EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDORG00000013903 (Gene tree)
Gene ID: 105989824
Gene Symbol: Poc1b
Alias: -
Full Name: POC1 centriolar protein B
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Minus strand
Length: 78633 bases
Position: chrKN672349.1:24627816-24706448
Accession: 105989824
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000026628	eIF2A	PF08662.11	9.1e-13	1	1
ENSDORP00000020917	eIF2A	PF08662.11	1.2e-12	1	1
ENSDORP00000013068	eIF2A	PF08662.11	2.1e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000033084	-	2950	XM_013022049	ENSDORP00000020917	478 (aa)	XP_012877503	A0A1S3FLP8
ENSDORT00000013903	-	1605	-	ENSDORP00000013068	534 (aa)	-	UPI000BACF96F
ENSDORT00000024981	-	2869	XM_013022060	ENSDORP00000026628	451 (aa)	XP_012877514	A0A1S3FNB7

Gene Model

Click here to download ENSDORG00000013903's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000013903's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDORG00000013903	Poc1b	69	30.802	ENSDORG00000006906	Prpf19	54	30.802
ENSDORG00000013903	Poc1b	71	30.872	ENSDORG00000003169	Wdr5b	91	30.872
ENSDORG00000013903	Poc1b	78	31.683	ENSDORG00000011031	Wdr3	65	31.683
ENSDORG00000013903	Poc1b	63	31.250	ENSDORG00000005973	Wdr61	99	31.250
ENSDORG00000013903	Poc1b	66	32.203	ENSDORG00000026275	Prpf4	57	32.203
ENSDORG00000013903	Poc1b	67	33.083	ENSDORG00000015010	Wdr5	91	33.083

