lucifugus
ENSDORG00000012949	Pcca	100	71.467	ENSNGAG00000016528	Pcca	100	71.603	Nannospalax_galili
ENSDORG00000012949	Pcca	87	64.789	ENSNBRG00000019075	pcca	98	64.148	Neolamprologus_brichardi
ENSDORG00000012949	Pcca	100	75.300	ENSODEG00000010667	PCCA	100	75.300	Octodon_degus
ENSDORG00000012949	Pcca	95	67.954	ENSONIG00000013151	pcca	97	67.954	Oreochromis_niloticus
ENSDORG00000012949	Pcca	88	75.151	ENSOCUG00000017230	PCCA	96	75.151	Oryctolagus_cuniculus
ENSDORG00000012949	Pcca	95	64.731	ENSORLG00000000361	pcca	99	65.483	Oryzias_latipes
ENSDORG00000012949	Pcca	95	64.731	ENSORLG00020005749	pcca	99	65.625	Oryzias_latipes_hni
ENSDORG00000012949	Pcca	95	64.548	ENSORLG00015012738	pcca	99	65.439	Oryzias_latipes_hsok
ENSDORG00000012949	Pcca	95	64.823	ENSOMEG00000001912	pcca	99	69.388	Oryzias_melastigma
ENSDORG00000012949	Pcca	100	76.725	ENSOGAG00000017088	PCCA	100	76.725	Otolemur_garnettii
ENSDORG00000012949	Pcca	86	76.935	ENSOARG00000004442	PCCA	100	76.935	Ovis_aries
ENSDORG00000012949	Pcca	100	75.913	ENSPPAG00000036841	PCCA	100	75.913	Pan_paniscus
ENSDORG00000012949	Pcca	100	76.923	ENSPPRG00000006626	PCCA	100	76.923	Panthera_pardus
ENSDORG00000012949	Pcca	84	77.778	ENSPTIG00000009732	PCCA	100	77.778	Panthera_tigris_altaica
ENSDORG00000012949	Pcca	100	75.778	ENSPTRG00000006001	PCCA	100	75.778	Pan_troglodytes
ENSDORG00000012949	Pcca	91	71.280	ENSPKIG00000004765	pcca	95	71.280	Paramormyrops_kingsleyae
ENSDORG00000012949	Pcca	86	71.894	ENSPSIG00000009154	PCCA	100	71.739	Pelodiscus_sinensis
ENSDORG00000012949	Pcca	100	75.749	ENSPEMG00000009083	Pcca	100	75.749	Peromyscus_maniculatus_bairdii
ENSDORG00000012949	Pcca	100	74.432	ENSPCIG00000027261	PCCA	100	74.432	Phascolarctos_cinereus
ENSDORG00000012949	Pcca	95	67.190	ENSPFOG00000014855	pcca	99	67.190	Poecilia_formosa
ENSDORG00000012949	Pcca	95	67.190	ENSPLAG00000016583	pcca	99	67.190	Poecilia_latipinna
ENSDORG00000012949	Pcca	95	67.047	ENSPMEG00000011613	pcca	99	67.047	Poecilia_mexicana
ENSDORG00000012949	Pcca	88	68.493	ENSPREG00000007537	pcca	100	68.341	Poecilia_reticulata
ENSDORG00000012949	Pcca	100	76.049	ENSPPYG00000005473	PCCA	100	76.049	Pongo_abelii
ENSDORG00000012949	Pcca	100	74.831	ENSPCOG00000015321	PCCA	100	74.831	Propithecus_coquereli
ENSDORG00000012949	Pcca	89	67.221	ENSPNYG00000008226	pcca	100	67.221	Pundamilia_nyererei
ENSDORG00000012949	Pcca	94	67.960	ENSPNAG00000011078	pcca	98	68.300	Pygocentrus_nattereri
ENSDORG00000012949	Pcca	100	79.745	ENSRROG00000030936	PCCA	100	79.745	Rhinopithecus_roxellana
ENSDORG00000012949	Pcca	100	76.184	ENSSBOG00000020005	PCCA	100	76.184	Saimiri_boliviensis_boliviensis
ENSDORG00000012949	Pcca	51	87.106	ENSSHAG00000014732	-	100	87.106	Sarcophilus_harrisii
ENSDORG00000012949	Pcca	95	69.814	ENSSFOG00015021986	pcca	98	69.814	Scleropages_formosus
ENSDORG00000012949	Pcca	86	67.547	ENSSMAG00000018126	pcca	100	67.547	Scophthalmus_maximus
ENSDORG00000012949	Pcca	96	66.478	ENSSDUG00000021326	pcca	99	66.478	Seriola_dumerili
ENSDORG00000012949	Pcca	96	66.478	ENSSLDG00000016568	pcca	99	66.478	Seriola_lalandi_dorsalis
ENSDORG00000012949	Pcca	84	70.223	ENSSPUG00000006036	PCCA	96	70.223	Sphenodon_punctatus
ENSDORG00000012949	Pcca	91	63.947	ENSSPAG00000022191	pcca	92	63.947	Stegastes_partitus
ENSDORG00000012949	Pcca	100	75.424	ENSSSCG00000009522	PCCA	100	75.424	Sus_scrofa
ENSDORG00000012949	Pcca	93	70.435	ENSTGUG00000010915	PCCA	100	70.435	Taeniopygia_guttata
ENSDORG00000012949	Pcca	96	66.856	ENSTRUG00000004990	pcca	99	66.856	Takifugu_rubripes
ENSDORG00000012949	Pcca	100	72.948	ENSTTRG00000002569	PCCA	100	72.948	Tursiops_truncatus
ENSDORG00000012949	Pcca	84	88.889	ENSUMAG00000023453	PCCA	100	77.864	Ursus_maritimus
ENSDORG00000012949	Pcca	100	79.267	ENSVVUG00000013550	PCCA	100	79.267	Vulpes_vulpes
ENSDORG00000012949	Pcca	88	67.732	ENSXCOG00000014159	pcca	100	67.732	Xiphophorus_couchianus
ENSDORG00000012949	Pcca	95	66.904	ENSXMAG00000014869	pcca	99	66.904	Xiphophorus_maculatus