EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDORG00000013967 (Gene tree)
Gene ID: 105988163
Gene Symbol: Zc3h6
Alias: 4631426G04Rik|4833425H18Rik
Full Name: zinc finger CCCH-type containing 6
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Minus strand
Length: 38167 bases
Position: chrKN672393.1:605840-644006
Accession: 105988163
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000013129	zf-CCCH	PF00642.24	7e-12	1	2
ENSDORP00000013129	zf-CCCH	PF00642.24	7e-12	2	2
ENSDORP00000013129	zf-CCCH_2	PF14608.6	9.9e-06	1	2
ENSDORP00000013129	zf-CCCH_2	PF14608.6	9.9e-06	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000034347	-	399	-	ENSDORP00000019315	132 (aa)	-	UPI000BAD19F0
ENSDORT00000013966	-	3531	XM_013019709	ENSDORP00000013129	1176 (aa)	XP_012875163	UPI000BAD1245

Gene Model

Click here to download ENSDORG00000013967's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000013967's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDORG00000013967	Zc3h6	57	49.533	ENSDORG00000002726	Zc3h4	99	32.308

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000013967	Zc3h6	100	82.003	ENSG00000188177	ZC3H6	99	82.343	Homo_sapiens
ENSDORG00000013967	Zc3h6	63	61.751	ENSAPOG00000002681	zc3h6	88	46.038	Acanthochromis_polyacanthus
ENSDORG00000013967	Zc3h6	100	80.051	ENSAMEG00000016194	ZC3H6	99	80.390	Ailuropoda_melanoleuca
ENSDORG00000013967	Zc3h6	61	66.321	ENSACIG00000021843	zc3h6	83	41.230	Amphilophus_citrinellus
ENSDORG00000013967	Zc3h6	79	41.523	ENSAPEG00000014561	zc3h6	88	45.841	Amphiprion_percula
ENSDORG00000013967	Zc3h6	100	61.204	ENSAPLG00000014287	ZC3H6	99	62.375	Anas_platyrhynchos
ENSDORG00000013967	Zc3h6	100	82.273	ENSANAG00000024229	ZC3H6	99	82.612	Aotus_nancymaae
ENSDORG00000013967	Zc3h6	100	82.273	ENSCJAG00000016479	ZC3H6	99	82.612	Callithrix_jacchus
ENSDORG00000013967	Zc3h6	100	80.782	ENSCAFG00000007160	ZC3H6	99	80.697	Canis_familiaris
ENSDORG00000013967	Zc3h6	100	79.762	ENSCAFG00020017525	ZC3H6	99	79.677	Canis_lupus_dingo
ENSDORG00000013967	Zc3h6	80	76.408	ENSCHIG00000019719	-	95	76.408	Capra_hircus
ENSDORG00000013967	Zc3h6	100	82.088	ENSTSYG00000031857	ZC3H6	99	82.088	Carlito_syrichta
ENSDORG00000013967	Zc3h6	100	76.570	ENSCPOG00000003445	ZC3H6	100	77.589	Cavia_porcellus
ENSDORG00000013967	Zc3h6	100	82.428	ENSCATG00000036595	ZC3H6	100	82.413	Cercocebus_atys
ENSDORG00000013967	Zc3h6	91	82.320	ENSCLAG00000006605	ZC3H6	100	82.320	Chinchilla_lanigera
ENSDORG00000013967	Zc3h6	91	82.413	ENSCSAG00000016793	ZC3H6	100	82.413	Chlorocebus_sabaeus
ENSDORG00000013967	Zc3h6	100	82.428	ENSCANG00000041036	ZC3H6	100	82.767	Colobus_angolensis_palliatus
ENSDORG00000013967	Zc3h6	100	72.519	ENSCGRG00001022022	Zc3h6	99	73.028	Cricetulus_griseus_chok1gshd
