EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSDORG00000013709 (Gene tree)
Gene ID: 105985878
Gene Symbol: Cpsf2
Alias: -
Full Name: cleavage and polyadenylation specific factor 2
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Minus strand
Length: 31889 bases
Position: chrKN672348.1:9637104-9668992
Accession: 105985878
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000012888	Beta-Casp	PF10996.8	7.6e-21	1	1
ENSDORP00000012888	Lactamase_B	PF00753.27	5.3e-06	1	1
ENSDORP00000012888	RMMBL	PF07521.12	9.4e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000013708	-	3496	XM_013016600	ENSDORP00000012888	782 (aa)	XP_012872054	A0A1S3F7M6

Gene Model

Click here to download ENSDORG00000013709's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000013709's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000013709	Cpsf2	100	99.361	ENSG00000165934	CPSF2	100	99.361	Homo_sapiens
ENSDORG00000013709	Cpsf2	100	85.932	ENSAPOG00000001242	cpsf2	100	85.932	Acanthochromis_polyacanthus
ENSDORG00000013709	Cpsf2	100	86.329	ENSACIG00000009331	cpsf2	100	86.329	Amphilophus_citrinellus
ENSDORG00000013709	Cpsf2	100	86.058	ENSAOCG00000014095	cpsf2	100	86.058	Amphiprion_ocellaris
ENSDORG00000013709	Cpsf2	100	86.058	ENSAPEG00000009158	cpsf2	100	86.058	Amphiprion_percula
ENSDORG00000013709	Cpsf2	96	86.316	ENSATEG00000017644	cpsf2	100	84.641	Anabas_testudineus
ENSDORG00000013709	Cpsf2	100	95.796	ENSAPLG00000006330	CPSF2	100	95.796	Anas_platyrhynchos
ENSDORG00000013709	Cpsf2	100	94.891	ENSACAG00000009245	CPSF2	100	94.891	Anolis_carolinensis
ENSDORG00000013709	Cpsf2	100	99.361	ENSANAG00000022915	CPSF2	100	99.361	Aotus_nancymaae
ENSDORG00000013709	Cpsf2	100	85.769	ENSAMXG00000018696	cpsf2	100	85.769	Astyanax_mexicanus
ENSDORG00000013709	Cpsf2	100	99.361	ENSBTAG00000010227	CPSF2	100	99.361	Bos_taurus
ENSDORG00000013709	Cpsf2	100	41.452	WBGene00017313	cpsf-2	100	40.914	Caenorhabditis_elegans
ENSDORG00000013709	Cpsf2	100	99.361	ENSCJAG00000018069	CPSF2	100	99.361	Callithrix_jacchus
ENSDORG00000013709	Cpsf2	100	99.488	ENSCAFG00000010909	CPSF2	100	99.488	Canis_familiaris
ENSDORG00000013709	Cpsf2	100	99.488	ENSCAFG00020020670	CPSF2	100	99.488	Canis_lupus_dingo
ENSDORG00000013709	Cpsf2	100	99.361	ENSCHIG00000023848	CPSF2	100	99.361	Capra_hircus
ENSDORG00000013709	Cpsf2	100	98.465	ENSTSYG00000009036	CPSF2	100	98.465	Carlito_syrichta
ENSDORG00000013709	Cpsf2	100	99.616	ENSCPOG00000010899	CPSF2	100	99.616	Cavia_porcellus
ENSDORG00000013709	Cpsf2	100	99.361	ENSCCAG00000028088	CPSF2	100	99.361	Cebus_capucinus
ENSDORG00000013709	Cpsf2	100	99.488	ENSCATG00000030132	CPSF2	100	99.488	Cercocebus_atys
ENSDORG00000013709	Cpsf2	100	99.488	ENSCLAG00000012404	CPSF2	100	99.488	Chinchilla_lanigera
