EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDORG00000014292 (Gene tree)
Gene ID: 105980547
Gene Symbol: Prdm10
Alias: LOC382066|tristanin
Full Name: PR/SET domain 10
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Minus strand
Length: 76531 bases
Position: chrKN672356.1:2310804-2387334
Accession: 105980547
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000016025	zf-C2H2	PF00096.26	1.1e-33	1	5
ENSDORP00000016025	zf-C2H2	PF00096.26	1.1e-33	2	5
ENSDORP00000016025	zf-C2H2	PF00096.26	1.1e-33	3	5
ENSDORP00000016025	zf-C2H2	PF00096.26	1.1e-33	4	5
ENSDORP00000016025	zf-C2H2	PF00096.26	1.1e-33	5	5
ENSDORP00000013447	zf-C2H2	PF00096.26	2.5e-33	1	5
ENSDORP00000013447	zf-C2H2	PF00096.26	2.5e-33	2	5
ENSDORP00000013447	zf-C2H2	PF00096.26	2.5e-33	3	5
ENSDORP00000013447	zf-C2H2	PF00096.26	2.5e-33	4	5
ENSDORP00000013447	zf-C2H2	PF00096.26	2.5e-33	5	5
ENSDORP00000016025	zf-met	PF12874.7	3.8e-06	1	2
ENSDORP00000016025	zf-met	PF12874.7	3.8e-06	2	2
ENSDORP00000013447	zf-met	PF12874.7	4.8e-06	1	2
ENSDORP00000013447	zf-met	PF12874.7	4.8e-06	2	2
ENSDORP00000016025	zf-C2H2_jaz	PF12171.8	1.7e-17	1	1
ENSDORP00000013447	zf-C2H2_jaz	PF12171.8	3.7e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000014297	-	3438	XM_013009437	ENSDORP00000013447	1145 (aa)	XP_012864891	UPI000BAD1507
ENSDORT00000028607	-	5458	-	ENSDORP00000016025	1067 (aa)	-	UPI000BACEDB4

Gene Model

Click here to download ENSDORG00000014292's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000014292's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDORG00000014292	Prdm10	51	34.270	ENSDORG00000023595	Zfp35	85	34.659

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000014292	Prdm10	100	93.945	ENSG00000170325	PRDM10	100	94.798	Homo_sapiens
ENSDORG00000014292	Prdm10	99	94.345	ENSAMEG00000002425	PRDM10	100	90.628	Ailuropoda_melanoleuca
ENSDORG00000014292	Prdm10	100	83.952	ENSAPLG00000004858	PRDM10	100	84.124	Anas_platyrhynchos
ENSDORG00000014292	Prdm10	100	86.693	ENSANAG00000022064	PRDM10	100	79.432	Aotus_nancymaae
ENSDORG00000014292	Prdm10	100	92.021	ENSBTAG00000019001	PRDM10	100	91.847	Bos_taurus
ENSDORG00000014292	Prdm10	100	93.939	ENSCJAG00000009235	PRDM10	100	94.026	Callithrix_jacchus
ENSDORG00000014292	Prdm10	100	93.624	ENSCAFG00000010164	PRDM10	100	93.624	Canis_familiaris
ENSDORG00000014292	Prdm10	100	92.453	ENSCAFG00020010152	PRDM10	96	97.333	Canis_lupus_dingo
ENSDORG00000014292	Prdm10	100	92.368	ENSCHIG00000026530	PRDM10	100	92.194	Capra_hircus
ENSDORG00000014292	Prdm10	100	95.242	ENSTSYG00000000544	PRDM10	100	95.242	Carlito_syrichta
ENSDORG00000014292	Prdm10	100	85.924	ENSCAPG00000017296	PRDM10	97	91.379	Cavia_aperea
ENSDORG00000014292	Prdm10	93	86.207	ENSCPOG00000000389	PRDM10	98	78.888	Cavia_porcellus
ENSDORG00000014292	Prdm10	100	93.939	ENSCCAG00000024567	PRDM10	100	94.026	Cebus_capucinus
ENSDORG00000014292	Prdm10	100	94.194	ENSCATG00000040031	PRDM10	100	94.367	Cercocebus_atys
ENSDORG00000014292	Prdm10	100	91.717	ENSCLAG00000014605	PRDM10	100	91.976	Chinchilla_lanigera
