EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSDORG00000014263 (Gene tree)
Gene ID
105983730
Gene Symbol
Cpsf3
Alias
73 kDa
Full Name
cleavage and polyadenylation specific factor 3
Gene Type
protein_coding
Species
Dipodomys_ordii
Status
putative
Strand
Minus strand
Length
32932 bases
Position
chrKN672366.1:21775878-21808809
Accession
105983730
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSDORP00000013415CPSF73-100_CPF11718.81.3e-4711
ENSDORP00000013415Beta-CaspPF10996.84e-3411
ENSDORP00000013415Lactamase_BPF00753.278.5e-1911
ENSDORP00000013415RMMBLPF07521.121.3e-2111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSDORT00000014264-3127XM_013013733ENSDORP00000013415651 (aa)XP_012869187UPI000BACF585
Gene Model
Click here to download ENSDORG00000014263's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000014263's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSDORG00000014263Cpsf36739.597ENSDORG00000002045Ints117439.597
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSDORG00000014263Cpsf310099.078ENSG00000119203CPSF3100100.000Homo_sapiens
ENSDORG00000014263Cpsf37796.994ENSAPOG00000012241CPSF39096.982Acanthochromis_polyacanthus
ENSDORG00000014263Cpsf39986.728ENSAPOG00000022087cpsf39883.082Acanthochromis_polyacanthus
ENSDORG00000014263Cpsf310099.078ENSAMEG00000008493CPSF39599.078Ailuropoda_melanoleuca
ENSDORG00000014263Cpsf39184.422ENSACIG00000009846cpsf39484.422Amphilophus_citrinellus
ENSDORG00000014263Cpsf39287.458ENSACIG00000023663CPSF39487.458Amphilophus_citrinellus
ENSDORG00000014263Cpsf39988.889ENSAOCG00000010077CPSF39488.889Amphiprion_ocellaris
ENSDORG00000014263Cpsf39986.728ENSAOCG00000022056cpsf39491.327Amphiprion_ocellaris
ENSDORG00000014263Cpsf39988.889ENSAPEG00000021167CPSF39688.889Amphiprion_percula
ENSDORG00000014263Cpsf39986.883ENSAPEG00000019526cpsf39786.883Amphiprion_percula
ENSDORG00000014263Cpsf39984.105ENSATEG00000014525CPSF39384.105Anabas_testudineus
ENSDORG00000014263Cpsf39986.574ENSATEG00000003959cpsf39486.574Anabas_testudineus
ENSDORG00000014263Cpsf39896.088ENSAPLG00000006941CPSF39496.088Anas_platyrhynchos
ENSDORG00000014263Cpsf39294.020ENSACAG00000001759CPSF39594.020Anolis_carolinensis
ENSDORG00000014263Cpsf310092.320ENSANAG00000031254CPSF39592.320Aotus_nancymaae
ENSDORG00000014263Cpsf39787.539ENSACLG00000014484cpsf39587.539Astatotilapia_calliptera
ENSDORG00000014263Cpsf39287.291ENSACLG00000018846CPSF39487.291Astatotilapia_calliptera
ENSDORG00000014263Cpsf39988.889ENSAMXG00000004786cpsf39488.889Astyanax_mexicanus
ENSDORG00000014263Cpsf310099.078ENSBTAG00000019735CPSF39599.078Bos_taurus
ENSDORG00000014263Cpsf39559.213WBGene00013460cpsf-38959.213Caenorhabditis_elegans
ENSDORG00000014263Cpsf310099.078ENSCJAG00000006276CPSF39599.078Callithrix_jacchus
ENSDORG00000014263Cpsf310099.078ENSCAFG00000003375CPSF39199.078Canis_familiaris
ENSDORG00000014263Cpsf39599.838ENSCAFG00020026799CPSF310099.838Canis_lupus_dingo
ENSDORG00000014263Cpsf310099.078ENSCHIG00000013973CPSF39599.078Capra_hircus
