EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSDORG00000014298 (Gene tree)
Gene ID: 105999271
Gene Symbol: Trmt1
Alias: 6720406L13Rik|D8Ertd812e
Full Name: tRNA methyltransferase 1
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Minus strand
Length: 9033 bases
Position: chrKN672530.1:597998-607030
Accession: 105999271
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000021923	zf-CCCH	PF00642.24	8.5e-06	1	1
ENSDORP00000013446	zf-CCCH	PF00642.24	9e-06	1	1
ENSDORP00000013446	TRM	PF02005.16	9.5e-136	1	1
ENSDORP00000021923	TRM	PF02005.16	7.7e-127	1	1
ENSDORP00000021923	Met_10	PF02475.16	2.2e-08	1	1
ENSDORP00000013446	Met_10	PF02475.16	2.4e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000031233	-	1854	-	ENSDORP00000021923	617 (aa)	-	UPI000BAD038C
ENSDORT00000014296	-	1941	XM_013034246	ENSDORP00000013446	646 (aa)	XP_012889700	UPI000BAD1077

Gene Model

Click here to download ENSDORG00000014298's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000014298's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000014298	Trmt1	98	84.961	ENSG00000104907	TRMT1	100	92.670	Homo_sapiens
ENSDORG00000014298	Trmt1	99	80.428	ENSAMEG00000012598	TRMT1	97	80.428	Ailuropoda_melanoleuca
ENSDORG00000014298	Trmt1	90	55.333	ENSACIG00000018680	trmt1	91	55.333	Amphilophus_citrinellus
ENSDORG00000014298	Trmt1	89	63.851	ENSAOCG00000006781	trmt1	88	63.851	Amphiprion_ocellaris
ENSDORG00000014298	Trmt1	89	63.851	ENSAPEG00000007712	trmt1	88	63.851	Amphiprion_percula
ENSDORG00000014298	Trmt1	87	66.318	ENSATEG00000001872	trmt1	84	66.318	Anabas_testudineus
ENSDORG00000014298	Trmt1	88	64.888	ENSACAG00000003825	TRMT1	93	64.888	Anolis_carolinensis
ENSDORG00000014298	Trmt1	96	82.148	ENSANAG00000023016	TRMT1	98	83.987	Aotus_nancymaae
ENSDORG00000014298	Trmt1	86	62.697	ENSACLG00000010073	trmt1	92	62.697	Astatotilapia_calliptera
ENSDORG00000014298	Trmt1	91	63.403	ENSAMXG00000012026	trmt1	92	63.403	Astyanax_mexicanus
ENSDORG00000014298	Trmt1	99	81.611	ENSBTAG00000019325	TRMT1	93	81.611	Bos_taurus
ENSDORG00000014298	Trmt1	80	39.147	WBGene00006613	trm-1	96	39.147	Caenorhabditis_elegans
ENSDORG00000014298	Trmt1	98	80.186	ENSCJAG00000004566	TRMT1	99	80.186	Callithrix_jacchus
ENSDORG00000014298	Trmt1	99	81.957	ENSCAFG00000017070	TRMT1	99	83.360	Canis_familiaris
ENSDORG00000014298	Trmt1	99	81.920	ENSCAFG00020005397	TRMT1	99	81.920	Canis_lupus_dingo
ENSDORG00000014298	Trmt1	99	81.791	ENSCHIG00000013569	TRMT1	99	81.791	Capra_hircus
ENSDORG00000014298	Trmt1	98	78.140	ENSTSYG00000003207	TRMT1	99	77.660	Carlito_syrichta
ENSDORG00000014298	Trmt1	84	77.061	ENSCAPG00000003355	TRMT1	98	77.061	Cavia_aperea
ENSDORG00000014298	Trmt1	98	78.947	ENSCPOG00000011754	TRMT1	97	78.947	Cavia_porcellus
