EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDORG00000013916 (Gene tree)
Gene ID: 105987376
Gene Symbol: Sub1
Alias: -
Full Name: SUB1 homolog%2C transcriptional regulator
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Minus strand
Length: 11353 bases
Position: chrKN672387.1:14255144-14266496
Accession: 105987376
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000013078	PC4	PF02229.16	4.3e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000013913	-	709	XM_013018616	ENSDORP00000013078	127 (aa)	XP_012874070	A0A1S3FC32

Gene Model

Click here to download ENSDORG00000013916's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000013916's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDORG00000013916	Sub1	100	85.039	ENSDORG00000026076	-	100	85.039
ENSDORG00000013916	Sub1	100	79.528	ENSDORG00000027485	-	100	79.528

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000013916	Sub1	100	96.850	ENSG00000113387	SUB1	100	96.850	Homo_sapiens
ENSDORG00000013916	Sub1	100	69.291	ENSAPOG00000005917	SUB1	100	65.354	Acanthochromis_polyacanthus
ENSDORG00000013916	Sub1	100	97.638	ENSAMEG00000006238	SUB1	95	97.638	Ailuropoda_melanoleuca
ENSDORG00000013916	Sub1	100	70.866	ENSACIG00000015976	sub1b	100	66.929	Amphilophus_citrinellus
ENSDORG00000013916	Sub1	85	67.593	ENSAOCG00000002323	-	75	70.652	Amphiprion_ocellaris
ENSDORG00000013916	Sub1	91	66.379	ENSAOCG00000007313	-	82	71.569	Amphiprion_ocellaris
ENSDORG00000013916	Sub1	100	70.866	ENSAPEG00000024347	sub1b	100	66.929	Amphiprion_percula
ENSDORG00000013916	Sub1	76	70.833	ENSAPEG00000017151	-	71	70.652	Amphiprion_percula
ENSDORG00000013916	Sub1	51	70.769	ENSAPEG00000014618	-	62	70.769	Amphiprion_percula
ENSDORG00000013916	Sub1	100	72.441	ENSATEG00000010340	sub1b	100	68.504	Anabas_testudineus
ENSDORG00000013916	Sub1	100	79.851	ENSACAG00000007974	SUB1	100	79.851	Anolis_carolinensis
ENSDORG00000013916	Sub1	100	96.850	ENSANAG00000011651	-	100	96.850	Aotus_nancymaae
ENSDORG00000013916	Sub1	100	92.913	ENSANAG00000023392	-	83	92.913	Aotus_nancymaae
ENSDORG00000013916	Sub1	100	72.441	ENSACLG00000016875	sub1b	64	68.504	Astatotilapia_calliptera
ENSDORG00000013916	Sub1	100	75.591	ENSAMXG00000037104	sub1b	100	71.654	Astyanax_mexicanus
ENSDORG00000013916	Sub1	100	96.063	ENSBTAG00000021965	SUB1	100	96.063	Bos_taurus
ENSDORG00000013916	Sub1	80	96.078	ENSCJAG00000018718	SUB1	98	96.078	Callithrix_jacchus
ENSDORG00000013916	Sub1	91	93.913	ENSCAFG00000024488	-	86	93.519	Canis_familiaris
ENSDORG00000013916	Sub1	100	97.638	ENSCAFG00000018879	-	88	97.638	Canis_familiaris
