EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDORG00000014807 (Gene tree)
Gene ID: -
Gene Symbol: Srl
Alias: 9830004M20Rik|sar|sarcalumenin
Full Name: sarcalumenin
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Plus strand
Length: 33114 bases
Position: chrKN672360.1:13800089-13833202
Accession: 105981873
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000013928	MMR_HSR1	PF01926.23	6.9e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000014806	-	1419	XM_013011220	ENSDORP00000013928	472 (aa)	XP_012866674	UPI000BACFB01

Gene Model

Click here to download ENSDORG00000014807's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000014807's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDORG00000014807	Srl	74	33.429	ENSDORG00000024162	Ehd3	67	33.333
ENSDORG00000014807	Srl	82	32.648	ENSDORG00000011700	Ehd2	68	32.812
ENSDORG00000014807	Srl	77	33.699	ENSDORG00000030186	Ehd1	67	33.699

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000014807	Srl	100	95.349	ENSG00000185739	SRL	100	96.984	Homo_sapiens
ENSDORG00000014807	Srl	94	76.018	ENSAPOG00000012432	SRL	98	74.887	Acanthochromis_polyacanthus
ENSDORG00000014807	Srl	100	81.144	ENSAPOG00000018093	srl	100	83.559	Acanthochromis_polyacanthus
ENSDORG00000014807	Srl	98	96.104	ENSAMEG00000010862	SRL	52	96.104	Ailuropoda_melanoleuca
ENSDORG00000014807	Srl	96	82.965	ENSACIG00000015799	srl	99	82.965	Amphilophus_citrinellus
ENSDORG00000014807	Srl	94	74.775	ENSACIG00000015419	SRL	99	74.775	Amphilophus_citrinellus
ENSDORG00000014807	Srl	97	73.913	ENSAOCG00000017049	SRL	99	74.342	Amphiprion_ocellaris
ENSDORG00000014807	Srl	92	84.332	ENSAOCG00000007574	srl	100	84.332	Amphiprion_ocellaris
ENSDORG00000014807	Srl	97	69.935	ENSAPEG00000006533	SRL	99	71.053	Amphiprion_percula
ENSDORG00000014807	Srl	100	81.356	ENSAPEG00000006911	srl	96	82.675	Amphiprion_percula
ENSDORG00000014807	Srl	100	81.144	ENSATEG00000024315	srl	97	82.857	Anabas_testudineus
ENSDORG00000014807	Srl	94	73.407	ENSATEG00000009643	SRL	52	72.967	Anabas_testudineus
ENSDORG00000014807	Srl	100	86.885	ENSACAG00000016380	SRL	86	89.530	Anolis_carolinensis
ENSDORG00000014807	Srl	98	82.151	ENSACLG00000027685	srl	98	83.111	Astatotilapia_calliptera
ENSDORG00000014807	Srl	94	72.747	ENSACLG00000024674	SRL	57	72.747	Astatotilapia_calliptera
ENSDORG00000014807	Srl	88	77.349	ENSAMXG00000038693	SRL	90	77.396	Astyanax_mexicanus
ENSDORG00000014807	Srl	99	80.467	ENSAMXG00000018789	srl	86	83.900	Astyanax_mexicanus
ENSDORG00000014807	Srl	96	96.247	ENSBTAG00000001078	SRL	57	96.247	Bos_taurus
ENSDORG00000014807	Srl	100	96.195	ENSCJAG00000019750	SRL	100	96.195	Callithrix_jacchus
ENSDORG00000014807	Srl	98	96.312	ENSCAFG00000019233	SRL	85	96.703	Canis_familiaris
ENSDORG00000014807	Srl	96	97.345	ENSCAFG00020025024	SRL	56	97.345	Canis_lupus_dingo
ENSDORG00000014807	Srl	99	95.054	ENSCHIG00000017927	SRL	57	95.824	Capra_hircus
ENSDORG00000014807	Srl	100	96.195	ENSTSYG00000007919	SRL	100	97.912	Carlito_syrichta
ENSDORG00000014807	Srl	100	97.246	ENSCPOG00000012643	SRL	100	97.246	Cavia_porcellus
