EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSDORG00000013558 (Gene tree)
Gene ID: -
Gene Symbol: Fam172a
Alias: 1110033M05Rik|2610318O14Rik|53-E6|9430037D06Rik|pEN87
Full Name: family with sequence similarity 172 member A
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Minus strand
Length: 223233 bases
Position: chrKN672405.1:1452970-1676202
Accession: 105989840
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000012752	Arb2	PF09757.9	6.7e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000013558	-	921	XM_013022086	ENSDORP00000012752	306 (aa)	XP_012877540	UPI000BAD1C10

Gene Model

Click here to download ENSDORG00000013558's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000013558's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000013558	Fam172a	97	92.459	ENSG00000113391	FAM172A	100	92.459	Homo_sapiens
ENSDORG00000013558	Fam172a	61	40.526	ENSAPLG00000011555	-	77	40.526	Anas_platyrhynchos
ENSDORG00000013558	Fam172a	88	87.778	ENSAPLG00000004055	FAM172A	65	87.778	Anas_platyrhynchos
ENSDORG00000013558	Fam172a	89	87.454	ENSACAG00000013305	FAM172A	70	87.454	Anolis_carolinensis
ENSDORG00000013558	Fam172a	94	90.604	ENSANAG00000035869	FAM172A	98	86.916	Aotus_nancymaae
ENSDORG00000013558	Fam172a	88	96.667	ENSBTAG00000050195	FAM172A	65	96.667	Bos_taurus
ENSDORG00000013558	Fam172a	88	97.407	ENSCJAG00000010444	FAM172A	65	97.407	Callithrix_jacchus
ENSDORG00000013558	Fam172a	88	97.778	ENSCAFG00000008064	FAM172A	73	97.778	Canis_familiaris
ENSDORG00000013558	Fam172a	88	97.778	ENSCAFG00020006210	FAM172A	97	95.588	Canis_lupus_dingo
ENSDORG00000013558	Fam172a	88	96.667	ENSCHIG00000008440	FAM172A	65	96.667	Capra_hircus
ENSDORG00000013558	Fam172a	87	97.368	ENSTSYG00000006286	FAM172A	85	97.368	Carlito_syrichta
ENSDORG00000013558	Fam172a	55	89.908	ENSCAPG00000014103	-	69	89.908	Cavia_aperea
ENSDORG00000013558	Fam172a	95	95.862	ENSCCAG00000023116	FAM172A	99	95.862	Cebus_capucinus
ENSDORG00000013558	Fam172a	88	95.167	ENSCLAG00000005472	FAM172A	74	93.548	Chinchilla_lanigera
ENSDORG00000013558	Fam172a	89	44.689	ENSCPBG00000004402	-	69	44.689	Chrysemys_picta_bellii
ENSDORG00000013558	Fam172a	95	96.207	ENSCANG00000040412	FAM172A	99	96.207	Colobus_angolensis_palliatus
ENSDORG00000013558	Fam172a	88	97.407	ENSDNOG00000004689	FAM172A	65	97.407	Dasypus_novemcinctus
ENSDORG00000013558	Fam172a	89	40.074	ENSEBUG00000016097	-	50	40.074	Eptatretus_burgeri
ENSDORG00000013558	Fam172a	89	94.834	ENSECAG00000018274	FAM172A	73	93.796	Equus_caballus
ENSDORG00000013558	Fam172a	88	95.556	ENSEEUG00000002887	FAM172A	65	95.556	Erinaceus_europaeus
ENSDORG00000013558	Fam172a	88	67.778	ENSELUG00000017647	fam172a	64	67.778	Esox_lucius
ENSDORG00000013558	Fam172a	88	97.037	ENSFCAG00000025443	FAM172A	65	97.037	Felis_catus
ENSDORG00000013558	Fam172a	89	44.322	ENSFALG00000006501	-	74	44.322	Ficedula_albicollis
ENSDORG00000013558	Fam172a	89	86.397	ENSFALG00000009072	FAM172A	73	86.667	Ficedula_albicollis
ENSDORG00000013558	Fam172a	88	88.519	ENSGALG00000014661	FAM172A	65	88.519	Gallus_gallus
ENSDORG00000013558	Fam172a	89	45.421	ENSGAGG00000022828	-	70	45.421	Gopherus_agassizii
ENSDORG00000013558	Fam172a	88	90.741	ENSGAGG00000003839	FAM172A	65	90.741	Gopherus_agassizii
ENSDORG00000013558	Fam172a	95	95.172	ENSGGOG00000010296	FAM172A	99	95.172	Gorilla_gorilla
ENSDORG00000013558	Fam172a	88	95.185	ENSHGLG00000011178	FAM172A	68	95.604	Heterocephalus_glaber_female
ENSDORG00000013558	Fam172a	88	95.167	ENSHGLG00100013340	FAM172A	79	96.111	Heterocephalus_glaber_male
ENSDORG00000013558	Fam172a	88	97.037	ENSSTOG00000009918	FAM172A	65	97.037	Ictidomys_tridecemlineatus