ENSDORG00000013709	Cpsf2	100	99.488	ENSCSAG00000011300	CPSF2	100	99.488	Chlorocebus_sabaeus
ENSDORG00000013709	Cpsf2	100	92.327	ENSCHOG00000012904	CPSF2	100	92.327	Choloepus_hoffmanni
ENSDORG00000013709	Cpsf2	100	96.169	ENSCPBG00000008766	CPSF2	97	96.169	Chrysemys_picta_bellii
ENSDORG00000013709	Cpsf2	100	54.421	ENSCING00000007881	-	100	54.047	Ciona_intestinalis
ENSDORG00000013709	Cpsf2	94	99.454	ENSCANG00000041651	CPSF2	100	99.454	Colobus_angolensis_palliatus
ENSDORG00000013709	Cpsf2	100	98.593	ENSCGRG00001006901	Cpsf2	100	98.593	Cricetulus_griseus_chok1gshd
ENSDORG00000013709	Cpsf2	100	98.593	ENSCGRG00000012416	Cpsf2	100	98.593	Cricetulus_griseus_crigri
ENSDORG00000013709	Cpsf2	100	83.904	ENSCSEG00000004116	cpsf2	100	83.904	Cynoglossus_semilaevis
ENSDORG00000013709	Cpsf2	100	85.298	ENSCVAG00000000095	cpsf2	100	85.425	Cyprinodon_variegatus
ENSDORG00000013709	Cpsf2	100	85.696	ENSDARG00000028971	cpsf2	100	85.696	Danio_rerio
ENSDORG00000013709	Cpsf2	100	99.361	ENSDNOG00000042757	CPSF2	100	99.361	Dasypus_novemcinctus
ENSDORG00000013709	Cpsf2	100	53.798	FBgn0027873	Cpsf100	100	53.558	Drosophila_melanogaster
ENSDORG00000013709	Cpsf2	100	90.166	ENSETEG00000012123	CPSF2	100	90.166	Echinops_telfairi
ENSDORG00000013709	Cpsf2	52	76.471	ENSEBUG00000012098	cpsf2	93	76.471	Eptatretus_burgeri
ENSDORG00000013709	Cpsf2	91	97.270	ENSEASG00005021193	CPSF2	100	97.270	Equus_asinus_asinus
ENSDORG00000013709	Cpsf2	100	99.616	ENSECAG00000023935	CPSF2	100	99.616	Equus_caballus
ENSDORG00000013709	Cpsf2	100	84.065	ENSELUG00000008442	cpsf2	100	84.065	Esox_lucius
ENSDORG00000013709	Cpsf2	100	99.744	ENSFCAG00000007886	CPSF2	100	99.744	Felis_catus
ENSDORG00000013709	Cpsf2	100	96.041	ENSFALG00000002412	CPSF2	100	96.041	Ficedula_albicollis
ENSDORG00000013709	Cpsf2	100	99.488	ENSFDAG00000006327	CPSF2	100	99.488	Fukomys_damarensis
ENSDORG00000013709	Cpsf2	96	84.575	ENSFHEG00000015465	cpsf2	98	84.837	Fundulus_heteroclitus
ENSDORG00000013709	Cpsf2	100	83.586	ENSGMOG00000008761	cpsf2	100	83.586	Gadus_morhua
ENSDORG00000013709	Cpsf2	100	95.275	ENSGALG00000010783	CPSF2	100	95.785	Gallus_gallus
ENSDORG00000013709	Cpsf2	100	85.551	ENSGAFG00000001407	cpsf2	100	85.551	Gambusia_affinis
ENSDORG00000013709	Cpsf2	100	84.664	ENSGACG00000008418	cpsf2	100	84.664	Gasterosteus_aculeatus
ENSDORG00000013709	Cpsf2	100	96.296	ENSGAGG00000008287	CPSF2	100	96.296	Gopherus_agassizii
ENSDORG00000013709	Cpsf2	100	99.361	ENSGGOG00000011799	CPSF2	100	99.361	Gorilla_gorilla
ENSDORG00000013709	Cpsf2	100	85.298	ENSHBUG00000023466	cpsf2	100	85.298	Haplochromis_burtoni
ENSDORG00000013709	Cpsf2	100	99.361	ENSHGLG00000018311	CPSF2	100	99.361	Heterocephalus_glaber_female