ENSDORG00000014807	Srl	94	91.196	ENSCCAG00000032646	SRL	100	97.361	Cebus_capucinus
ENSDORG00000014807	Srl	100	95.560	ENSCATG00000032227	-	97	96.061	Cercocebus_atys
ENSDORG00000014807	Srl	100	97.034	ENSCLAG00000016242	SRL	100	97.034	Chinchilla_lanigera
ENSDORG00000014807	Srl	82	96.364	ENSCHOG00000001618	SRL	52	96.364	Choloepus_hoffmanni
ENSDORG00000014807	Srl	96	93.005	ENSCPBG00000026371	SRL	95	88.985	Chrysemys_picta_bellii
ENSDORG00000014807	Srl	91	59.397	ENSCING00000005231	-	91	60.837	Ciona_intestinalis
ENSDORG00000014807	Srl	100	95.560	ENSCANG00000035872	SRL	100	96.984	Colobus_angolensis_palliatus
ENSDORG00000014807	Srl	100	97.669	ENSCGRG00001016630	Srl	100	97.669	Cricetulus_griseus_chok1gshd
ENSDORG00000014807	Srl	100	97.669	ENSCGRG00000005458	Srl	100	97.669	Cricetulus_griseus_crigri
ENSDORG00000014807	Srl	100	81.356	ENSCSEG00000016151	srl	97	82.599	Cynoglossus_semilaevis
ENSDORG00000014807	Srl	99	70.021	ENSCSEG00000011866	SRL	92	71.711	Cynoglossus_semilaevis
ENSDORG00000014807	Srl	100	81.144	ENSCVAG00000003513	srl	96	83.937	Cyprinodon_variegatus
ENSDORG00000014807	Srl	96	73.866	ENSCVAG00000022465	SRL	61	73.060	Cyprinodon_variegatus
ENSDORG00000014807	Srl	100	82.030	ENSDARG00000104587	srl	97	83.921	Danio_rerio
ENSDORG00000014807	Srl	80	76.302	ENSDARG00000112959	CABZ01072309.1	90	82.558	Danio_rerio
ENSDORG00000014807	Srl	96	96.035	ENSDNOG00000011643	SRL	54	96.035	Dasypus_novemcinctus
ENSDORG00000014807	Srl	75	68.067	ENSEBUG00000015937	srl	88	67.816	Eptatretus_burgeri
ENSDORG00000014807	Srl	96	96.247	ENSEASG00005000942	SRL	55	96.247	Equus_asinus_asinus
ENSDORG00000014807	Srl	99	95.551	ENSECAG00000024219	SRL	95	96.452	Equus_caballus
ENSDORG00000014807	Srl	100	77.618	ENSELUG00000015616	srl	97	78.723	Esox_lucius
ENSDORG00000014807	Srl	100	94.292	ENSFCAG00000022075	SRL	96	96.460	Felis_catus
ENSDORG00000014807	Srl	96	89.845	ENSFALG00000004328	SRL	64	90.244	Ficedula_albicollis
ENSDORG00000014807	Srl	100	97.669	ENSFDAG00000006199	SRL	100	97.669	Fukomys_damarensis
ENSDORG00000014807	Srl	100	71.107	ENSFHEG00000011854	SRL	98	75.395	Fundulus_heteroclitus
ENSDORG00000014807	Srl	100	80.508	ENSFHEG00000011239	srl	97	82.159	Fundulus_heteroclitus
ENSDORG00000014807	Srl	93	80.795	ENSGMOG00000014954	srl	99	80.795	Gadus_morhua
ENSDORG00000014807	Srl	99	89.195	ENSGALG00000038884	SRL	96	90.110	Gallus_gallus
ENSDORG00000014807	Srl	100	80.508	ENSGAFG00000000010	srl	98	82.159	Gambusia_affinis
ENSDORG00000014807	Srl	94	76.923	ENSGAFG00000016984	SRL	98	76.471	Gambusia_affinis
ENSDORG00000014807	Srl	93	81.678	ENSGACG00000011332	srl	99	81.678	Gasterosteus_aculeatus
ENSDORG00000014807	Srl	100	95.137	ENSGGOG00000011312	-	97	96.061	Gorilla_gorilla
ENSDORG00000014807	Srl	94	72.527	ENSHBUG00000015710	SRL	57	72.527	Haplochromis_burtoni
ENSDORG00000014807	Srl	98	82.151	ENSHBUG00000007581	srl	98	83.111	Haplochromis_burtoni
ENSDORG00000014807	Srl	100	97.881	ENSHGLG00000015271	SRL	100	97.881	Heterocephalus_glaber_female