ENSDORG00000014263Cpsf310099.078ENSTSYG00000002967CPSF39599.078Carlito_syrichta
ENSDORG00000014263Cpsf39797.634ENSCAPG00000013851CPSF39597.634Cavia_aperea
ENSDORG00000014263Cpsf310097.696ENSCPOG00000011299CPSF39597.696Cavia_porcellus
ENSDORG00000014263Cpsf310099.078ENSCCAG00000036730CPSF39599.078Cebus_capucinus
ENSDORG00000014263Cpsf310096.319ENSCATG00000014770CPSF39999.828Cercocebus_atys
ENSDORG00000014263Cpsf310097.389ENSCLAG00000002727CPSF39597.389Chinchilla_lanigera
ENSDORG00000014263Cpsf310090.937ENSCSAG00000007125CPSF39590.937Chlorocebus_sabaeus
ENSDORG00000014263Cpsf381100.000ENSCHOG00000000180CPSF37675.595Choloepus_hoffmanni
ENSDORG00000014263Cpsf39996.308ENSCPBG00000014074CPSF39496.308Chrysemys_picta_bellii
ENSDORG00000014263Cpsf39969.632ENSCING00000007214-9469.632Ciona_intestinalis
ENSDORG00000014263Cpsf310085.253ENSCANG00000034435CPSF39585.253Colobus_angolensis_palliatus
ENSDORG00000014263Cpsf310098.771ENSCGRG00001013134Cpsf39598.771Cricetulus_griseus_chok1gshd
ENSDORG00000014263Cpsf310098.771ENSCGRG00000018319Cpsf39598.771Cricetulus_griseus_crigri
ENSDORG00000014263Cpsf39988.117ENSCSEG00000002021CPSF39587.948Cynoglossus_semilaevis
ENSDORG00000014263Cpsf39988.735ENSCVAG00000015067CPSF39488.735Cyprinodon_variegatus
ENSDORG00000014263Cpsf39989.660ENSDARG00000027649cpsf39489.660Danio_rerio
ENSDORG00000014263Cpsf310097.393ENSDNOG00000008940CPSF39197.393Dasypus_novemcinctus
ENSDORG00000014263Cpsf39968.875FBgn0261065Cpsf739468.875Drosophila_melanogaster
ENSDORG00000014263Cpsf310085.714ENSETEG00000003893CPSF310085.714Echinops_telfairi
ENSDORG00000014263Cpsf39982.380ENSEBUG00000009018cpsf39182.380Eptatretus_burgeri
ENSDORG00000014263Cpsf310099.078ENSEASG00005003970CPSF39599.078Equus_asinus_asinus
ENSDORG00000014263Cpsf310099.078ENSECAG00000019911CPSF39899.002Equus_caballus
ENSDORG00000014263Cpsf310082.796ENSEEUG00000015422CPSF39582.796Erinaceus_europaeus
ENSDORG00000014263Cpsf39988.906ENSELUG00000013775cpsf39488.906Esox_lucius
ENSDORG00000014263Cpsf310099.078ENSFCAG00000007852CPSF39599.078Felis_catus
ENSDORG00000014263Cpsf39495.928ENSFALG00000006572CPSF39595.928Ficedula_albicollis
ENSDORG00000014263Cpsf310097.542ENSFDAG00000006317CPSF39497.542Fukomys_damarensis
ENSDORG00000014263Cpsf39986.574ENSFHEG00000014774cpsf39486.574Fundulus_heteroclitus
ENSDORG00000014263Cpsf35768.783ENSFHEG00000012186CPSF39168.783Fundulus_heteroclitus
ENSDORG00000014263Cpsf39987.963ENSGMOG00000003157cpsf39487.963Gadus_morhua
ENSDORG00000014263Cpsf39995.216ENSGALG00000016424CPSF39594.850Gallus_gallus
ENSDORG00000014263Cpsf39184.255ENSGAFG00000019449cpsf39484.255Gambusia_affinis
ENSDORG00000014263Cpsf39989.198ENSGAFG00000008016CPSF39489.198Gambusia_affinis
ENSDORG00000014263Cpsf36794.495ENSGAGG00000025583CPSF38794.495Gopherus_agassizii
ENSDORG00000014263Cpsf310096.697ENSGGOG00000001757CPSF39599.169Gorilla_gorilla
ENSDORG00000014263Cpsf35782.574ENSHBUG00000014332CPSF39282.574Haplochromis_burtoni
ENSDORG00000014263Cpsf39987.385ENSHBUG00000001188cpsf39587.385Haplochromis_burtoni
ENSDORG00000014263Cpsf310097.081ENSHGLG00000000666CPSF39497.081Heterocephalus_glaber_female