ENSDORG00000014292	Prdm10	100	94.281	ENSCSAG00000002202	PRDM10	100	94.541	Chlorocebus_sabaeus
ENSDORG00000014292	Prdm10	99	84.630	ENSCPBG00000026880	PRDM10	99	81.151	Chrysemys_picta_bellii
ENSDORG00000014292	Prdm10	100	94.199	ENSCANG00000032669	PRDM10	100	94.286	Colobus_angolensis_palliatus
ENSDORG00000014292	Prdm10	100	93.293	ENSCGRG00001021647	Prdm10	98	93.380	Cricetulus_griseus_chok1gshd
ENSDORG00000014292	Prdm10	100	93.293	ENSCGRG00000006562	Prdm10	98	93.380	Cricetulus_griseus_crigri
ENSDORG00000014292	Prdm10	82	92.827	ENSDNOG00000001366	PRDM10	95	92.827	Dasypus_novemcinctus
ENSDORG00000014292	Prdm10	100	93.235	ENSEASG00005022914	PRDM10	100	93.322	Equus_asinus_asinus
ENSDORG00000014292	Prdm10	100	93.148	ENSECAG00000011499	PRDM10	100	93.235	Equus_caballus
ENSDORG00000014292	Prdm10	99	93.685	ENSFCAG00000004111	PRDM10	96	93.722	Felis_catus
ENSDORG00000014292	Prdm10	99	84.680	ENSFALG00000004873	PRDM10	100	80.869	Ficedula_albicollis
ENSDORG00000014292	Prdm10	100	91.567	ENSFDAG00000017311	PRDM10	100	91.482	Fukomys_damarensis
ENSDORG00000014292	Prdm10	99	84.724	ENSGALG00000033660	PRDM10	99	84.381	Gallus_gallus
ENSDORG00000014292	Prdm10	98	61.853	ENSGACG00000012293	prdm10	100	60.601	Gasterosteus_aculeatus
ENSDORG00000014292	Prdm10	100	82.560	ENSGAGG00000012523	PRDM10	99	82.474	Gopherus_agassizii
ENSDORG00000014292	Prdm10	100	94.778	ENSGGOG00000015359	PRDM10	100	94.783	Gorilla_gorilla
ENSDORG00000014292	Prdm10	100	91.852	ENSHGLG00000001106	PRDM10	100	92.024	Heterocephalus_glaber_female
ENSDORG00000014292	Prdm10	100	92.268	ENSHGLG00100002350	PRDM10	100	92.182	Heterocephalus_glaber_male
ENSDORG00000014292	Prdm10	100	94.892	ENSSTOG00000002015	PRDM10	100	95.065	Ictidomys_tridecemlineatus
ENSDORG00000014292	Prdm10	81	93.333	ENSJJAG00000021493	Prdm10	90	92.739	Jaculus_jaculus
ENSDORG00000014292	Prdm10	100	89.682	ENSLAFG00000031867	PRDM10	100	89.682	Loxodonta_africana
ENSDORG00000014292	Prdm10	100	94.281	ENSMFAG00000031008	PRDM10	100	94.454	Macaca_fascicularis
ENSDORG00000014292	Prdm10	100	94.281	ENSMMUG00000017555	PRDM10	100	94.454	Macaca_mulatta
ENSDORG00000014292	Prdm10	100	94.194	ENSMNEG00000036493	PRDM10	100	94.367	Macaca_nemestrina
ENSDORG00000014292	Prdm10	93	92.903	ENSMLEG00000042028	PRDM10	98	94.000	Mandrillus_leucophaeus
ENSDORG00000014292	Prdm10	99	84.586	ENSMGAG00000001112	PRDM10	100	81.187	Meleagris_gallopavo
ENSDORG00000014292	Prdm10	100	94.367	ENSMICG00000013888	PRDM10	100	94.541	Microcebus_murinus
ENSDORG00000014292	Prdm10	100	91.816	ENSMOCG00000021853	Prdm10	100	91.731	Microtus_ochrogaster
ENSDORG00000014292	Prdm10	82	86.389	ENSMODG00000004979	PRDM10	99	86.621	Monodelphis_domestica
ENSDORG00000014292	Prdm10	100	92.157	ENSMUSG00000042496	Prdm10	100	92.242	Mus_musculus
ENSDORG00000014292	Prdm10	100	93.745	MGP_SPRETEiJ_G0033061	-	100	93.831	Mus_spretus
ENSDORG00000014292	Prdm10	100	93.842	ENSMPUG00000008711	PRDM10	99	93.842	Mustela_putorius_furo
ENSDORG00000014292	Prdm10	100	92.653	ENSMLUG00000013051	PRDM10	100	92.826	Myotis_lucifugus