ENSDORG00000013709	Cpsf2	100	99.361	ENSHGLG00100016460	CPSF2	100	99.361	Heterocephalus_glaber_male
ENSDORG00000013709	Cpsf2	100	84.664	ENSHCOG00000019527	cpsf2	98	84.664	Hippocampus_comes
ENSDORG00000013709	Cpsf2	100	85.769	ENSIPUG00000020857	cpsf2	100	85.769	Ictalurus_punctatus
ENSDORG00000013709	Cpsf2	100	99.488	ENSSTOG00000009528	CPSF2	100	99.488	Ictidomys_tridecemlineatus
ENSDORG00000013709	Cpsf2	100	99.105	ENSJJAG00000017925	Cpsf2	100	99.105	Jaculus_jaculus
ENSDORG00000013709	Cpsf2	100	84.791	ENSKMAG00000019429	cpsf2	100	84.791	Kryptolebias_marmoratus
ENSDORG00000013709	Cpsf2	95	84.203	ENSLBEG00000011585	cpsf2	100	84.358	Labrus_bergylta
ENSDORG00000013709	Cpsf2	100	89.911	ENSLACG00000019024	CPSF2	100	90.166	Latimeria_chalumnae
ENSDORG00000013709	Cpsf2	100	87.326	ENSLOCG00000014102	cpsf2	100	87.326	Lepisosteus_oculatus
ENSDORG00000013709	Cpsf2	100	99.107	ENSLAFG00000004891	CPSF2	100	99.107	Loxodonta_africana
ENSDORG00000013709	Cpsf2	100	99.488	ENSMFAG00000041212	CPSF2	100	99.488	Macaca_fascicularis
ENSDORG00000013709	Cpsf2	100	99.488	ENSMMUG00000000699	CPSF2	100	99.488	Macaca_mulatta
ENSDORG00000013709	Cpsf2	100	99.488	ENSMNEG00000031584	CPSF2	100	99.488	Macaca_nemestrina
ENSDORG00000013709	Cpsf2	100	99.488	ENSMLEG00000029394	CPSF2	100	99.488	Mandrillus_leucophaeus
ENSDORG00000013709	Cpsf2	100	85.932	ENSMAMG00000004235	cpsf2	100	85.932	Mastacembelus_armatus
ENSDORG00000013709	Cpsf2	100	85.425	ENSMZEG00005001769	cpsf2	100	85.425	Maylandia_zebra
ENSDORG00000013709	Cpsf2	100	95.281	ENSMGAG00000013122	CPSF2	100	95.791	Meleagris_gallopavo
ENSDORG00000013709	Cpsf2	100	98.593	ENSMAUG00000015160	Cpsf2	100	98.593	Mesocricetus_auratus
ENSDORG00000013709	Cpsf2	100	99.361	ENSMICG00000016441	CPSF2	100	99.361	Microcebus_murinus
ENSDORG00000013709	Cpsf2	100	98.593	ENSMOCG00000015372	Cpsf2	100	98.593	Microtus_ochrogaster
ENSDORG00000013709	Cpsf2	100	81.242	ENSMMOG00000015590	cpsf2	100	81.242	Mola_mola
ENSDORG00000013709	Cpsf2	100	98.721	ENSMODG00000002042	CPSF2	100	98.721	Monodelphis_domestica
ENSDORG00000013709	Cpsf2	100	82.763	ENSMALG00000022275	cpsf2	100	82.763	Monopterus_albus
ENSDORG00000013709	Cpsf2	100	98.210	ENSMUSG00000041781	Cpsf2	100	98.210	Mus_musculus
ENSDORG00000013709	Cpsf2	100	98.338	MGP_PahariEiJ_G0029791	Cpsf2	100	98.338	Mus_pahari
ENSDORG00000013709	Cpsf2	100	98.210	MGP_SPRETEiJ_G0018877	Cpsf2	100	98.210	Mus_spretus
ENSDORG00000013709	Cpsf2	100	99.488	ENSMPUG00000007617	CPSF2	98	99.488	Mustela_putorius_furo
ENSDORG00000013709	Cpsf2	100	98.721	ENSMLUG00000005570	CPSF2	100	98.721	Myotis_lucifugus
ENSDORG00000013709	Cpsf2	100	99.105	ENSNGAG00000020312	Cpsf2	100	99.105	Nannospalax_galili