ENSDORG00000014298	Trmt1	99	78.506	ENSCCAG00000022263	TRMT1	98	82.815	Cebus_capucinus
ENSDORG00000014298	Trmt1	99	84.170	ENSCATG00000039850	TRMT1	99	84.170	Cercocebus_atys
ENSDORG00000014298	Trmt1	84	68.922	ENSCATG00000038220	-	98	69.133	Cercocebus_atys
ENSDORG00000014298	Trmt1	98	82.353	ENSCLAG00000015295	TRMT1	98	79.621	Chinchilla_lanigera
ENSDORG00000014298	Trmt1	79	84.762	ENSCSAG00000006500	TRMT1	99	84.762	Chlorocebus_sabaeus
ENSDORG00000014298	Trmt1	89	67.627	ENSCPBG00000023866	TRMT1	87	67.627	Chrysemys_picta_bellii
ENSDORG00000014298	Trmt1	83	44.640	ENSCING00000002884	-	98	44.640	Ciona_intestinalis
ENSDORG00000014298	Trmt1	83	45.307	ENSCSAVG00000010927	-	100	45.471	Ciona_savignyi
ENSDORG00000014298	Trmt1	92	66.941	ENSCANG00000031650	-	96	66.667	Colobus_angolensis_palliatus
ENSDORG00000014298	Trmt1	99	70.216	ENSCANG00000040631	TRMT1	99	70.216	Colobus_angolensis_palliatus
ENSDORG00000014298	Trmt1	99	79.909	ENSCGRG00001022594	Trmt1	99	79.909	Cricetulus_griseus_chok1gshd
ENSDORG00000014298	Trmt1	99	79.909	ENSCGRG00000017732	Trmt1	99	79.909	Cricetulus_griseus_crigri
ENSDORG00000014298	Trmt1	86	64.623	ENSCSEG00000001643	trmt1	84	66.082	Cynoglossus_semilaevis
ENSDORG00000014298	Trmt1	86	65.499	ENSCVAG00000011886	trmt1	85	65.499	Cyprinodon_variegatus
ENSDORG00000014298	Trmt1	86	64.615	ENSDARG00000010978	trmt1	85	64.948	Danio_rerio
ENSDORG00000014298	Trmt1	84	59.821	ENSDNOG00000048240	-	95	59.821	Dasypus_novemcinctus
ENSDORG00000014298	Trmt1	77	47.683	FBgn0032430	CG6388	87	47.683	Drosophila_melanogaster
ENSDORG00000014298	Trmt1	59	79.443	ENSETEG00000015483	-	54	79.443	Echinops_telfairi
ENSDORG00000014298	Trmt1	78	51.060	ENSEBUG00000003449	trmt1	75	51.308	Eptatretus_burgeri
ENSDORG00000014298	Trmt1	95	82.240	ENSEASG00005004050	TRMT1	100	81.818	Equus_asinus_asinus
ENSDORG00000014298	Trmt1	95	82.560	ENSECAG00000016149	TRMT1	100	82.132	Equus_caballus
ENSDORG00000014298	Trmt1	52	84.462	ENSEEUG00000014102	-	84	84.462	Erinaceus_europaeus
ENSDORG00000014298	Trmt1	86	64.076	ENSELUG00000021659	trmt1	85	64.076	Esox_lucius
ENSDORG00000014298	Trmt1	99	81.402	ENSFCAG00000000483	TRMT1	99	81.402	Felis_catus
ENSDORG00000014298	Trmt1	99	79.604	ENSFDAG00000007386	TRMT1	99	79.604	Fukomys_damarensis
ENSDORG00000014298	Trmt1	87	62.371	ENSFHEG00000012865	trmt1	90	65.741	Fundulus_heteroclitus
ENSDORG00000014298	Trmt1	87	59.059	ENSGMOG00000006564	trmt1	98	59.582	Gadus_morhua
ENSDORG00000014298	Trmt1	87	65.336	ENSGAFG00000011862	trmt1	89	65.336	Gambusia_affinis
ENSDORG00000014298	Trmt1	88	61.301	ENSGACG00000000227	trmt1	94	61.433	Gasterosteus_aculeatus
ENSDORG00000014298	Trmt1	93	65.466	ENSGAGG00000016432	TRMT1	89	65.466	Gopherus_agassizii
