EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSDORG00000013917 (Gene tree)
Gene ID: 105987651
Gene Symbol: Mbd1
Alias: Cxxc3|PCM1
Full Name: methyl-CpG binding domain protein 1
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Minus strand
Length: 12019 bases
Position: chrKN672389.1:2310919-2322937
Accession: 105987651
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000013083	MBD	PF01429.19	4.8e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000013918	-	1677	XM_013018979	ENSDORP00000013083	558 (aa)	XP_012874433	UPI000BACEFBB

Gene Model

Click here to download ENSDORG00000013917's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000013917's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000013917	Mbd1	97	78.659	ENSG00000141644	MBD1	99	77.860	Homo_sapiens
ENSDORG00000013917	Mbd1	97	73.088	ENSAMEG00000000238	MBD1	86	73.088	Ailuropoda_melanoleuca
ENSDORG00000013917	Mbd1	59	38.857	ENSACAG00000006091	-	86	38.857	Anolis_carolinensis
ENSDORG00000013917	Mbd1	100	77.021	ENSANAG00000036253	MBD1	91	77.372	Aotus_nancymaae
ENSDORG00000013917	Mbd1	97	77.508	ENSBTAG00000003801	MBD1	90	78.419	Bos_taurus
ENSDORG00000013917	Mbd1	96	78.963	ENSCJAG00000004959	MBD1	87	79.268	Callithrix_jacchus
ENSDORG00000013917	Mbd1	98	81.439	ENSCAFG00000018928	MBD1	87	72.443	Canis_familiaris
ENSDORG00000013917	Mbd1	100	72.159	ENSCAFG00020024272	MBD1	92	72.159	Canis_lupus_dingo
ENSDORG00000013917	Mbd1	97	77.982	ENSCHIG00000021134	MBD1	99	67.559	Capra_hircus
ENSDORG00000013917	Mbd1	98	76.829	ENSTSYG00000000509	MBD1	99	72.085	Carlito_syrichta
ENSDORG00000013917	Mbd1	100	69.519	ENSCAPG00000015782	MBD1	100	69.014	Cavia_aperea
ENSDORG00000013917	Mbd1	100	54.094	ENSCPOG00000001671	MBD1	99	57.638	Cavia_porcellus
ENSDORG00000013917	Mbd1	96	78.354	ENSCCAG00000034600	MBD1	99	74.074	Cebus_capucinus
ENSDORG00000013917	Mbd1	97	79.268	ENSCATG00000029959	MBD1	99	74.558	Cercocebus_atys
ENSDORG00000013917	Mbd1	97	66.559	ENSCLAG00000007457	MBD1	87	67.042	Chinchilla_lanigera
ENSDORG00000013917	Mbd1	97	78.963	ENSCSAG00000018070	MBD1	90	78.963	Chlorocebus_sabaeus
ENSDORG00000013917	Mbd1	97	78.659	ENSCANG00000033425	MBD1	99	77.675	Colobus_angolensis_palliatus
ENSDORG00000013917	Mbd1	100	62.945	ENSCGRG00001014843	Mbd1	91	74.772	Cricetulus_griseus_chok1gshd
ENSDORG00000013917	Mbd1	100	58.913	ENSCGRG00000014135	Mbd1	100	66.192	Cricetulus_griseus_crigri
ENSDORG00000013917	Mbd1	100	71.307	ENSDNOG00000015998	MBD1	100	64.773	Dasypus_novemcinctus
ENSDORG00000013917	Mbd1	100	77.119	ENSEASG00005003857	MBD1	92	74.773	Equus_asinus_asinus
ENSDORG00000013917	Mbd1	100	77.119	ENSECAG00000011497	MBD1	73	79.885	Equus_caballus
ENSDORG00000013917	Mbd1	100	74.576	ENSFCAG00000015730	MBD1	99	70.599	Felis_catus
ENSDORG00000013917	Mbd1	98	73.466	ENSFDAG00000011085	MBD1	97	73.466	Fukomys_damarensis
ENSDORG00000013917	Mbd1	97	78.659	ENSGGOG00000016966	MBD1	99	77.675	Gorilla_gorilla
ENSDORG00000013917	Mbd1	96	79.245	ENSHGLG00000008740	MBD1	98	70.034	Heterocephalus_glaber_female
ENSDORG00000013917	Mbd1	96	74.081	ENSHGLG00100005198	MBD1	98	72.954	Heterocephalus_glaber_male
ENSDORG00000013917	Mbd1	100	68.581	ENSSTOG00000007780	MBD1	100	68.740	Ictidomys_tridecemlineatus
ENSDORG00000013917	Mbd1	100	76.950	ENSJJAG00000022859	Mbd1	100	76.950	Jaculus_jaculus
ENSDORG00000013917	Mbd1	100	69.492	ENSLAFG00000031328	MBD1	91	68.220	Loxodonta_africana