ENSDORG00000013709	Cpsf2	100	85.805	ENSNBRG00000022402	cpsf2	100	85.805	Neolamprologus_brichardi
ENSDORG00000013709	Cpsf2	100	98.465	ENSNLEG00000017132	CPSF2	100	98.465	Nomascus_leucogenys
ENSDORG00000013709	Cpsf2	91	99.353	ENSMEUG00000008138	CPSF2	91	99.353	Notamacropus_eugenii
ENSDORG00000013709	Cpsf2	94	91.667	ENSOPRG00000008484	-	100	91.667	Ochotona_princeps
ENSDORG00000013709	Cpsf2	100	99.233	ENSODEG00000008682	CPSF2	100	99.233	Octodon_degus
ENSDORG00000013709	Cpsf2	100	86.185	ENSONIG00000005901	cpsf2	100	86.185	Oreochromis_niloticus
ENSDORG00000013709	Cpsf2	100	98.593	ENSOANG00000003822	CPSF2	100	98.593	Ornithorhynchus_anatinus
ENSDORG00000013709	Cpsf2	100	99.105	ENSOCUG00000005713	CPSF2	100	99.105	Oryctolagus_cuniculus
ENSDORG00000013709	Cpsf2	100	80.228	ENSORLG00000011628	cpsf2	100	80.228	Oryzias_latipes
ENSDORG00000013709	Cpsf2	100	84.918	ENSORLG00020016980	cpsf2	100	84.918	Oryzias_latipes_hni
ENSDORG00000013709	Cpsf2	100	84.918	ENSORLG00015011910	cpsf2	100	84.918	Oryzias_latipes_hsok
ENSDORG00000013709	Cpsf2	100	84.157	ENSOMEG00000022876	cpsf2	100	84.157	Oryzias_melastigma
ENSDORG00000013709	Cpsf2	100	96.301	ENSOARG00000012889	CPSF2	100	96.301	Ovis_aries
ENSDORG00000013709	Cpsf2	100	99.361	ENSPPAG00000039666	CPSF2	100	99.361	Pan_paniscus
ENSDORG00000013709	Cpsf2	99	99.744	ENSPPRG00000010869	CPSF2	100	99.744	Panthera_pardus
ENSDORG00000013709	Cpsf2	100	99.744	ENSPTIG00000021202	CPSF2	100	99.744	Panthera_tigris_altaica
ENSDORG00000013709	Cpsf2	100	99.361	ENSPTRG00000006651	CPSF2	100	99.361	Pan_troglodytes
ENSDORG00000013709	Cpsf2	100	99.488	ENSPANG00000017417	CPSF2	100	99.488	Papio_anubis
ENSDORG00000013709	Cpsf2	100	82.338	ENSPKIG00000021453	cpsf2	100	82.338	Paramormyrops_kingsleyae
ENSDORG00000013709	Cpsf2	100	95.785	ENSPSIG00000006289	CPSF2	100	95.785	Pelodiscus_sinensis
ENSDORG00000013709	Cpsf2	76	79.900	ENSPMGG00000002511	cpsf2	100	80.066	Periophthalmus_magnuspinnatus
ENSDORG00000013709	Cpsf2	100	98.849	ENSPEMG00000007917	Cpsf2	100	98.849	Peromyscus_maniculatus_bairdii
ENSDORG00000013709	Cpsf2	100	74.336	ENSPMAG00000006205	cpsf2	100	74.336	Petromyzon_marinus
ENSDORG00000013709	Cpsf2	100	98.721	ENSPCIG00000011393	CPSF2	100	98.721	Phascolarctos_cinereus
ENSDORG00000013709	Cpsf2	100	85.425	ENSPFOG00000018648	cpsf2	100	85.425	Poecilia_formosa
ENSDORG00000013709	Cpsf2	100	85.425	ENSPLAG00000019199	cpsf2	99	85.425	Poecilia_latipinna
ENSDORG00000013709	Cpsf2	96	85.789	ENSPMEG00000012100	cpsf2	100	85.160	Poecilia_mexicana
ENSDORG00000013709	Cpsf2	100	85.298	ENSPREG00000008960	cpsf2	100	85.298	Poecilia_reticulata
ENSDORG00000013709	Cpsf2	63	99.194	ENSPPYG00000029685	-	100	99.194	Pongo_abelii
ENSDORG00000013709	Cpsf2	100	98.977	ENSPCAG00000012477	CPSF2	100	98.977	Procavia_capensis