ENSDORG00000013916	Sub1	100	96.850	ENSCAFG00000016713	-	96	96.850	Canis_familiaris
ENSDORG00000013916	Sub1	100	94.531	ENSCAFG00020011479	-	77	94.531	Canis_lupus_dingo
ENSDORG00000013916	Sub1	100	97.638	ENSCAFG00020016840	-	100	97.638	Canis_lupus_dingo
ENSDORG00000013916	Sub1	100	96.850	ENSCHIG00000008460	SUB1	100	96.850	Capra_hircus
ENSDORG00000013916	Sub1	100	89.231	ENSTSYG00000014069	-	93	89.231	Carlito_syrichta
ENSDORG00000013916	Sub1	100	96.850	ENSTSYG00000029948	-	100	96.850	Carlito_syrichta
ENSDORG00000013916	Sub1	100	85.039	ENSTSYG00000035366	-	83	85.039	Carlito_syrichta
ENSDORG00000013916	Sub1	100	96.850	ENSCPOG00000031334	SUB1	100	96.850	Cavia_porcellus
ENSDORG00000013916	Sub1	100	92.913	ENSCCAG00000033751	-	95	92.913	Cebus_capucinus
ENSDORG00000013916	Sub1	100	89.764	ENSCCAG00000017043	-	93	89.764	Cebus_capucinus
ENSDORG00000013916	Sub1	100	96.850	ENSCCAG00000023605	-	100	96.850	Cebus_capucinus
ENSDORG00000013916	Sub1	100	92.126	ENSCCAG00000020604	-	100	92.126	Cebus_capucinus
ENSDORG00000013916	Sub1	100	96.850	ENSCATG00000031199	SUB1	100	96.850	Cercocebus_atys
ENSDORG00000013916	Sub1	100	96.094	ENSCLAG00000007522	SUB1	100	96.094	Chinchilla_lanigera
ENSDORG00000013916	Sub1	100	92.913	ENSCSAG00000019449	-	100	92.913	Chlorocebus_sabaeus
ENSDORG00000013916	Sub1	100	96.850	ENSCSAG00000017172	-	100	96.850	Chlorocebus_sabaeus
ENSDORG00000013916	Sub1	100	88.976	ENSCPBG00000024218	SUB1	79	86.614	Chrysemys_picta_bellii
ENSDORG00000013916	Sub1	100	77.953	ENSCANG00000028665	-	90	77.953	Colobus_angolensis_palliatus
ENSDORG00000013916	Sub1	100	96.850	ENSCANG00000029372	SUB1	100	96.850	Colobus_angolensis_palliatus
ENSDORG00000013916	Sub1	100	93.701	ENSCGRG00001003473	-	100	93.701	Cricetulus_griseus_chok1gshd
ENSDORG00000013916	Sub1	100	79.528	ENSCGRG00001014660	-	100	79.528	Cricetulus_griseus_chok1gshd
ENSDORG00000013916	Sub1	100	77.953	ENSCGRG00001016254	-	100	77.953	Cricetulus_griseus_chok1gshd
ENSDORG00000013916	Sub1	100	81.102	ENSCGRG00000001489	-	100	81.102	Cricetulus_griseus_crigri
ENSDORG00000013916	Sub1	100	79.528	ENSCGRG00000019368	-	100	79.528	Cricetulus_griseus_crigri
ENSDORG00000013916	Sub1	100	93.701	ENSCGRG00000001133	-	100	93.701	Cricetulus_griseus_crigri
ENSDORG00000013916	Sub1	99	76.984	ENSDARG00000053446	sub1a	99	76.190	Danio_rerio
ENSDORG00000013916	Sub1	100	71.654	ENSDARG00000007720	sub1b	100	68.504	Danio_rerio
ENSDORG00000013916	Sub1	100	94.488	ENSDNOG00000040794	-	100	94.488	Dasypus_novemcinctus
ENSDORG00000013916	Sub1	100	92.913	ENSDNOG00000032396	-	100	92.913	Dasypus_novemcinctus
ENSDORG00000013916	Sub1	100	96.850	ENSEASG00005007099	SUB1	100	96.850	Equus_asinus_asinus