ENSDORG00000014263Cpsf310097.081ENSHGLG00100007765CPSF39497.081Heterocephalus_glaber_male
ENSDORG00000014263Cpsf39987.809ENSHCOG00000015957CPSF39387.809Hippocampus_comes
ENSDORG00000014263Cpsf39986.769ENSHCOG00000007251cpsf39586.769Hippocampus_comes
ENSDORG00000014263Cpsf39987.500ENSIPUG00000023488cpsf39487.500Ictalurus_punctatus
ENSDORG00000014263Cpsf310098.771ENSSTOG00000004476CPSF39598.771Ictidomys_tridecemlineatus
ENSDORG00000014263Cpsf310097.849ENSJJAG00000023415Cpsf39597.849Jaculus_jaculus
ENSDORG00000014263Cpsf39988.735ENSKMAG00000007317CPSF39488.735Kryptolebias_marmoratus
ENSDORG00000014263Cpsf39986.287ENSKMAG00000002806cpsf39486.287Kryptolebias_marmoratus
ENSDORG00000014263Cpsf35779.625ENSLBEG00000015018-9979.625Labrus_bergylta
ENSDORG00000014263Cpsf39988.735ENSLBEG00000013492CPSF39888.735Labrus_bergylta
ENSDORG00000014263Cpsf39782.595ENSLBEG00000020569cpsf39282.595Labrus_bergylta
ENSDORG00000014263Cpsf39984.722ENSLACG00000008308CPSF39484.722Latimeria_chalumnae
ENSDORG00000014263Cpsf39989.846ENSLOCG00000016823cpsf39489.846Lepisosteus_oculatus
ENSDORG00000014263Cpsf39997.372ENSLAFG00000009467CPSF39597.372Loxodonta_africana
ENSDORG00000014263Cpsf310099.078ENSMFAG00000001339CPSF39599.078Macaca_fascicularis
ENSDORG00000014263Cpsf39499.023ENSMMUG00000018038CPSF39599.023Macaca_mulatta
ENSDORG00000014263Cpsf310085.714ENSMNEG00000039447CPSF39585.714Macaca_nemestrina
ENSDORG00000014263Cpsf310099.232ENSMLEG00000026825CPSF39599.232Mandrillus_leucophaeus
ENSDORG00000014263Cpsf39286.167ENSMAMG00000008835CPSF39486.167Mastacembelus_armatus
ENSDORG00000014263Cpsf39986.883ENSMAMG00000003076cpsf39487.253Mastacembelus_armatus
ENSDORG00000014263Cpsf39987.385ENSMZEG00005014358cpsf39587.385Maylandia_zebra
ENSDORG00000014263Cpsf39989.506ENSMZEG00005006258CPSF39489.506Maylandia_zebra
ENSDORG00000014263Cpsf39795.268ENSMGAG00000013995CPSF39595.268Meleagris_gallopavo
ENSDORG00000014263Cpsf35396.501ENSMAUG00000000166Cpsf39196.501Mesocricetus_auratus
ENSDORG00000014263Cpsf310093.088ENSMICG00000002363CPSF39593.088Microcebus_murinus
ENSDORG00000014263Cpsf39599.029ENSMOCG00000020067Cpsf39599.029Microtus_ochrogaster
ENSDORG00000014263Cpsf37971.472ENSMMOG00000011923CPSF37877.857Mola_mola
ENSDORG00000014263Cpsf39483.388ENSMMOG00000018212CPSF39483.388Mola_mola
ENSDORG00000014263Cpsf310095.745ENSMODG00000014703CPSF39595.745Monodelphis_domestica
ENSDORG00000014263Cpsf39086.847ENSMALG00000011474CPSF39686.847Monopterus_albus
ENSDORG00000014263Cpsf39987.231ENSMALG00000016416cpsf39587.231Monopterus_albus
ENSDORG00000014263Cpsf310098.618MGP_CAROLIEiJ_G0017640Cpsf39598.618Mus_caroli
ENSDORG00000014263Cpsf310098.618ENSMUSG00000054309Cpsf396100.000Mus_musculus
ENSDORG00000014263Cpsf310098.464MGP_PahariEiJ_G0029397Cpsf39598.464Mus_pahari
ENSDORG00000014263Cpsf310098.618MGP_SPRETEiJ_G0018481Cpsf39598.618Mus_spretus
ENSDORG00000014263Cpsf310098.771ENSMPUG00000013213CPSF39598.771Mustela_putorius_furo
ENSDORG00000014263Cpsf310098.313ENSMLUG00000010636CPSF39598.313Myotis_lucifugus