ENSDORG00000014298	Trmt1	98	85.271	ENSGGOG00000014007	TRMT1	99	84.650	Gorilla_gorilla
ENSDORG00000014298	Trmt1	86	55.908	ENSHBUG00000008821	trmt1	93	55.908	Haplochromis_burtoni
ENSDORG00000014298	Trmt1	99	80.551	ENSHGLG00000015972	TRMT1	99	80.551	Heterocephalus_glaber_female
ENSDORG00000014298	Trmt1	99	74.679	ENSHGLG00100018112	TRMT1	99	74.679	Heterocephalus_glaber_male
ENSDORG00000014298	Trmt1	87	61.606	ENSHCOG00000009447	trmt1	88	61.606	Hippocampus_comes
ENSDORG00000014298	Trmt1	86	64.041	ENSIPUG00000002899	trmt1	85	64.384	Ictalurus_punctatus
ENSDORG00000014298	Trmt1	99	82.979	ENSSTOG00000012531	TRMT1	99	82.979	Ictidomys_tridecemlineatus
ENSDORG00000014298	Trmt1	94	82.047	ENSJJAG00000017154	Trmt1	99	80.063	Jaculus_jaculus
ENSDORG00000014298	Trmt1	89	63.203	ENSKMAG00000011809	trmt1	97	63.203	Kryptolebias_marmoratus
ENSDORG00000014298	Trmt1	86	64.974	ENSLBEG00000012703	trmt1	84	64.974	Labrus_bergylta
ENSDORG00000014298	Trmt1	89	56.229	ENSLACG00000014585	TRMT1	98	55.611	Latimeria_chalumnae
ENSDORG00000014298	Trmt1	87	60.000	ENSLOCG00000006479	trmt1	97	60.929	Lepisosteus_oculatus
ENSDORG00000014298	Trmt1	98	81.085	ENSLAFG00000014072	TRMT1	99	81.085	Loxodonta_africana
ENSDORG00000014298	Trmt1	99	84.323	ENSMFAG00000033143	TRMT1	99	84.323	Macaca_fascicularis
ENSDORG00000014298	Trmt1	99	79.904	ENSMMUG00000001167	TRMT1	100	79.904	Macaca_mulatta
ENSDORG00000014298	Trmt1	99	84.018	ENSMNEG00000037867	TRMT1	99	84.018	Macaca_nemestrina
ENSDORG00000014298	Trmt1	99	83.841	ENSMLEG00000016142	TRMT1	99	83.841	Mandrillus_leucophaeus
ENSDORG00000014298	Trmt1	94	62.124	ENSMAMG00000004357	trmt1	93	62.124	Mastacembelus_armatus
ENSDORG00000014298	Trmt1	86	63.222	ENSMZEG00005014510	trmt1	85	63.222	Maylandia_zebra
ENSDORG00000014298	Trmt1	97	80.811	ENSMAUG00000011134	Trmt1	99	79.728	Mesocricetus_auratus
ENSDORG00000014298	Trmt1	99	84.251	ENSMICG00000000793	TRMT1	99	84.251	Microcebus_murinus
ENSDORG00000014298	Trmt1	98	80.590	ENSMOCG00000015895	Trmt1	99	79.607	Microtus_ochrogaster
ENSDORG00000014298	Trmt1	86	63.240	ENSMMOG00000011097	trmt1	92	63.240	Mola_mola
ENSDORG00000014298	Trmt1	94	72.347	ENSMODG00000011619	TRMT1	100	72.347	Monodelphis_domestica
ENSDORG00000014298	Trmt1	99	79.607	MGP_CAROLIEiJ_G0031304	Trmt1	99	79.607	Mus_caroli
ENSDORG00000014298	Trmt1	99	79.607	ENSMUSG00000001909	Trmt1	99	79.607	Mus_musculus
ENSDORG00000014298	Trmt1	99	79.154	MGP_SPRETEiJ_G0032422	Trmt1	99	79.154	Mus_spretus
ENSDORG00000014298	Trmt1	99	80.518	ENSMPUG00000004210	TRMT1	94	80.518	Mustela_putorius_furo
ENSDORG00000014298	Trmt1	99	81.763	ENSMLUG00000012809	TRMT1	98	81.763	Myotis_lucifugus
ENSDORG00000014298	Trmt1	100	79.217	ENSNGAG00000022486	Trmt1	100	79.217	Nannospalax_galili