ENSDORG00000014292	Prdm10	100	95.721	ENSNGAG00000000580	Prdm10	100	95.633	Nannospalax_galili
ENSDORG00000014292	Prdm10	100	94.194	ENSNLEG00000007488	PRDM10	100	94.367	Nomascus_leucogenys
ENSDORG00000014292	Prdm10	100	91.189	ENSODEG00000005309	PRDM10	100	91.275	Octodon_degus
ENSDORG00000014292	Prdm10	99	79.870	ENSOANG00000000577	-	100	77.645	Ornithorhynchus_anatinus
ENSDORG00000014292	Prdm10	100	92.801	ENSOCUG00000003736	PRDM10	100	92.888	Oryctolagus_cuniculus
ENSDORG00000014292	Prdm10	100	93.092	ENSOGAG00000010723	PRDM10	100	92.919	Otolemur_garnettii
ENSDORG00000014292	Prdm10	100	92.281	ENSOARG00000014507	PRDM10	100	92.108	Ovis_aries
ENSDORG00000014292	Prdm10	100	94.604	ENSPPAG00000042881	PRDM10	100	94.609	Pan_paniscus
ENSDORG00000014292	Prdm10	100	93.408	ENSPPRG00000007002	PRDM10	100	93.408	Panthera_pardus
ENSDORG00000014292	Prdm10	100	93.322	ENSPTIG00000013331	PRDM10	100	93.322	Panthera_tigris_altaica
ENSDORG00000014292	Prdm10	100	94.778	ENSPTRG00000004477	PRDM10	100	94.783	Pan_troglodytes
ENSDORG00000014292	Prdm10	100	94.194	ENSPANG00000017470	PRDM10	100	94.367	Papio_anubis
ENSDORG00000014292	Prdm10	100	92.545	ENSPEMG00000014985	Prdm10	100	92.545	Peromyscus_maniculatus_bairdii
ENSDORG00000014292	Prdm10	100	94.291	ENSPPYG00000004061	PRDM10	100	94.291	Pongo_abelii
ENSDORG00000014292	Prdm10	93	85.385	ENSPCAG00000014514	PRDM10	100	83.754	Procavia_capensis
ENSDORG00000014292	Prdm10	100	79.706	ENSPCOG00000023406	PRDM10	100	80.812	Propithecus_coquereli
ENSDORG00000014292	Prdm10	100	93.345	ENSPVAG00000012764	PRDM10	100	93.345	Pteropus_vampyrus
ENSDORG00000014292	Prdm10	100	94.333	ENSRNOG00000007853	Prdm10	100	94.420	Rattus_norvegicus
ENSDORG00000014292	Prdm10	100	94.118	ENSRBIG00000030924	PRDM10	100	94.118	Rhinopithecus_bieti
ENSDORG00000014292	Prdm10	100	94.118	ENSRROG00000034334	PRDM10	100	94.118	Rhinopithecus_roxellana
ENSDORG00000014292	Prdm10	100	94.031	ENSSBOG00000008773	PRDM10	100	94.031	Saimiri_boliviensis_boliviensis
ENSDORG00000014292	Prdm10	99	86.423	ENSSHAG00000004503	PRDM10	99	85.788	Sarcophilus_harrisii
ENSDORG00000014292	Prdm10	68	100.000	ENSSARG00000013953	-	68	100.000	Sorex_araneus
ENSDORG00000014292	Prdm10	99	83.832	ENSSPUG00000001178	PRDM10	97	84.295	Sphenodon_punctatus
ENSDORG00000014292	Prdm10	100	91.271	ENSSSCG00000015243	PRDM10	100	92.103	Sus_scrofa
ENSDORG00000014292	Prdm10	99	84.349	ENSTGUG00000000530	PRDM10	100	83.305	Taeniopygia_guttata
ENSDORG00000014292	Prdm10	94	94.286	ENSTBEG00000007221	PRDM10	94	92.035	Tupaia_belangeri
ENSDORG00000014292	Prdm10	100	90.061	ENSTTRG00000009189	PRDM10	100	89.542	Tursiops_truncatus
ENSDORG00000014292	Prdm10	91	93.951	ENSUAMG00000018832	PRDM10	96	93.951	Ursus_americanus
ENSDORG00000014292	Prdm10	99	93.925	ENSUMAG00000003167	PRDM10	98	95.134	Ursus_maritimus
ENSDORG00000014292	Prdm10	100	93.408	ENSVVUG00000019878	PRDM10	100	93.408	Vulpes_vulpes
ENSDORG00000014292	Prdm10	99	71.925	ENSXETG00000032173	PRDM10	88	71.737	Xenopus_tropicalis