ENSDORG00000013917	Mbd1	97	78.963	ENSMFAG00000026335	MBD1	99	74.382	Macaca_fascicularis
ENSDORG00000013917	Mbd1	97	75.926	ENSMMUG00000009050	MBD1	90	75.463	Macaca_mulatta
ENSDORG00000013917	Mbd1	97	78.963	ENSMNEG00000038822	MBD1	99	74.382	Macaca_nemestrina
ENSDORG00000013917	Mbd1	97	78.963	ENSMLEG00000043121	MBD1	99	74.382	Mandrillus_leucophaeus
ENSDORG00000013917	Mbd1	97	76.855	ENSMICG00000006414	MBD1	99	75.362	Microcebus_murinus
ENSDORG00000013917	Mbd1	100	63.682	ENSMUSG00000024561	Mbd1	100	63.682	Mus_musculus
ENSDORG00000013917	Mbd1	100	63.419	MGP_PahariEiJ_G0019128	Mbd1	100	63.761	Mus_pahari
ENSDORG00000013917	Mbd1	100	61.489	MGP_SPRETEiJ_G0023304	Mbd1	100	61.489	Mus_spretus
ENSDORG00000013917	Mbd1	97	72.238	ENSMPUG00000008843	MBD1	87	72.238	Mustela_putorius_furo
ENSDORG00000013917	Mbd1	97	64.309	ENSMLUG00000008286	MBD1	95	64.309	Myotis_lucifugus
ENSDORG00000013917	Mbd1	100	71.951	ENSNGAG00000011412	Mbd1	100	71.951	Nannospalax_galili
ENSDORG00000013917	Mbd1	96	70.577	ENSNLEG00000032711	-	89	70.577	Nomascus_leucogenys
ENSDORG00000013917	Mbd1	97	78.354	ENSNLEG00000011661	-	99	77.757	Nomascus_leucogenys
ENSDORG00000013917	Mbd1	97	73.780	ENSOPRG00000007647	MBD1	90	73.780	Ochotona_princeps
ENSDORG00000013917	Mbd1	100	78.253	ENSODEG00000018451	MBD1	100	78.788	Octodon_degus
ENSDORG00000013917	Mbd1	97	71.889	ENSOCUG00000006554	MBD1	90	72.350	Oryctolagus_cuniculus
ENSDORG00000013917	Mbd1	97	73.543	ENSOGAG00000003784	MBD1	87	71.749	Otolemur_garnettii
ENSDORG00000013917	Mbd1	97	73.088	ENSOARG00000004218	MBD1	85	73.088	Ovis_aries
ENSDORG00000013917	Mbd1	97	78.963	ENSPPAG00000038886	MBD1	99	74.558	Pan_paniscus
ENSDORG00000013917	Mbd1	97	77.812	ENSPPRG00000021387	MBD1	99	70.775	Panthera_pardus
ENSDORG00000013917	Mbd1	97	78.116	ENSPTIG00000021231	MBD1	99	70.951	Panthera_tigris_altaica
ENSDORG00000013917	Mbd1	97	78.963	ENSPTRG00000010021	MBD1	99	74.558	Pan_troglodytes
ENSDORG00000013917	Mbd1	96	78.963	ENSPANG00000010867	MBD1	90	77.963	Papio_anubis
ENSDORG00000013917	Mbd1	100	65.979	ENSPEMG00000022630	Mbd1	100	66.093	Peromyscus_maniculatus_bairdii
ENSDORG00000013917	Mbd1	88	54.296	ENSPCIG00000027937	-	73	54.296	Phascolarctos_cinereus
ENSDORG00000013917	Mbd1	97	78.963	ENSPPYG00000009158	MBD1	81	78.963	Pongo_abelii
ENSDORG00000013917	Mbd1	96	69.207	ENSPCAG00000001648	MBD1	89	69.207	Procavia_capensis
ENSDORG00000013917	Mbd1	97	79.558	ENSPCOG00000012450	MBD1	99	78.637	Propithecus_coquereli
ENSDORG00000013917	Mbd1	100	57.143	ENSRNOG00000024104	Mbd1	100	57.659	Rattus_norvegicus
ENSDORG00000013917	Mbd1	97	75.000	ENSRBIG00000041294	MBD1	98	67.138	Rhinopithecus_bieti
ENSDORG00000013917	Mbd1	97	78.659	ENSRROG00000032517	MBD1	99	77.491	Rhinopithecus_roxellana
ENSDORG00000013917	Mbd1	96	79.268	ENSSBOG00000027169	MBD1	99	75.088	Saimiri_boliviensis_boliviensis
ENSDORG00000013917	Mbd1	73	37.716	ENSSHAG00000003661	-	70	46.224	Sarcophilus_harrisii
ENSDORG00000013917	Mbd1	97	78.659	ENSSSCG00000004516	MBD1	100	70.995	Sus_scrofa
ENSDORG00000013917	Mbd1	69	69.585	ENSTBEG00000012651	-	64	67.281	Tupaia_belangeri
ENSDORG00000013917	Mbd1	97	78.723	ENSTTRG00000015523	MBD1	90	79.635	Tursiops_truncatus
ENSDORG00000013917	Mbd1	89	80.986	ENSUAMG00000004752	MBD1	99	67.938	Ursus_americanus
ENSDORG00000013917	Mbd1	97	77.812	ENSUMAG00000002947	MBD1	90	78.116	Ursus_maritimus