ENSDORG00000014298	Trmt1	74	65.868	ENSNBRG00000024376	trmt1	85	65.868	Neolamprologus_brichardi
ENSDORG00000014298	Trmt1	83	87.209	ENSNLEG00000013019	-	99	84.865	Nomascus_leucogenys
ENSDORG00000014298	Trmt1	91	72.575	ENSMEUG00000013756	TRMT1	100	72.575	Notamacropus_eugenii
ENSDORG00000014298	Trmt1	79	84.634	ENSOPRG00000009471	-	79	84.634	Ochotona_princeps
ENSDORG00000014298	Trmt1	99	79.635	ENSODEG00000010323	TRMT1	98	79.635	Octodon_degus
ENSDORG00000014298	Trmt1	90	64.478	ENSONIG00000000400	trmt1	95	64.478	Oreochromis_niloticus
ENSDORG00000014298	Trmt1	79	84.000	ENSOCUG00000021934	TRMT1	99	84.000	Oryctolagus_cuniculus
ENSDORG00000014298	Trmt1	91	58.604	ENSORLG00000020074	trmt1	96	58.604	Oryzias_latipes
ENSDORG00000014298	Trmt1	94	59.652	ENSORLG00020007561	trmt1	95	59.652	Oryzias_latipes_hni
ENSDORG00000014298	Trmt1	86	64.098	ENSORLG00015006547	trmt1	86	64.098	Oryzias_latipes_hsok
ENSDORG00000014298	Trmt1	93	60.548	ENSOMEG00000019343	trmt1	94	60.548	Oryzias_melastigma
ENSDORG00000014298	Trmt1	93	82.573	ENSOGAG00000025576	TRMT1	96	82.899	Otolemur_garnettii
ENSDORG00000014298	Trmt1	99	68.701	ENSOARG00000009397	TRMT1	93	68.266	Ovis_aries
ENSDORG00000014298	Trmt1	99	74.615	ENSPPRG00000012117	TRMT1	99	74.615	Panthera_pardus
ENSDORG00000014298	Trmt1	83	83.784	ENSPTIG00000008833	TRMT1	98	83.784	Panthera_tigris_altaica
ENSDORG00000014298	Trmt1	96	64.501	ENSPTRG00000050421	-	96	64.501	Pan_troglodytes
ENSDORG00000014298	Trmt1	98	84.961	ENSPTRG00000010557	TRMT1	99	84.347	Pan_troglodytes
ENSDORG00000014298	Trmt1	99	84.323	ENSPANG00000009247	TRMT1	99	84.323	Papio_anubis
ENSDORG00000014298	Trmt1	85	68.619	ENSPANG00000034058	-	96	68.828	Papio_anubis
ENSDORG00000014298	Trmt1	87	66.263	ENSPKIG00000005309	trmt1	84	66.263	Paramormyrops_kingsleyae
ENSDORG00000014298	Trmt1	85	61.111	ENSPSIG00000008762	TRMT1	80	61.111	Pelodiscus_sinensis
ENSDORG00000014298	Trmt1	90	62.270	ENSPMGG00000019764	trmt1	94	62.270	Periophthalmus_magnuspinnatus
ENSDORG00000014298	Trmt1	97	82.353	ENSPEMG00000016247	Trmt1	99	80.885	Peromyscus_maniculatus_bairdii
ENSDORG00000014298	Trmt1	86	59.545	ENSPMAG00000004329	trmt1	89	59.545	Petromyzon_marinus
ENSDORG00000014298	Trmt1	97	70.279	ENSPCIG00000019273	TRMT1	99	70.279	Phascolarctos_cinereus
ENSDORG00000014298	Trmt1	87	65.979	ENSPFOG00000008527	trmt1	89	65.979	Poecilia_formosa
ENSDORG00000014298	Trmt1	87	65.636	ENSPLAG00000018788	trmt1	90	66.917	Poecilia_latipinna
ENSDORG00000014298	Trmt1	87	65.808	ENSPMEG00000013120	trmt1	89	65.808	Poecilia_mexicana
ENSDORG00000014298	Trmt1	86	65.499	ENSPREG00000000211	trmt1	85	65.499	Poecilia_reticulata
ENSDORG00000014298	Trmt1	98	85.736	ENSPPYG00000009622	TRMT1	99	85.106	Pongo_abelii