ENSDORG00000013916	Sub1	100	96.850	ENSECAG00000012399	SUB1	100	96.850	Equus_caballus
ENSDORG00000013916	Sub1	81	95.146	ENSEEUG00000000436	SUB1	100	95.146	Erinaceus_europaeus
ENSDORG00000013916	Sub1	100	97.638	ENSFCAG00000037288	SUB1	100	97.638	Felis_catus
ENSDORG00000013916	Sub1	100	89.764	ENSFALG00000002143	SUB1	87	89.764	Ficedula_albicollis
ENSDORG00000013916	Sub1	100	96.850	ENSFDAG00000017179	SUB1	100	96.850	Fukomys_damarensis
ENSDORG00000013916	Sub1	100	88.189	ENSGALG00000003248	SUB1	100	88.189	Gallus_gallus
ENSDORG00000013916	Sub1	100	52.756	ENSGALG00000027147	-	100	52.756	Gallus_gallus
ENSDORG00000013916	Sub1	100	85.827	ENSGALG00000034905	-	100	83.465	Gallus_gallus
ENSDORG00000013916	Sub1	100	70.866	ENSGACG00000003912	sub1b	100	66.142	Gasterosteus_aculeatus
ENSDORG00000013916	Sub1	100	88.976	ENSGAGG00000013535	SUB1	100	88.976	Gopherus_agassizii
ENSDORG00000013916	Sub1	100	96.850	ENSGGOG00000040900	SUB1	100	96.850	Gorilla_gorilla
ENSDORG00000013916	Sub1	82	71.154	ENSHBUG00000013953	sub1b	77	71.154	Haplochromis_burtoni
ENSDORG00000013916	Sub1	100	96.850	ENSHGLG00000006749	SUB1	100	96.850	Heterocephalus_glaber_female
ENSDORG00000013916	Sub1	100	96.850	ENSHGLG00100014344	SUB1	100	96.850	Heterocephalus_glaber_male
ENSDORG00000013916	Sub1	100	69.291	ENSHCOG00000001809	sub1b	100	63.780	Hippocampus_comes
ENSDORG00000013916	Sub1	100	73.643	ENSIPUG00000024367	SUB1	100	69.767	Ictalurus_punctatus
ENSDORG00000013916	Sub1	100	70.866	ENSIPUG00000008166	sub1	100	66.929	Ictalurus_punctatus
ENSDORG00000013916	Sub1	100	96.063	ENSSTOG00000019364	SUB1	100	96.063	Ictidomys_tridecemlineatus
ENSDORG00000013916	Sub1	100	89.764	ENSJJAG00000018885	Sub1	100	89.764	Jaculus_jaculus
ENSDORG00000013916	Sub1	99	69.048	ENSLBEG00000010728	sub1b	99	66.667	Labrus_bergylta
ENSDORG00000013916	Sub1	51	90.769	ENSLACG00000001068	SUB1	100	90.769	Latimeria_chalumnae
ENSDORG00000013916	Sub1	100	77.165	ENSLOCG00000006692	sub1b	100	74.016	Lepisosteus_oculatus
ENSDORG00000013916	Sub1	100	95.276	ENSLAFG00000032088	-	100	95.276	Loxodonta_africana
ENSDORG00000013916	Sub1	100	95.276	ENSLAFG00000011006	-	100	95.276	Loxodonta_africana
ENSDORG00000013916	Sub1	100	96.850	ENSMFAG00000040728	SUB1	100	96.850	Macaca_fascicularis
ENSDORG00000013916	Sub1	100	88.189	ENSMFAG00000045643	-	61	88.189	Macaca_fascicularis
ENSDORG00000013916	Sub1	100	96.850	ENSMMUG00000046181	SUB1	100	96.850	Macaca_mulatta
ENSDORG00000013916	Sub1	100	96.850	ENSMNEG00000037046	SUB1	100	96.850	Macaca_nemestrina
ENSDORG00000013916	Sub1	100	96.850	ENSMLEG00000037017	-	100	96.850	Mandrillus_leucophaeus