ENSDORG00000014807	Srl	100	97.881	ENSHGLG00100019378	SRL	100	97.881	Heterocephalus_glaber_male
ENSDORG00000014807	Srl	94	72.848	ENSHCOG00000001012	SRL	50	71.744	Hippocampus_comes
ENSDORG00000014807	Srl	99	80.213	ENSHCOG00000008687	srl	98	83.258	Hippocampus_comes
ENSDORG00000014807	Srl	92	70.183	ENSIPUG00000011609	SRL	95	69.037	Ictalurus_punctatus
ENSDORG00000014807	Srl	100	79.873	ENSIPUG00000012513	srl	97	80.921	Ictalurus_punctatus
ENSDORG00000014807	Srl	100	97.034	ENSSTOG00000021151	-	100	97.034	Ictidomys_tridecemlineatus
ENSDORG00000014807	Srl	100	97.458	ENSJJAG00000016400	Srl	100	97.458	Jaculus_jaculus
ENSDORG00000014807	Srl	98	81.169	ENSKMAG00000014115	srl	93	85.273	Kryptolebias_marmoratus
ENSDORG00000014807	Srl	93	75.964	ENSKMAG00000019537	SRL	100	75.964	Kryptolebias_marmoratus
ENSDORG00000014807	Srl	96	74.123	ENSLBEG00000013811	SRL	98	74.123	Labrus_bergylta
ENSDORG00000014807	Srl	100	81.144	ENSLBEG00000026643	srl	96	82.561	Labrus_bergylta
ENSDORG00000014807	Srl	96	85.841	ENSLACG00000002825	SRL	99	85.841	Latimeria_chalumnae
ENSDORG00000014807	Srl	99	83.156	ENSLOCG00000002644	srl	96	84.956	Lepisosteus_oculatus
ENSDORG00000014807	Srl	96	96.018	ENSLAFG00000006329	SRL	51	96.018	Loxodonta_africana
ENSDORG00000014807	Srl	91	96.984	ENSMFAG00000037383	SRL	100	96.984	Macaca_fascicularis
ENSDORG00000014807	Srl	98	95.445	ENSMNEG00000019236	-	97	95.445	Macaca_nemestrina
ENSDORG00000014807	Srl	100	87.738	ENSMLEG00000032156	SRL	96	87.965	Mandrillus_leucophaeus
ENSDORG00000014807	Srl	93	73.348	ENSMAMG00000013756	SRL	53	73.568	Mastacembelus_armatus
ENSDORG00000014807	Srl	99	80.000	ENSMAMG00000023322	srl	94	83.937	Mastacembelus_armatus
ENSDORG00000014807	Srl	94	72.747	ENSMZEG00005004010	SRL	57	72.747	Maylandia_zebra
ENSDORG00000014807	Srl	98	82.151	ENSMZEG00005004548	srl	98	83.111	Maylandia_zebra
ENSDORG00000014807	Srl	96	89.890	ENSMGAG00000009342	SRL	95	92.021	Meleagris_gallopavo
ENSDORG00000014807	Srl	96	96.018	ENSMICG00000032307	SRL	97	95.624	Microcebus_murinus
ENSDORG00000014807	Srl	100	97.669	ENSMOCG00000008208	Srl	100	97.669	Microtus_ochrogaster
ENSDORG00000014807	Srl	94	83.710	ENSMMOG00000013970	srl	98	83.710	Mola_mola
ENSDORG00000014807	Srl	93	72.807	ENSMMOG00000021572	SRL	99	71.711	Mola_mola
ENSDORG00000014807	Srl	96	95.585	ENSMODG00000016380	-	51	95.585	Monodelphis_domestica
ENSDORG00000014807	Srl	89	75.656	ENSMALG00000000670	SRL	98	74.463	Monopterus_albus
ENSDORG00000014807	Srl	96	81.718	ENSMALG00000005039	srl	98	83.032	Monopterus_albus
ENSDORG00000014807	Srl	100	97.881	MGP_CAROLIEiJ_G0020400	Srl	100	97.881	Mus_caroli
ENSDORG00000014807	Srl	100	97.881	ENSMUSG00000022519	Srl	100	97.881	Mus_musculus
ENSDORG00000014807	Srl	100	97.881	MGP_SPRETEiJ_G0021294	Srl	100	97.881	Mus_spretus
ENSDORG00000014807	Srl	96	97.124	ENSMPUG00000015025	SRL	55	97.124	Mustela_putorius_furo
ENSDORG00000014807	Srl	98	96.312	ENSMLUG00000030733	SRL	57	97.788	Myotis_lucifugus
ENSDORG00000014807	Srl	100	97.669	ENSNGAG00000019741	Srl	100	97.669	Nannospalax_galili
ENSDORG00000014807	Srl	98	82.151	ENSNBRG00000023775	srl	97	82.456	Neolamprologus_brichardi
