EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSDORG00000013001 (Gene tree)
Gene ID: 105993092
Gene Symbol: Rbm42
Alias: 1700003D06Rik|3100004P22Rik
Full Name: RNA binding motif protein 42
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Plus strand
Length: 8190 bases
Position: chrKN672438.1:3878977-3887166
Accession: 105993092
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000012222	RRM_1	PF00076.22	5e-18	1	1
ENSDORP00000016434	RRM_1	PF00076.22	5.4e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000013002	-	1350	-	ENSDORP00000012222	449 (aa)	-	UPI000BAD0E50
ENSDORT00000026500	-	1639	XM_013026240	ENSDORP00000016434	478 (aa)	XP_012881694	UPI000BAD22F3

Gene Model

Click here to download ENSDORG00000013001's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000013001's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000013001	Rbm42	99	96.674	ENSG00000126254	RBM42	97	100.000	Homo_sapiens
ENSDORG00000013001	Rbm42	99	96.868	ENSAMEG00000000524	RBM42	100	96.868	Ailuropoda_melanoleuca
ENSDORG00000013001	Rbm42	99	97.065	ENSANAG00000027537	RBM42	100	97.065	Aotus_nancymaae
ENSDORG00000013001	Rbm42	99	96.646	ENSBTAG00000013440	RBM42	100	96.646	Bos_taurus
ENSDORG00000013001	Rbm42	99	97.321	ENSCJAG00000010220	RBM42	100	97.321	Callithrix_jacchus
ENSDORG00000013001	Rbm42	99	90.147	ENSCAFG00020018628	RBM42	94	93.846	Canis_lupus_dingo
ENSDORG00000013001	Rbm42	99	96.652	ENSCHIG00000009518	RBM42	100	96.652	Capra_hircus
ENSDORG00000013001	Rbm42	99	96.444	ENSTSYG00000014688	RBM42	97	100.000	Carlito_syrichta
ENSDORG00000013001	Rbm42	81	97.668	ENSCAPG00000009566	RBM42	99	97.668	Cavia_aperea
ENSDORG00000013001	Rbm42	100	96.681	ENSCPOG00000012365	RBM42	100	96.681	Cavia_porcellus
ENSDORG00000013001	Rbm42	99	97.275	ENSCCAG00000034440	RBM42	100	97.275	Cebus_capucinus
ENSDORG00000013001	Rbm42	99	96.639	ENSCATG00000041924	RBM42	97	100.000	Cercocebus_atys
ENSDORG00000013001	Rbm42	100	96.460	ENSCLAG00000012865	RBM42	100	96.460	Chinchilla_lanigera
ENSDORG00000013001	Rbm42	99	96.452	ENSCSAG00000004422	RBM42	100	96.452	Chlorocebus_sabaeus
ENSDORG00000013001	Rbm42	99	87.975	ENSCANG00000030272	RBM42	100	87.975	Colobus_angolensis_palliatus
ENSDORG00000013001	Rbm42	100	97.105	ENSCGRG00001018540	Rbm42	100	97.105	Cricetulus_griseus_chok1gshd
ENSDORG00000013001	Rbm42	99	95.833	ENSDNOG00000037397	RBM42	100	95.833	Dasypus_novemcinctus
ENSDORG00000013001	Rbm42	75	87.879	ENSETEG00000007878	RBM42	72	86.667	Echinops_telfairi
ENSDORG00000013001	Rbm42	99	98.202	ENSEASG00005001074	RBM42	100	98.202	Equus_asinus_asinus
ENSDORG00000013001	Rbm42	99	98.202	ENSECAG00000018215	RBM42	100	98.202	Equus_caballus
ENSDORG00000013001	Rbm42	99	97.065	ENSFCAG00000006376	RBM42	100	97.065	Felis_catus
ENSDORG00000013001	Rbm42	100	96.674	ENSFDAG00000007440	RBM42	100	96.674	Fukomys_damarensis
ENSDORG00000013001	Rbm42	99	96.842	ENSGGOG00000009972	RBM42	97	100.000	Gorilla_gorilla
ENSDORG00000013001	Rbm42	97	95.183	ENSHGLG00000008418	RBM42	94	95.526	Heterocephalus_glaber_female
ENSDORG00000013001	Rbm42	97	95.183	ENSHGLG00100018667	RBM42	94	95.526	Heterocephalus_glaber_male
ENSDORG00000013001	Rbm42	100	97.124	ENSSTOG00000013050	RBM42	100	97.124	Ictidomys_tridecemlineatus
ENSDORG00000013001	Rbm42	100	96.882	ENSJJAG00000010421	Rbm42	100	96.882	Jaculus_jaculus
ENSDORG00000013001	Rbm42	97	92.505	ENSLAFG00000014993	RBM42	94	90.869	Loxodonta_africana
ENSDORG00000013001	Rbm42	99	96.639	ENSMFAG00000002758	RBM42	97	100.000	Macaca_fascicularis