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000013903	Poc1b	100	86.639	ENSG00000139323	POC1B	100	90.110	Homo_sapiens
ENSDORG00000013903	Poc1b	98	85.906	ENSAMEG00000001812	POC1B	100	85.906	Ailuropoda_melanoleuca
ENSDORG00000013903	Poc1b	100	86.848	ENSANAG00000023816	POC1B	100	86.848	Aotus_nancymaae
ENSDORG00000013903	Poc1b	99	87.238	ENSBTAG00000000687	POC1B	99	87.315	Bos_taurus
ENSDORG00000013903	Poc1b	100	86.639	ENSCJAG00000019637	POC1B	100	86.639	Callithrix_jacchus
ENSDORG00000013903	Poc1b	99	88.608	ENSCAFG00000006105	POC1B	99	88.608	Canis_familiaris
ENSDORG00000013903	Poc1b	98	88.558	ENSCAFG00020016403	POC1B	100	88.558	Canis_lupus_dingo
ENSDORG00000013903	Poc1b	99	87.526	ENSCHIG00000026402	POC1B	99	87.526	Capra_hircus
ENSDORG00000013903	Poc1b	84	83.663	ENSTSYG00000010732	POC1B	98	82.338	Carlito_syrichta
ENSDORG00000013903	Poc1b	97	72.540	ENSCAPG00000015652	POC1B	100	72.540	Cavia_aperea
ENSDORG00000013903	Poc1b	100	83.925	ENSCPOG00000015525	POC1B	100	83.925	Cavia_porcellus
ENSDORG00000013903	Poc1b	100	87.265	ENSCATG00000036201	POC1B	100	87.265	Cercocebus_atys
ENSDORG00000013903	Poc1b	98	86.966	ENSCLAG00000006831	POC1B	100	86.966	Chinchilla_lanigera
ENSDORG00000013903	Poc1b	100	87.168	ENSCSAG00000003775	POC1B	100	87.168	Chlorocebus_sabaeus
ENSDORG00000013903	Poc1b	99	64.241	ENSCPBG00000000137	POC1B	99	64.033	Chrysemys_picta_bellii
ENSDORG00000013903	Poc1b	100	86.848	ENSCANG00000043354	POC1B	100	86.848	Colobus_angolensis_palliatus
ENSDORG00000013903	Poc1b	98	86.517	ENSDNOG00000011916	POC1B	100	86.517	Dasypus_novemcinctus
ENSDORG00000013903	Poc1b	100	87.891	ENSEASG00005019319	POC1B	100	87.891	Equus_asinus_asinus
ENSDORG00000013903	Poc1b	100	87.683	ENSECAG00000013326	POC1B	100	87.683	Equus_caballus
ENSDORG00000013903	Poc1b	100	86.848	ENSFCAG00000007623	POC1B	100	86.848	Felis_catus
ENSDORG00000013903	Poc1b	97	54.060	ENSFALG00000010636	POC1B	93	54.506	Ficedula_albicollis
ENSDORG00000013903	Poc1b	98	88.090	ENSFDAG00000020160	POC1B	100	88.090	Fukomys_damarensis
ENSDORG00000013903	Poc1b	78	70.739	ENSGAGG00000013124	POC1B	99	69.944	Gopherus_agassizii
ENSDORG00000013903	Poc1b	100	86.726	ENSGGOG00000008572	POC1B	100	86.726	Gorilla_gorilla
ENSDORG00000013903	Poc1b	100	87.265	ENSHGLG00000014556	POC1B	100	88.101	Heterocephalus_glaber_female
ENSDORG00000013903	Poc1b	98	88.278	ENSHGLG00100000295	POC1B	100	88.278	Heterocephalus_glaber_male
ENSDORG00000013903	Poc1b	99	86.577	ENSSTOG00000006306	POC1B	100	86.577	Ictidomys_tridecemlineatus
ENSDORG00000013903	Poc1b	100	86.504	ENSJJAG00000013503	Poc1b	100	86.504	Jaculus_jaculus
ENSDORG00000013903	Poc1b	98	59.958	ENSLOCG00000016379	POC1B	96	59.072	Lepisosteus_oculatus
ENSDORG00000013903	Poc1b	99	87.342	ENSLAFG00000017550	POC1B	100	87.342	Loxodonta_africana
ENSDORG00000013903	Poc1b	100	87.265	ENSMFAG00000043490	POC1B	100	87.265	Macaca_fascicularis
ENSDORG00000013903	Poc1b	100	87.265	ENSMNEG00000040128	POC1B	100	87.265	Macaca_nemestrina
ENSDORG00000013903	Poc1b	100	87.265	ENSMLEG00000031700	POC1B	100	87.265	Mandrillus_leucophaeus
ENSDORG00000013903	Poc1b	100	83.473	ENSMOCG00000015822	Poc1b	100	83.486	Microtus_ochrogaster
ENSDORG00000013903	Poc1b	99	71.068	ENSMODG00000009882	POC1B	99	71.233	Monodelphis_domestica
ENSDORG00000013903	Poc1b	100	81.375	MGP_PahariEiJ_G0031323	Poc1b	100	82.339	Mus_pahari
ENSDORG00000013903	Poc1b	100	86.013	ENSMPUG00000007581	POC1B	100	86.013	Mustela_putorius_furo
ENSDORG00000013903	Poc1b	98	84.529	ENSMLUG00000002893	POC1B	99	84.529	Myotis_lucifugus
ENSDORG00000013903	Poc1b	100	85.177	ENSNGAG00000019321	Poc1b	100	85.177	Nannospalax_galili
ENSDORG00000013903	Poc1b	100	86.726	ENSNLEG00000034847	POC1B	100	86.726	Nomascus_leucogenys
ENSDORG00000013903	Poc1b	99	85.381	ENSODEG00000009236	POC1B	99	85.381	Octodon_degus
ENSDORG00000013903	Poc1b	97	68.506	ENSOANG00000006637	POC1B	99	67.972	Ornithorhynchus_anatinus
ENSDORG00000013903	Poc1b	100	87.891	ENSOCUG00000008219	POC1B	100	87.891	Oryctolagus_cuniculus
ENSDORG00000013903	Poc1b	99	87.448	ENSOARG00000015648	POC1B	99	87.526	Ovis_aries
ENSDORG00000013903	Poc1b	100	86.947	ENSPPAG00000030897	POC1B	100	86.947	Pan_paniscus
ENSDORG00000013903	Poc1b	100	86.848	ENSPPRG00000006168	POC1B	100	86.848	Panthera_pardus
ENSDORG00000013903	Poc1b	98	86.270	ENSPTIG00000019536	POC1B	100	86.270	Panthera_tigris_altaica
ENSDORG00000013903	Poc1b	100	86.947	ENSPTRG00000005284	POC1B	100	86.947	Pan_troglodytes
ENSDORG00000013903	Poc1b	100	87.056	ENSPANG00000015875	POC1B	100	87.056	Papio_anubis
ENSDORG00000013903	Poc1b	97	65.132	ENSPSIG00000004298	POC1B	97	65.132	Pelodiscus_sinensis
ENSDORG00000013903	Poc1b	62	86.585	ENSPCIG00000014731	-	84	86.585	Phascolarctos_cinereus
ENSDORG00000013903	Poc1b	100	87.265	ENSPPYG00000004819	POC1B	100	87.265	Pongo_abelii
ENSDORG00000013903	Poc1b	100	66.388	ENSPCAG00000002158	POC1B	100	66.388	Procavia_capensis
ENSDORG00000013903	Poc1b	100	87.866	ENSPVAG00000011562	POC1B	100	87.866	Pteropus_vampyrus
ENSDORG00000013903	Poc1b	99	57.732	ENSPNAG00000026557	POC1B	97	57.025	Pygocentrus_nattereri
ENSDORG00000013903	Poc1b	100	84.956	ENSRBIG00000001080	POC1B	100	84.956	Rhinopithecus_bieti
ENSDORG00000013903	Poc1b	100	87.056	ENSRROG00000044376	POC1B	100	87.056	Rhinopithecus_roxellana
ENSDORG00000013903	Poc1b	100	87.265	ENSSBOG00000023395	POC1B	100	87.265	Saimiri_boliviensis_boliviensis
ENSDORG00000013903	Poc1b	100	76.200	ENSSARG00000010807	POC1B	100	76.200	Sorex_araneus
ENSDORG00000013903	Poc1b	100	87.474	ENSSSCG00000000920	POC1B	100	87.474	Sus_scrofa
ENSDORG00000013903	Poc1b	98	57.484	ENSTGUG00000008063	POC1B	99	57.484	Taeniopygia_guttata
ENSDORG00000013903	Poc1b	95	84.368	ENSTBEG00000014216	POC1B	100	84.368	Tupaia_belangeri
ENSDORG00000013903	Poc1b	100	85.804	ENSTTRG00000002513	POC1B	100	85.804	Tursiops_truncatus
ENSDORG00000013903	Poc1b	100	86.848	ENSUAMG00000006889	POC1B	100	86.848	Ursus_americanus
ENSDORG00000013903	Poc1b	98	86.728	ENSUMAG00000002434	POC1B	100	87.348	Ursus_maritimus
ENSDORG00000013903	Poc1b	84	85.294	ENSVPAG00000001441	POC1B	84	85.294	Vicugna_pacos
ENSDORG00000013903	Poc1b	74	91.237	ENSVVUG00000011627	-	96	91.237	Vulpes_vulpes
ENSDORG00000013903	Poc1b	98	60.510	ENSXETG00000021865	poc1b	96	66.209	Xenopus_tropicalis