ENSDORG00000014298	Trmt1	99	75.420	ENSPCAG00000003698	TRMT1	99	75.420	Procavia_capensis
ENSDORG00000014298	Trmt1	99	83.792	ENSPCOG00000008653	TRMT1	99	83.792	Propithecus_coquereli
ENSDORG00000014298	Trmt1	99	82.012	ENSPVAG00000015076	TRMT1	99	82.012	Pteropus_vampyrus
ENSDORG00000014298	Trmt1	86	61.121	ENSPNYG00000013960	trmt1	92	61.121	Pundamilia_nyererei
ENSDORG00000014298	Trmt1	80	66.875	ENSPNAG00000024859	trmt1	88	66.875	Pygocentrus_nattereri
ENSDORG00000014298	Trmt1	96	81.388	ENSRNOG00000002914	Trmt1	99	81.388	Rattus_norvegicus
ENSDORG00000014298	Trmt1	99	83.866	ENSRBIG00000038324	TRMT1	99	83.866	Rhinopithecus_bieti
ENSDORG00000014298	Trmt1	92	66.885	ENSRBIG00000037505	-	97	66.613	Rhinopithecus_bieti
ENSDORG00000014298	Trmt1	99	83.714	ENSRROG00000028599	TRMT1	99	83.714	Rhinopithecus_roxellana
ENSDORG00000014298	Trmt1	92	66.230	ENSRROG00000031847	-	96	65.971	Rhinopithecus_roxellana
ENSDORG00000014298	Trmt1	78	35.337	YDR120C	-	94	35.753	Saccharomyces_cerevisiae
ENSDORG00000014298	Trmt1	99	79.745	ENSSBOG00000028861	TRMT1	98	83.306	Saimiri_boliviensis_boliviensis
ENSDORG00000014298	Trmt1	89	74.787	ENSSHAG00000014381	TRMT1	99	72.977	Sarcophilus_harrisii
ENSDORG00000014298	Trmt1	87	65.794	ENSSFOG00015004139	trmt1	84	65.794	Scleropages_formosus
ENSDORG00000014298	Trmt1	86	64.983	ENSSMAG00000021136	trmt1	85	64.983	Scophthalmus_maximus
ENSDORG00000014298	Trmt1	86	65.149	ENSSDUG00000012740	trmt1	84	65.149	Seriola_dumerili
ENSDORG00000014298	Trmt1	86	64.974	ENSSLDG00000005971	trmt1	84	64.974	Seriola_lalandi_dorsalis
ENSDORG00000014298	Trmt1	85	79.469	ENSSARG00000005138	TRMT1	99	79.469	Sorex_araneus
ENSDORG00000014298	Trmt1	88	51.624	ENSSPUG00000001084	TRMT1	91	51.966	Sphenodon_punctatus
ENSDORG00000014298	Trmt1	89	61.486	ENSSPAG00000007153	trmt1	97	61.486	Stegastes_partitus
ENSDORG00000014298	Trmt1	96	84.019	ENSSSCG00000013744	TRMT1	99	84.019	Sus_scrofa
ENSDORG00000014298	Trmt1	91	58.564	ENSTRUG00000010700	trmt1	91	58.564	Takifugu_rubripes
ENSDORG00000014298	Trmt1	86	64.161	ENSTNIG00000018808	trmt1	97	64.161	Tetraodon_nigroviridis
ENSDORG00000014298	Trmt1	98	79.412	ENSTTRG00000006379	TRMT1	99	79.116	Tursiops_truncatus
ENSDORG00000014298	Trmt1	99	80.923	ENSUAMG00000022911	TRMT1	99	80.923	Ursus_americanus
ENSDORG00000014298	Trmt1	95	82.456	ENSUMAG00000006027	TRMT1	98	82.456	Ursus_maritimus
ENSDORG00000014298	Trmt1	99	81.957	ENSVVUG00000024177	TRMT1	99	81.957	Vulpes_vulpes
ENSDORG00000014298	Trmt1	70	68.534	ENSXETG00000033863	TRMT1	92	68.534	Xenopus_tropicalis
ENSDORG00000014298	Trmt1	86	66.200	ENSXCOG00000015733	trmt1	88	66.200	Xiphophorus_couchianus
ENSDORG00000014298	Trmt1	86	65.909	ENSXMAG00000013823	trmt1	97	65.849	Xiphophorus_maculatus