ENSDORG00000013001	Rbm42	99	96.637	ENSMMUG00000018954	RBM42	97	100.000	Macaca_mulatta
ENSDORG00000013001	Rbm42	100	95.816	ENSMNEG00000030009	RBM42	97	100.000	Macaca_nemestrina
ENSDORG00000013001	Rbm42	99	96.639	ENSMLEG00000036119	RBM42	97	100.000	Mandrillus_leucophaeus
ENSDORG00000013001	Rbm42	99	97.484	ENSMICG00000009880	RBM42	100	97.484	Microcebus_murinus
ENSDORG00000013001	Rbm42	100	96.882	ENSMOCG00000000405	Rbm42	100	96.882	Microtus_ochrogaster
ENSDORG00000013001	Rbm42	99	97.321	MGP_CAROLIEiJ_G0029536	Rbm42	99	97.321	Mus_caroli
ENSDORG00000013001	Rbm42	99	97.321	ENSMUSG00000036733	Rbm42	99	97.321	Mus_musculus
ENSDORG00000013001	Rbm42	99	97.545	MGP_PahariEiJ_G0012770	Rbm42	99	97.545	Mus_pahari
ENSDORG00000013001	Rbm42	99	97.321	MGP_SPRETEiJ_G0030632	Rbm42	99	97.321	Mus_spretus
ENSDORG00000013001	Rbm42	99	97.098	ENSMPUG00000006288	RBM42	100	97.098	Mustela_putorius_furo
ENSDORG00000013001	Rbm42	99	95.807	ENSMLUG00000011334	RBM42	94	96.444	Myotis_lucifugus
ENSDORG00000013001	Rbm42	100	97.327	ENSNGAG00000019698	Rbm42	100	97.327	Nannospalax_galili
ENSDORG00000013001	Rbm42	70	97.904	ENSNLEG00000011272	-	94	91.061	Nomascus_leucogenys
ENSDORG00000013001	Rbm42	95	82.353	ENSMEUG00000016300	RBM42	94	83.772	Notamacropus_eugenii
ENSDORG00000013001	Rbm42	99	92.872	ENSOPRG00000001229	RBM42	94	91.333	Ochotona_princeps
ENSDORG00000013001	Rbm42	100	96.018	ENSODEG00000013705	RBM42	99	96.018	Octodon_degus
ENSDORG00000013001	Rbm42	99	96.009	ENSOCUG00000003337	RBM42	100	96.009	Oryctolagus_cuniculus
ENSDORG00000013001	Rbm42	99	96.017	ENSOGAG00000004144	RBM42	100	96.017	Otolemur_garnettii
ENSDORG00000013001	Rbm42	97	88.651	ENSOARG00000004926	RBM42	92	91.982	Ovis_aries
ENSDORG00000013001	Rbm42	99	97.098	ENSPPAG00000037315	RBM42	100	97.098	Pan_paniscus
ENSDORG00000013001	Rbm42	99	97.065	ENSPPRG00000016784	RBM42	100	97.065	Panthera_pardus
ENSDORG00000013001	Rbm42	99	96.646	ENSPTIG00000019270	RBM42	97	100.000	Panthera_tigris_altaica
ENSDORG00000013001	Rbm42	99	96.849	ENSPTRG00000010852	RBM42	97	100.000	Pan_troglodytes
ENSDORG00000013001	Rbm42	99	96.624	ENSPANG00000017032	RBM42	97	100.000	Papio_anubis
ENSDORG00000013001	Rbm42	100	97.550	ENSPEMG00000012065	Rbm42	100	97.550	Peromyscus_maniculatus_bairdii
ENSDORG00000013001	Rbm42	99	95.670	ENSPPYG00000009871	RBM42	100	95.670	Pongo_abelii
ENSDORG00000013001	Rbm42	88	95.738	ENSPCAG00000013053	RBM42	87	92.771	Procavia_capensis
ENSDORG00000013001	Rbm42	70	98.198	ENSPCOG00000020672	RBM42	81	98.198	Propithecus_coquereli
ENSDORG00000013001	Rbm42	99	97.484	ENSPCOG00000026433	-	100	97.484	Propithecus_coquereli
ENSDORG00000013001	Rbm42	99	96.436	ENSPVAG00000012815	RBM42	100	96.436	Pteropus_vampyrus
ENSDORG00000013001	Rbm42	99	97.545	ENSRNOG00000024278	Rbm42	99	97.545	Rattus_norvegicus
ENSDORG00000013001	Rbm42	99	96.639	ENSRBIG00000007566	RBM42	97	100.000	Rhinopithecus_bieti
ENSDORG00000013001	Rbm42	99	97.098	ENSRROG00000042313	RBM42	100	97.098	Rhinopithecus_roxellana
ENSDORG00000013001	Rbm42	85	98.522	ENSSBOG00000030666	RBM42	100	98.522	Saimiri_boliviensis_boliviensis
ENSDORG00000013001	Rbm42	99	86.667	ENSSARG00000010724	RBM42	100	86.667	Sorex_araneus
ENSDORG00000013001	Rbm42	99	97.098	ENSSSCG00000002905	RBM42	100	97.098	Sus_scrofa
ENSDORG00000013001	Rbm42	99	97.098	ENSUAMG00000020711	RBM42	100	97.098	Ursus_americanus
ENSDORG00000013001	Rbm42	99	97.065	ENSUMAG00000020223	RBM42	100	97.065	Ursus_maritimus
ENSDORG00000013001	Rbm42	99	96.875	ENSVVUG00000015117	RBM42	100	96.875	Vulpes_vulpes