ENSDORG00000014263Cpsf310098.464ENSNGAG00000019836Cpsf39598.464Nannospalax_galili
ENSDORG00000014263Cpsf39287.291ENSNBRG00000010525CPSF39487.291Neolamprologus_brichardi
ENSDORG00000014263Cpsf39986.923ENSNBRG00000004770cpsf39586.923Neolamprologus_brichardi
ENSDORG00000014263Cpsf310099.078ENSNLEG00000013359CPSF39599.078Nomascus_leucogenys
ENSDORG00000014263Cpsf39567.314ENSMEUG00000013117-9067.314Notamacropus_eugenii
ENSDORG00000014263Cpsf310088.940ENSOPRG00000008902CPSF39588.940Ochotona_princeps
ENSDORG00000014263Cpsf310097.081ENSODEG00000003129CPSF39597.081Octodon_degus
ENSDORG00000014263Cpsf39987.385ENSONIG00000018812cpsf39587.385Oreochromis_niloticus
ENSDORG00000014263Cpsf38296.234ENSOANG00000008577CPSF39496.234Ornithorhynchus_anatinus
ENSDORG00000014263Cpsf310098.618ENSOCUG00000003728CPSF39598.618Oryctolagus_cuniculus
ENSDORG00000014263Cpsf39985.077ENSORLG00000018854cpsf39585.077Oryzias_latipes
ENSDORG00000014263Cpsf39985.231ENSORLG00020013331cpsf39585.231Oryzias_latipes_hni
ENSDORG00000014263Cpsf39985.077ENSORLG00015011017cpsf39585.077Oryzias_latipes_hsok
ENSDORG00000014263Cpsf39984.923ENSOMEG00000010647cpsf39184.923Oryzias_melastigma
ENSDORG00000014263Cpsf310088.940ENSOGAG00000001680CPSF39588.940Otolemur_garnettii
ENSDORG00000014263Cpsf310099.078ENSOARG00000015073CPSF39599.078Ovis_aries
ENSDORG00000014263Cpsf310099.232ENSPPAG00000042457CPSF39599.232Pan_paniscus
ENSDORG00000014263Cpsf310099.078ENSPPRG00000016790CPSF39599.078Panthera_pardus
ENSDORG00000014263Cpsf39999.073ENSPTIG00000003920CPSF39599.073Panthera_tigris_altaica
ENSDORG00000014263Cpsf310099.232ENSPTRG00000011638CPSF39599.232Pan_troglodytes
ENSDORG00000014263Cpsf310098.925ENSPANG00000016798CPSF39598.925Papio_anubis
ENSDORG00000014263Cpsf39990.293ENSPKIG00000023646cpsf39590.065Paramormyrops_kingsleyae
ENSDORG00000014263Cpsf39994.769ENSPSIG00000016144CPSF39594.769Pelodiscus_sinensis
ENSDORG00000014263Cpsf35780.161ENSPMGG00000015311CPSF39280.161Periophthalmus_magnuspinnatus
ENSDORG00000014263Cpsf38785.515ENSPMGG00000006141-9985.515Periophthalmus_magnuspinnatus
ENSDORG00000014263Cpsf310098.003ENSPEMG00000017668Cpsf39598.003Peromyscus_maniculatus_bairdii
ENSDORG00000014263Cpsf38290.317ENSPMAG00000004841cpsf39990.317Petromyzon_marinus
ENSDORG00000014263Cpsf39797.161ENSPCIG00000009823CPSF39597.161Phascolarctos_cinereus
ENSDORG00000014263Cpsf39986.000ENSPFOG00000015922cpsf39586.000Poecilia_formosa
ENSDORG00000014263Cpsf39988.889ENSPFOG00000010418-9488.889Poecilia_formosa
ENSDORG00000014263Cpsf35782.038ENSPLAG00000021300-9282.038Poecilia_latipinna
ENSDORG00000014263Cpsf39986.000ENSPLAG00000000882cpsf39586.000Poecilia_latipinna
ENSDORG00000014263Cpsf39986.154ENSPMEG00000018309cpsf39586.154Poecilia_mexicana
ENSDORG00000014263Cpsf39183.752ENSPREG00000014875cpsf39483.752Poecilia_reticulata
ENSDORG00000014263Cpsf39983.179ENSPREG00000004482CPSF39383.179Poecilia_reticulata
ENSDORG00000014263Cpsf310094.470ENSPPYG00000012666CPSF39594.470Pongo_abelii
ENSDORG00000014263Cpsf310063.902ENSPCAG00000015042CPSF310063.902Procavia_capensis