ENSDORG00000013916	Sub1	100	77.165	ENSMLEG00000043436	-	90	77.165	Mandrillus_leucophaeus
ENSDORG00000013916	Sub1	100	94.488	ENSMLEG00000030509	-	94	94.488	Mandrillus_leucophaeus
ENSDORG00000013916	Sub1	100	70.079	ENSMAMG00000018428	sub1b	100	66.142	Mastacembelus_armatus
ENSDORG00000013916	Sub1	100	70.866	ENSMZEG00005021252	sub1b	100	66.929	Maylandia_zebra
ENSDORG00000013916	Sub1	100	50.394	ENSMGAG00000001200	-	95	50.394	Meleagris_gallopavo
ENSDORG00000013916	Sub1	100	88.189	ENSMGAG00000002906	SUB1	100	88.189	Meleagris_gallopavo
ENSDORG00000013916	Sub1	100	93.701	ENSMAUG00000020232	Sub1	100	93.701	Mesocricetus_auratus
ENSDORG00000013916	Sub1	100	96.850	ENSMICG00000014535	SUB1	100	96.850	Microcebus_murinus
ENSDORG00000013916	Sub1	100	81.102	ENSMOCG00000016424	-	100	81.102	Microtus_ochrogaster
ENSDORG00000013916	Sub1	100	93.701	ENSMOCG00000018930	-	100	93.701	Microtus_ochrogaster
ENSDORG00000013916	Sub1	100	83.571	ENSMODG00000020410	SUB1	100	83.571	Monodelphis_domestica
ENSDORG00000013916	Sub1	100	70.866	ENSMALG00000007163	sub1b	81	72.441	Monopterus_albus
ENSDORG00000013916	Sub1	100	93.701	MGP_CAROLIEiJ_G0019676	Sub1	100	93.701	Mus_caroli
ENSDORG00000013916	Sub1	100	92.913	ENSMUSG00000022205	Sub1	100	92.913	Mus_musculus
ENSDORG00000013916	Sub1	100	92.913	MGP_PahariEiJ_G0016056	Sub1	100	92.913	Mus_pahari
ENSDORG00000013916	Sub1	100	92.913	MGP_SPRETEiJ_G0020573	Sub1	100	92.913	Mus_spretus
ENSDORG00000013916	Sub1	100	97.638	ENSMPUG00000015185	-	100	97.638	Mustela_putorius_furo
ENSDORG00000013916	Sub1	100	96.850	ENSMPUG00000018418	-	100	96.850	Mustela_putorius_furo
ENSDORG00000013916	Sub1	100	96.063	ENSMLUG00000013685	-	95	96.063	Myotis_lucifugus
ENSDORG00000013916	Sub1	100	90.551	ENSMLUG00000009236	-	95	90.551	Myotis_lucifugus
ENSDORG00000013916	Sub1	100	93.701	ENSNGAG00000014072	-	100	93.701	Nannospalax_galili
ENSDORG00000013916	Sub1	100	81.890	ENSNGAG00000017212	-	100	81.890	Nannospalax_galili
ENSDORG00000013916	Sub1	100	90.551	ENSNGAG00000010782	-	84	90.551	Nannospalax_galili
ENSDORG00000013916	Sub1	82	70.192	ENSNBRG00000008451	sub1b	84	70.192	Neolamprologus_brichardi
ENSDORG00000013916	Sub1	100	91.339	ENSNLEG00000035968	-	100	91.339	Nomascus_leucogenys
ENSDORG00000013916	Sub1	100	96.063	ENSNLEG00000036068	SUB1	100	96.063	Nomascus_leucogenys
ENSDORG00000013916	Sub1	100	96.063	ENSNLEG00000018383	-	95	96.063	Nomascus_leucogenys
ENSDORG00000013916	Sub1	100	91.339	ENSMEUG00000007770	SUB1	100	91.339	Notamacropus_eugenii
ENSDORG00000013916	Sub1	100	94.488	ENSOPRG00000012887	SUB1	100	94.488	Ochotona_princeps