ENSDORG00000013967	Zc3h6	100	75.297	ENSCGRG00000016162	Zc3h6	100	75.806	Cricetulus_griseus_crigri
ENSDORG00000013967	Zc3h6	79	39.820	ENSCSEG00000012267	zc3h6	87	50.459	Cynoglossus_semilaevis
ENSDORG00000013967	Zc3h6	100	71.392	ENSDNOG00000044811	ZC3H6	99	71.138	Dasypus_novemcinctus
ENSDORG00000013967	Zc3h6	84	81.534	ENSEASG00005006493	ZC3H6	100	81.534	Equus_asinus_asinus
ENSDORG00000013967	Zc3h6	100	81.834	ENSECAG00000023620	ZC3H6	99	82.173	Equus_caballus
ENSDORG00000013967	Zc3h6	77	89.474	ENSEEUG00000013883	-	79	89.474	Erinaceus_europaeus
ENSDORG00000013967	Zc3h6	100	80.815	ENSFCAG00000008089	ZC3H6	99	81.070	Felis_catus
ENSDORG00000013967	Zc3h6	100	60.720	ENSFALG00000011589	ZC3H6	99	61.390	Ficedula_albicollis
ENSDORG00000013967	Zc3h6	100	82.173	ENSFDAG00000002521	ZC3H6	99	82.513	Fukomys_damarensis
ENSDORG00000013967	Zc3h6	100	60.604	ENSGALG00000008269	ZC3H6	97	61.358	Gallus_gallus
ENSDORG00000013967	Zc3h6	61	62.176	ENSGAFG00000006771	zc3h6	72	62.176	Gambusia_affinis
ENSDORG00000013967	Zc3h6	100	63.674	ENSGAGG00000010857	ZC3H6	99	64.178	Gopherus_agassizii
ENSDORG00000013967	Zc3h6	100	82.343	ENSGGOG00000001665	ZC3H6	99	82.683	Gorilla_gorilla
ENSDORG00000013967	Zc3h6	99	81.223	ENSHGLG00000011882	ZC3H6	96	81.563	Heterocephalus_glaber_female
ENSDORG00000013967	Zc3h6	100	78.862	ENSHGLG00100002559	ZC3H6	100	79.202	Heterocephalus_glaber_male
ENSDORG00000013967	Zc3h6	88	42.807	ENSHCOG00000012519	zc3h6	90	46.275	Hippocampus_comes
ENSDORG00000013967	Zc3h6	91	80.075	ENSSTOG00000008120	-	100	80.075	Ictidomys_tridecemlineatus
ENSDORG00000013967	Zc3h6	100	79.881	ENSJJAG00000013206	Zc3h6	99	79.626	Jaculus_jaculus
ENSDORG00000013967	Zc3h6	63	60.369	ENSKMAG00000016252	zc3h6	90	45.611	Kryptolebias_marmoratus
ENSDORG00000013967	Zc3h6	62	62.562	ENSLBEG00000003054	zc3h6	78	49.524	Labrus_bergylta
ENSDORG00000013967	Zc3h6	100	48.960	ENSLACG00000012014	ZC3H6	99	49.638	Latimeria_chalumnae
ENSDORG00000013967	Zc3h6	100	45.997	ENSLOCG00000016548	zc3h6	97	46.305	Lepisosteus_oculatus
ENSDORG00000013967	Zc3h6	94	75.340	ENSLAFG00000001151	ZC3H6	98	75.045	Loxodonta_africana
ENSDORG00000013967	Zc3h6	100	82.428	ENSMFAG00000036963	ZC3H6	99	82.767	Macaca_fascicularis
ENSDORG00000013967	Zc3h6	100	82.343	ENSMMUG00000016430	ZC3H6	99	82.683	Macaca_mulatta
ENSDORG00000013967	Zc3h6	100	82.003	ENSMNEG00000031225	ZC3H6	100	82.133	Macaca_nemestrina
ENSDORG00000013967	Zc3h6	100	82.513	ENSMLEG00000038821	ZC3H6	99	82.852	Mandrillus_leucophaeus
ENSDORG00000013967	Zc3h6	100	39.455	ENSMAMG00000021546	zc3h6	98	46.360	Mastacembelus_armatus
ENSDORG00000013967	Zc3h6	100	60.939	ENSMGAG00000003025	ZC3H6	99	61.526	Meleagris_gallopavo
ENSDORG00000013967	Zc3h6	100	75.297	ENSMAUG00000017009	Zc3h6	99	75.806	Mesocricetus_auratus