ENSDORG00000014263Cpsf38792.199ENSPCOG00000023016CPSF39292.199Propithecus_coquereli
ENSDORG00000014263Cpsf310099.232ENSPVAG00000005324CPSF39599.232Pteropus_vampyrus
ENSDORG00000014263Cpsf38391.344ENSPNYG00000021047CPSF39191.344Pundamilia_nyererei
ENSDORG00000014263Cpsf39987.385ENSPNYG00000004405cpsf39587.385Pundamilia_nyererei
ENSDORG00000014263Cpsf39988.735ENSPNAG00000023060cpsf39488.735Pygocentrus_nattereri
ENSDORG00000014263Cpsf310098.618ENSRNOG00000052418Cpsf39598.618Rattus_norvegicus
ENSDORG00000014263Cpsf310092.934ENSRBIG00000041615CPSF39494.300Rhinopithecus_bieti
ENSDORG00000014263Cpsf310099.232ENSRROG00000033792CPSF39599.232Rhinopithecus_roxellana
ENSDORG00000014263Cpsf38843.683YLR277CYSH18443.683Saccharomyces_cerevisiae
ENSDORG00000014263Cpsf310092.542ENSSBOG00000027263CPSF39592.542Saimiri_boliviensis_boliviensis
ENSDORG00000014263Cpsf310097.235ENSSHAG00000007024CPSF39597.235Sarcophilus_harrisii
ENSDORG00000014263Cpsf39990.000ENSSFOG00015002108cpsf39589.701Scleropages_formosus
ENSDORG00000014263Cpsf39987.500ENSSMAG00000020534CPSF39587.500Scophthalmus_maximus
ENSDORG00000014263Cpsf39986.769ENSSDUG00000002828cpsf39286.769Seriola_dumerili
ENSDORG00000014263Cpsf39989.043ENSSDUG00000018498CPSF39489.043Seriola_dumerili
ENSDORG00000014263Cpsf39989.043ENSSLDG00000005234CPSF39489.043Seriola_lalandi_dorsalis
ENSDORG00000014263Cpsf39986.615ENSSLDG00000008469cpsf39191.017Seriola_lalandi_dorsalis
ENSDORG00000014263Cpsf310080.031ENSSARG00000005186CPSF39580.031Sorex_araneus
ENSDORG00000014263Cpsf39793.103ENSSPUG00000015525CPSF39393.103Sphenodon_punctatus
ENSDORG00000014263Cpsf39988.735ENSSPAG00000002906CPSF39488.735Stegastes_partitus
ENSDORG00000014263Cpsf39987.037ENSSPAG00000018579cpsf39487.037Stegastes_partitus
ENSDORG00000014263Cpsf310098.925ENSSSCG00000020799CPSF39598.925Sus_scrofa
ENSDORG00000014263Cpsf39996.142ENSTGUG00000013016CPSF39596.142Taeniopygia_guttata
ENSDORG00000014263Cpsf35773.995ENSTRUG00000013905CPSF39173.995Takifugu_rubripes
ENSDORG00000014263Cpsf39986.133ENSTRUG00000007030cpsf39386.133Takifugu_rubripes
ENSDORG00000014263Cpsf38093.699ENSTBEG00000002707CPSF37593.699Tupaia_belangeri
ENSDORG00000014263Cpsf38796.078ENSTTRG00000000861CPSF38396.078Tursiops_truncatus
ENSDORG00000014263Cpsf310099.078ENSUAMG00000007535CPSF39499.078Ursus_americanus
ENSDORG00000014263Cpsf39499.023ENSUMAG00000003676CPSF39599.023Ursus_maritimus
ENSDORG00000014263Cpsf39795.268ENSVPAG00000008041CPSF310095.268Vicugna_pacos
ENSDORG00000014263Cpsf310099.078ENSVVUG00000002194CPSF39599.078Vulpes_vulpes
ENSDORG00000014263Cpsf39990.923ENSXETG00000008263cpsf39490.923Xenopus_tropicalis
ENSDORG00000014263Cpsf39986.308ENSXCOG00000019695cpsf39586.308Xiphophorus_couchianus
ENSDORG00000014263Cpsf35280.588ENSXCOG00000000957-7980.588Xiphophorus_couchianus
ENSDORG00000014263Cpsf39989.043ENSXMAG00000027291CPSF39489.043Xiphophorus_maculatus
ENSDORG00000014263Cpsf39986.000ENSXMAG00000009784cpsf39586.000Xiphophorus_maculatus

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