ENSDORG00000013916	Sub1	85	93.519	ENSODEG00000015114	-	98	93.443	Octodon_degus
ENSDORG00000013916	Sub1	100	96.850	ENSODEG00000001937	-	100	96.850	Octodon_degus
ENSDORG00000013916	Sub1	100	90.551	ENSODEG00000014558	-	84	90.551	Octodon_degus
ENSDORG00000013916	Sub1	100	91.339	ENSOANG00000002328	SUB1	95	91.339	Ornithorhynchus_anatinus
ENSDORG00000013916	Sub1	100	96.063	ENSOCUG00000006262	SUB1	60	96.063	Oryctolagus_cuniculus
ENSDORG00000013916	Sub1	100	96.850	ENSOGAG00000009012	-	100	96.850	Otolemur_garnettii
ENSDORG00000013916	Sub1	98	95.968	ENSOGAG00000000337	-	100	95.968	Otolemur_garnettii
ENSDORG00000013916	Sub1	100	96.850	ENSOARG00000012154	SUB1	100	96.850	Ovis_aries
ENSDORG00000013916	Sub1	100	96.850	ENSPPAG00000011212	SUB1	100	96.850	Pan_paniscus
ENSDORG00000013916	Sub1	100	97.638	ENSPPRG00000008557	SUB1	100	97.638	Panthera_pardus
ENSDORG00000013916	Sub1	100	97.638	ENSPTIG00000009466	SUB1	100	97.638	Panthera_tigris_altaica
ENSDORG00000013916	Sub1	100	90.551	ENSPTRG00000041644	-	100	90.551	Pan_troglodytes
ENSDORG00000013916	Sub1	100	96.850	ENSPTRG00000048895	SUB1	100	96.850	Pan_troglodytes
ENSDORG00000013916	Sub1	100	94.488	ENSPANG00000000672	-	91	94.488	Papio_anubis
ENSDORG00000013916	Sub1	100	96.850	ENSPANG00000000339	-	97	96.850	Papio_anubis
ENSDORG00000013916	Sub1	100	96.850	ENSPANG00000002644	-	95	96.850	Papio_anubis
ENSDORG00000013916	Sub1	100	91.339	ENSPANG00000035601	-	100	91.339	Papio_anubis
ENSDORG00000013916	Sub1	100	76.378	ENSPANG00000033272	-	90	76.378	Papio_anubis
ENSDORG00000013916	Sub1	100	73.228	ENSPKIG00000016923	sub1b	100	67.717	Paramormyrops_kingsleyae
ENSDORG00000013916	Sub1	100	89.764	ENSPSIG00000005731	SUB1	95	87.402	Pelodiscus_sinensis
ENSDORG00000013916	Sub1	100	81.102	ENSPCIG00000020827	-	100	81.102	Phascolarctos_cinereus
ENSDORG00000013916	Sub1	100	91.339	ENSPCIG00000020907	-	100	91.339	Phascolarctos_cinereus
ENSDORG00000013916	Sub1	100	91.339	ENSPPYG00000018347	-	100	91.339	Pongo_abelii
ENSDORG00000013916	Sub1	100	96.850	ENSPPYG00000015379	SUB1	100	96.850	Pongo_abelii
ENSDORG00000013916	Sub1	100	96.850	ENSPCOG00000014391	SUB1	100	96.850	Propithecus_coquereli
ENSDORG00000013916	Sub1	100	96.850	ENSPVAG00000004785	SUB1	100	96.850	Pteropus_vampyrus
ENSDORG00000013916	Sub1	100	70.866	ENSPNYG00000010975	sub1b	100	66.929	Pundamilia_nyererei
ENSDORG00000013916	Sub1	99	75.397	ENSPNAG00000005998	sub1b	99	71.429	Pygocentrus_nattereri
ENSDORG00000013916	Sub1	100	70.079	ENSPNAG00000008693	sub1a	100	70.866	Pygocentrus_nattereri
ENSDORG00000013916	Sub1	100	92.913	ENSRNOG00000050563	Sub1	100	92.913	Rattus_norvegicus
ENSDORG00000013916	Sub1	100	91.339	ENSRBIG00000031233	SUB1	100	91.339	Rhinopithecus_bieti