ENSDORG00000013967	Zc3h6	100	83.871	ENSMICG00000036353	ZC3H6	99	83.616	Microcebus_murinus
ENSDORG00000013967	Zc3h6	100	75.212	ENSMOCG00000002054	Zc3h6	99	75.212	Microtus_ochrogaster
ENSDORG00000013967	Zc3h6	100	65.356	ENSMODG00000006612	ZC3H6	99	65.356	Monodelphis_domestica
ENSDORG00000013967	Zc3h6	68	54.448	ENSMALG00000002048	zc3h6	97	43.662	Monopterus_albus
ENSDORG00000013967	Zc3h6	100	72.265	MGP_CAROLIEiJ_G0024278	Zc3h6	99	72.774	Mus_caroli
ENSDORG00000013967	Zc3h6	100	72.858	ENSMUSG00000042851	Zc3h6	99	73.367	Mus_musculus
ENSDORG00000013967	Zc3h6	100	72.434	MGP_PahariEiJ_G0025723	Zc3h6	99	72.774	Mus_pahari
ENSDORG00000013967	Zc3h6	100	73.028	MGP_SPRETEiJ_G0025198	Zc3h6	99	73.537	Mus_spretus
ENSDORG00000013967	Zc3h6	91	79.607	ENSMPUG00000009624	ZC3H6	100	80.449	Mustela_putorius_furo
ENSDORG00000013967	Zc3h6	100	75.552	ENSMLUG00000004896	ZC3H6	99	76.570	Myotis_lucifugus
ENSDORG00000013967	Zc3h6	95	77.500	ENSNGAG00000013596	Zc3h6	99	77.081	Nannospalax_galili
ENSDORG00000013967	Zc3h6	59	66.667	ENSNBRG00000015382	zc3h6	75	53.846	Neolamprologus_brichardi
ENSDORG00000013967	Zc3h6	99	81.648	ENSNLEG00000033657	ZC3H6	99	81.988	Nomascus_leucogenys
ENSDORG00000013967	Zc3h6	100	75.637	ENSOPRG00000012717	ZC3H6	99	76.061	Ochotona_princeps
ENSDORG00000013967	Zc3h6	94	79.746	ENSODEG00000009099	ZC3H6	98	79.727	Octodon_degus
ENSDORG00000013967	Zc3h6	79	41.079	ENSONIG00000009880	zc3h6	90	44.207	Oreochromis_niloticus
ENSDORG00000013967	Zc3h6	100	66.526	ENSOANG00000012054	-	96	67.625	Ornithorhynchus_anatinus
ENSDORG00000013967	Zc3h6	94	79.873	ENSOCUG00000011125	ZC3H6	100	79.645	Oryctolagus_cuniculus
ENSDORG00000013967	Zc3h6	79	40.061	ENSORLG00000011179	zc3h6	98	45.315	Oryzias_latipes
ENSDORG00000013967	Zc3h6	79	40.798	ENSORLG00020017202	zc3h6	98	45.174	Oryzias_latipes_hni
ENSDORG00000013967	Zc3h6	79	39.282	ENSORLG00015001664	zc3h6	98	44.981	Oryzias_latipes_hsok
ENSDORG00000013967	Zc3h6	88	41.441	ENSOMEG00000001296	zc3h6	90	46.408	Oryzias_melastigma
ENSDORG00000013967	Zc3h6	100	80.985	ENSOGAG00000002556	ZC3H6	99	81.324	Otolemur_garnettii
ENSDORG00000013967	Zc3h6	100	77.693	ENSOARG00000014503	ZC3H6	99	77.947	Ovis_aries
ENSDORG00000013967	Zc3h6	100	82.173	ENSPPAG00000030495	ZC3H6	100	82.513	Pan_paniscus
ENSDORG00000013967	Zc3h6	100	80.815	ENSPPRG00000005673	ZC3H6	99	81.154	Panthera_pardus
ENSDORG00000013967	Zc3h6	100	79.711	ENSPTIG00000015800	ZC3H6	99	80.051	Panthera_tigris_altaica
ENSDORG00000013967	Zc3h6	100	82.173	ENSPTRG00000012363	ZC3H6	99	82.513	Pan_troglodytes
ENSDORG00000013967	Zc3h6	100	82.598	ENSPANG00000025224	ZC3H6	99	82.937	Papio_anubis
ENSDORG00000013967	Zc3h6	63	67.708	ENSPKIG00000007353	zc3h6	91	52.667	Paramormyrops_kingsleyae
ENSDORG00000013967	Zc3h6	100	62.793	ENSPSIG00000002520	ZC3H6	100	64.219	Pelodiscus_sinensis