ENSDORG00000013709	Cpsf2	100	99.361	ENSPCOG00000026387	CPSF2	100	99.361	Propithecus_coquereli
ENSDORG00000013709	Cpsf2	65	100.000	ENSPVAG00000004223	CPSF2	65	100.000	Pteropus_vampyrus
ENSDORG00000013709	Cpsf2	100	85.443	ENSPNYG00000023356	cpsf2	100	85.443	Pundamilia_nyererei
ENSDORG00000013709	Cpsf2	100	86.912	ENSPNAG00000001849	cpsf2	100	86.912	Pygocentrus_nattereri
ENSDORG00000013709	Cpsf2	100	98.721	ENSRNOG00000005733	Cpsf2	100	98.721	Rattus_norvegicus
ENSDORG00000013709	Cpsf2	100	99.488	ENSRBIG00000044792	CPSF2	100	99.488	Rhinopithecus_bieti
ENSDORG00000013709	Cpsf2	100	99.488	ENSRROG00000034875	CPSF2	100	99.488	Rhinopithecus_roxellana
ENSDORG00000013709	Cpsf2	100	99.361	ENSSBOG00000024571	CPSF2	100	99.361	Saimiri_boliviensis_boliviensis
ENSDORG00000013709	Cpsf2	100	98.849	ENSSHAG00000010458	CPSF2	100	98.849	Sarcophilus_harrisii
ENSDORG00000013709	Cpsf2	100	87.294	ENSSFOG00015002117	cpsf2	100	87.294	Scleropages_formosus
ENSDORG00000013709	Cpsf2	100	84.157	ENSSMAG00000002001	cpsf2	100	84.157	Scophthalmus_maximus
ENSDORG00000013709	Cpsf2	100	86.312	ENSSDUG00000004084	cpsf2	100	86.312	Seriola_dumerili
ENSDORG00000013709	Cpsf2	100	85.805	ENSSLDG00000024330	cpsf2	100	85.805	Seriola_lalandi_dorsalis
ENSDORG00000013709	Cpsf2	58	100.000	ENSSARG00000009784	-	63	100.000	Sorex_araneus
ENSDORG00000013709	Cpsf2	100	95.530	ENSSPUG00000013485	CPSF2	100	95.530	Sphenodon_punctatus
ENSDORG00000013709	Cpsf2	100	85.298	ENSSPAG00000013284	cpsf2	100	85.298	Stegastes_partitus
ENSDORG00000013709	Cpsf2	100	99.361	ENSSSCG00000002447	CPSF2	100	99.361	Sus_scrofa
ENSDORG00000013709	Cpsf2	100	96.169	ENSTGUG00000012571	-	100	96.169	Taeniopygia_guttata
ENSDORG00000013709	Cpsf2	100	84.411	ENSTRUG00000003742	cpsf2	100	84.411	Takifugu_rubripes
ENSDORG00000013709	Cpsf2	100	83.312	ENSTNIG00000012228	cpsf2	100	84.071	Tetraodon_nigroviridis
ENSDORG00000013709	Cpsf2	91	100.000	ENSTBEG00000004530	CPSF2	94	100.000	Tupaia_belangeri
ENSDORG00000013709	Cpsf2	88	100.000	ENSTTRG00000008697	CPSF2	88	100.000	Tursiops_truncatus
ENSDORG00000013709	Cpsf2	100	99.616	ENSUAMG00000028071	CPSF2	100	99.616	Ursus_americanus
ENSDORG00000013709	Cpsf2	100	99.616	ENSUMAG00000005029	CPSF2	100	99.616	Ursus_maritimus
ENSDORG00000013709	Cpsf2	99	99.488	ENSVPAG00000003503	CPSF2	100	99.488	Vicugna_pacos
ENSDORG00000013709	Cpsf2	100	99.488	ENSVVUG00000024642	CPSF2	100	99.488	Vulpes_vulpes
ENSDORG00000013709	Cpsf2	100	91.826	ENSXETG00000010289	cpsf2	100	91.826	Xenopus_tropicalis
ENSDORG00000013709	Cpsf2	100	85.805	ENSXCOG00000001764	cpsf2	100	85.805	Xiphophorus_couchianus
ENSDORG00000013709	Cpsf2	100	85.932	ENSXMAG00000017048	cpsf2	100	85.932	Xiphophorus_maculatus