ENSDORG00000013916	Sub1	100	85.827	ENSRROG00000042718	-	90	85.827	Rhinopithecus_roxellana
ENSDORG00000013916	Sub1	100	96.850	ENSRROG00000040438	SUB1	100	96.850	Rhinopithecus_roxellana
ENSDORG00000013916	Sub1	100	96.850	ENSSBOG00000026994	SUB1	100	96.850	Saimiri_boliviensis_boliviensis
ENSDORG00000013916	Sub1	100	91.339	ENSSHAG00000014986	SUB1	100	91.339	Sarcophilus_harrisii
ENSDORG00000013916	Sub1	100	74.803	ENSSFOG00015017283	sub1b	100	70.079	Scleropages_formosus
ENSDORG00000013916	Sub1	100	74.803	ENSSFOG00015018386	sub1b	100	74.803	Scleropages_formosus
ENSDORG00000013916	Sub1	100	72.441	ENSSMAG00000000313	sub1b	100	66.929	Scophthalmus_maximus
ENSDORG00000013916	Sub1	100	71.654	ENSSDUG00000013854	sub1b	76	71.654	Seriola_dumerili
ENSDORG00000013916	Sub1	100	71.654	ENSSLDG00000000852	sub1b	100	66.142	Seriola_lalandi_dorsalis
ENSDORG00000013916	Sub1	100	88.189	ENSSPUG00000016817	SUB1	100	88.189	Sphenodon_punctatus
ENSDORG00000013916	Sub1	100	71.654	ENSSPAG00000019363	sub1b	100	66.142	Stegastes_partitus
ENSDORG00000013916	Sub1	100	96.850	ENSSSCG00000040294	-	87	96.850	Sus_scrofa
ENSDORG00000013916	Sub1	100	96.850	ENSSSCG00000032650	-	100	96.850	Sus_scrofa
ENSDORG00000013916	Sub1	100	88.189	ENSTGUG00000001918	SUB1	100	88.189	Taeniopygia_guttata
ENSDORG00000013916	Sub1	100	70.866	ENSTRUG00000024420	sub1b	100	66.929	Takifugu_rubripes
ENSDORG00000013916	Sub1	100	70.079	ENSTNIG00000002700	sub1b	100	66.929	Tetraodon_nigroviridis
ENSDORG00000013916	Sub1	100	91.339	ENSTBEG00000012861	-	100	91.339	Tupaia_belangeri
ENSDORG00000013916	Sub1	100	95.276	ENSTBEG00000004053	-	100	95.276	Tupaia_belangeri
ENSDORG00000013916	Sub1	100	95.276	ENSTBEG00000006504	-	100	95.276	Tupaia_belangeri
ENSDORG00000013916	Sub1	100	90.551	ENSTBEG00000011247	-	99	90.551	Tupaia_belangeri
ENSDORG00000013916	Sub1	99	88.095	ENSTBEG00000015821	-	100	88.095	Tupaia_belangeri
ENSDORG00000013916	Sub1	100	91.339	ENSTBEG00000001790	-	100	91.339	Tupaia_belangeri
ENSDORG00000013916	Sub1	81	96.117	ENSTTRG00000017324	SUB1	100	96.117	Tursiops_truncatus
ENSDORG00000013916	Sub1	100	97.638	ENSUAMG00000000182	SUB1	100	97.638	Ursus_americanus
ENSDORG00000013916	Sub1	100	97.638	ENSUMAG00000013792	SUB1	100	97.638	Ursus_maritimus
ENSDORG00000013916	Sub1	100	88.976	ENSVPAG00000011012	SUB1	100	88.976	Vicugna_pacos
ENSDORG00000013916	Sub1	100	97.638	ENSVVUG00000022166	-	100	97.638	Vulpes_vulpes
ENSDORG00000013916	Sub1	89	89.381	ENSVVUG00000025193	-	92	91.818	Vulpes_vulpes
ENSDORG00000013916	Sub1	100	79.845	ENSXETG00000027218	sub1	100	79.845	Xenopus_tropicalis