ENSDORG00000013967	Zc3h6	100	73.463	ENSPEMG00000000918	Zc3h6	100	73.799	Peromyscus_maniculatus_bairdii
ENSDORG00000013967	Zc3h6	91	68.704	ENSPCIG00000029741	ZC3H6	100	68.704	Phascolarctos_cinereus
ENSDORG00000013967	Zc3h6	61	66.146	ENSPFOG00000015748	zc3h6	86	50.658	Poecilia_formosa
ENSDORG00000013967	Zc3h6	61	66.146	ENSPLAG00000002469	zc3h6	86	50.658	Poecilia_latipinna
ENSDORG00000013967	Zc3h6	61	66.845	ENSPMEG00000020802	zc3h6	83	66.845	Poecilia_mexicana
ENSDORG00000013967	Zc3h6	62	63.107	ENSPREG00000023126	zc3h6	92	39.627	Poecilia_reticulata
ENSDORG00000013967	Zc3h6	79	73.679	ENSPCAG00000015468	ZC3H6	78	73.110	Procavia_capensis
ENSDORG00000013967	Zc3h6	100	83.857	ENSPCOG00000016627	ZC3H6	99	83.857	Propithecus_coquereli
ENSDORG00000013967	Zc3h6	69	88.119	ENSPVAG00000013728	ZC3H6	69	87.129	Pteropus_vampyrus
ENSDORG00000013967	Zc3h6	62	63.235	ENSPNYG00000018130	zc3h6	77	53.497	Pundamilia_nyererei
ENSDORG00000013967	Zc3h6	100	40.065	ENSPNAG00000009331	zc3h6	97	40.372	Pygocentrus_nattereri
ENSDORG00000013967	Zc3h6	100	74.533	ENSRNOG00000026277	Zc3h6	99	74.533	Rattus_norvegicus
ENSDORG00000013967	Zc3h6	100	82.612	ENSSBOG00000033489	ZC3H6	100	82.710	Saimiri_boliviensis_boliviensis
ENSDORG00000013967	Zc3h6	84	67.940	ENSSHAG00000016634	ZC3H6	100	67.940	Sarcophilus_harrisii
ENSDORG00000013967	Zc3h6	100	41.157	ENSSFOG00015004488	zc3h6	97	42.361	Scleropages_formosus
ENSDORG00000013967	Zc3h6	95	84.211	ENSSARG00000001035	ZC3H6	95	84.211	Sorex_araneus
ENSDORG00000013967	Zc3h6	61	59.055	ENSSPUG00000013031	-	82	36.332	Sphenodon_punctatus
ENSDORG00000013967	Zc3h6	100	80.136	ENSSSCG00000008096	ZC3H6	100	81.996	Sus_scrofa
ENSDORG00000013967	Zc3h6	100	60.436	ENSTGUG00000007468	ZC3H6	99	61.526	Taeniopygia_guttata
ENSDORG00000013967	Zc3h6	84	44.906	ENSTRUG00000012901	zc3h6	89	45.873	Takifugu_rubripes
ENSDORG00000013967	Zc3h6	97	39.060	ENSTNIG00000016608	zc3h6	89	46.705	Tetraodon_nigroviridis
ENSDORG00000013967	Zc3h6	86	82.482	ENSTBEG00000016232	ZC3H6	91	82.418	Tupaia_belangeri
ENSDORG00000013967	Zc3h6	82	75.731	ENSTTRG00000013154	ZC3H6	82	76.316	Tursiops_truncatus
ENSDORG00000013967	Zc3h6	91	79.607	ENSUAMG00000002401	ZC3H6	100	80.168	Ursus_americanus
ENSDORG00000013967	Zc3h6	91	79.607	ENSUMAG00000008663	ZC3H6	100	81.800	Ursus_maritimus
ENSDORG00000013967	Zc3h6	100	78.202	ENSVPAG00000005912	ZC3H6	100	78.239	Vicugna_pacos
ENSDORG00000013967	Zc3h6	91	80.150	ENSVVUG00000028662	ZC3H6	100	80.056	Vulpes_vulpes
ENSDORG00000013967	Zc3h6	89	59.318	ENSXETG00000013762	zc3h6	91	60.440	Xenopus_tropicalis
ENSDORG00000013967	Zc3h6	51	63.107	ENSXCOG00000011662	zc3h6	74	52.203	Xiphophorus_couchianus
ENSDORG00000013967	Zc3h6	61	66.146	ENSXMAG00000020822	zc3h6	85	49.565	Xiphophorus_maculatus