ENSDORG00000013558	Fam172a	88	48.339	ENSLACG00000001532	si:ch73-41e3.7	71	48.339	Latimeria_chalumnae
ENSDORG00000013558	Fam172a	88	74.074	ENSLOCG00000001629	fam172a	65	75.185	Lepisosteus_oculatus
ENSDORG00000013558	Fam172a	95	95.517	ENSMFAG00000001171	FAM172A	99	95.517	Macaca_fascicularis
ENSDORG00000013558	Fam172a	95	95.517	ENSMNEG00000039938	FAM172A	99	95.517	Macaca_nemestrina
ENSDORG00000013558	Fam172a	94	97.569	ENSMICG00000030403	FAM172A	93	97.569	Microcebus_murinus
ENSDORG00000013558	Fam172a	88	94.815	ENSMOCG00000003613	Fam172a	73	94.815	Microtus_ochrogaster
ENSDORG00000013558	Fam172a	88	90.370	ENSMODG00000020131	FAM172A	65	90.370	Monodelphis_domestica
ENSDORG00000013558	Fam172a	61	92.473	MGP_PahariEiJ_G0015818	Fam172a	61	92.473	Mus_pahari
ENSDORG00000013558	Fam172a	88	96.667	ENSNGAG00000019570	Fam172a	73	96.667	Nannospalax_galili
ENSDORG00000013558	Fam172a	99	92.763	ENSNLEG00000013903	FAM172A	99	92.763	Nomascus_leucogenys
ENSDORG00000013558	Fam172a	89	89.668	ENSOANG00000011068	FAM172A	73	89.668	Ornithorhynchus_anatinus
ENSDORG00000013558	Fam172a	88	96.667	ENSOCUG00000007299	FAM172A	64	96.667	Oryctolagus_cuniculus
ENSDORG00000013558	Fam172a	88	95.556	ENSOGAG00000015189	FAM172A	65	95.556	Otolemur_garnettii
ENSDORG00000013558	Fam172a	88	96.654	ENSOARG00000016711	FAM172A	61	96.654	Ovis_aries
ENSDORG00000013558	Fam172a	95	95.517	ENSPPAG00000030542	FAM172A	99	95.517	Pan_paniscus
ENSDORG00000013558	Fam172a	88	97.037	ENSPPRG00000006653	FAM172A	65	97.037	Panthera_pardus
ENSDORG00000013558	Fam172a	88	97.037	ENSPTIG00000012681	FAM172A	65	97.037	Panthera_tigris_altaica
ENSDORG00000013558	Fam172a	95	95.517	ENSPTRG00000017074	FAM172A	99	95.517	Pan_troglodytes
ENSDORG00000013558	Fam172a	95	95.517	ENSPANG00000011687	FAM172A	99	95.517	Papio_anubis
ENSDORG00000013558	Fam172a	92	69.751	ENSPKIG00000012314	fam172a	73	69.965	Paramormyrops_kingsleyae
ENSDORG00000013558	Fam172a	88	94.815	ENSPEMG00000009604	-	67	93.011	Peromyscus_maniculatus_bairdii
ENSDORG00000013558	Fam172a	88	90.370	ENSPCIG00000028612	FAM172A	65	90.370	Phascolarctos_cinereus
ENSDORG00000013558	Fam172a	60	97.814	ENSPCOG00000024072	FAM172A	74	97.814	Propithecus_coquereli
ENSDORG00000013558	Fam172a	89	94.834	ENSRNOG00000013844	Fam172a	100	94.834	Rattus_norvegicus
ENSDORG00000013558	Fam172a	58	93.258	ENSRBIG00000028680	-	79	93.258	Rhinopithecus_bieti
ENSDORG00000013558	Fam172a	95	96.207	ENSRROG00000023807	FAM172A	99	96.207	Rhinopithecus_roxellana
ENSDORG00000013558	Fam172a	90	95.307	ENSSBOG00000019860	FAM172A	70	95.307	Saimiri_boliviensis_boliviensis
ENSDORG00000013558	Fam172a	88	89.630	ENSSHAG00000013743	FAM172A	65	89.630	Sarcophilus_harrisii
ENSDORG00000013558	Fam172a	88	89.630	ENSSPUG00000008161	FAM172A	65	89.630	Sphenodon_punctatus
ENSDORG00000013558	Fam172a	88	97.407	ENSSSCG00000027608	FAM172A	88	85.276	Sus_scrofa
ENSDORG00000013558	Fam172a	88	86.296	ENSTGUG00000000715	FAM172A	71	86.296	Taeniopygia_guttata
ENSDORG00000013558	Fam172a	89	45.818	ENSTGUG00000013623	-	82	45.818	Taeniopygia_guttata
ENSDORG00000013558	Fam172a	80	48.400	ENSTNIG00000009902	fam172a	75	51.190	Tetraodon_nigroviridis
ENSDORG00000013558	Fam172a	88	97.037	ENSTTRG00000001521	FAM172A	65	97.037	Tursiops_truncatus
ENSDORG00000013558	Fam172a	92	94.366	ENSUMAG00000005442	FAM172A	73	97.059	Ursus_maritimus
ENSDORG00000013558	Fam172a	88	97.778	ENSVVUG00000022112	FAM172A	71	97.778	Vulpes_vulpes
ENSDORG00000013558	Fam172a	89	44.727	ENSXETG00000033027	-	70	44.727	Xenopus_tropicalis
ENSDORG00000013558	Fam172a	88	80.443	ENSXETG00000011592	fam172a	64	80.443	Xenopus_tropicalis