ENSDORG00000014807	Srl	94	72.747	ENSNBRG00000002422	SRL	60	70.410	Neolamprologus_brichardi
ENSDORG00000014807	Srl	100	88.795	ENSNLEG00000029051	SRL	96	89.278	Nomascus_leucogenys
ENSDORG00000014807	Srl	97	90.217	ENSOPRG00000000477	-	53	90.969	Ochotona_princeps
ENSDORG00000014807	Srl	100	97.034	ENSODEG00000013256	SRL	100	97.034	Octodon_degus
ENSDORG00000014807	Srl	97	82.353	ENSONIG00000005192	srl	96	82.237	Oreochromis_niloticus
ENSDORG00000014807	Srl	97	95.652	ENSOCUG00000025140	SRL	50	96.272	Oryctolagus_cuniculus
ENSDORG00000014807	Srl	94	74.324	ENSORLG00000015064	SRL	98	74.165	Oryzias_latipes
ENSDORG00000014807	Srl	100	80.085	ENSORLG00000008291	srl	92	84.794	Oryzias_latipes
ENSDORG00000014807	Srl	94	74.550	ENSORLG00020018173	SRL	98	74.388	Oryzias_latipes_hni
ENSDORG00000014807	Srl	100	80.297	ENSORLG00020019784	srl	79	85.052	Oryzias_latipes_hni
ENSDORG00000014807	Srl	94	74.775	ENSORLG00015019063	SRL	97	74.775	Oryzias_latipes_hsok
ENSDORG00000014807	Srl	100	79.873	ENSORLG00015009342	srl	93	81.498	Oryzias_latipes_hsok
ENSDORG00000014807	Srl	94	72.867	ENSOMEG00000005682	SRL	53	72.867	Oryzias_melastigma
ENSDORG00000014807	Srl	100	80.085	ENSOMEG00000010006	srl	98	82.955	Oryzias_melastigma
ENSDORG00000014807	Srl	97	96.053	ENSOGAG00000029266	SRL	56	96.053	Otolemur_garnettii
ENSDORG00000014807	Srl	99	95.054	ENSOARG00000003074	SRL	57	96.452	Ovis_aries
ENSDORG00000014807	Srl	97	95.852	ENSPPAG00000024919	-	100	96.984	Pan_paniscus
ENSDORG00000014807	Srl	100	94.503	ENSPPRG00000010274	SRL	100	97.216	Panthera_pardus
ENSDORG00000014807	Srl	100	94.503	ENSPTIG00000015162	SRL	100	97.216	Panthera_tigris_altaica
ENSDORG00000014807	Srl	100	95.349	ENSPTRG00000007712	SRL	100	96.984	Pan_troglodytes
ENSDORG00000014807	Srl	98	95.662	ENSPANG00000013804	SRL	99	95.662	Papio_anubis
ENSDORG00000014807	Srl	100	80.973	ENSPKIG00000006405	srl	93	84.389	Paramormyrops_kingsleyae
ENSDORG00000014807	Srl	100	74.153	ENSPKIG00000024974	SRL	88	76.697	Paramormyrops_kingsleyae
ENSDORG00000014807	Srl	96	90.287	ENSPSIG00000008586	SRL	51	90.287	Pelodiscus_sinensis
ENSDORG00000014807	Srl	94	73.077	ENSPMGG00000023505	-	99	72.135	Periophthalmus_magnuspinnatus
ENSDORG00000014807	Srl	98	81.385	ENSPMGG00000021081	srl	97	82.781	Periophthalmus_magnuspinnatus
ENSDORG00000014807	Srl	100	97.881	ENSPEMG00000015842	Srl	100	97.881	Peromyscus_maniculatus_bairdii
ENSDORG00000014807	Srl	89	68.578	ENSPMAG00000004786	srl	99	68.578	Petromyzon_marinus
ENSDORG00000014807	Srl	96	95.344	ENSPCIG00000012128	SRL	98	95.344	Phascolarctos_cinereus
ENSDORG00000014807	Srl	100	78.926	ENSPFOG00000011408	srl	96	80.258	Poecilia_formosa
ENSDORG00000014807	Srl	97	81.917	ENSPLAG00000008017	srl	98	82.743	Poecilia_latipinna
ENSDORG00000014807	Srl	94	76.244	ENSPLAG00000002932	SRL	98	75.113	Poecilia_latipinna
ENSDORG00000014807	Srl	94	73.961	ENSPMEG00000005890	SRL	59	72.867	Poecilia_mexicana
ENSDORG00000014807	Srl	100	80.720	ENSPMEG00000006745	srl	98	82.743	Poecilia_mexicana
ENSDORG00000014807	Srl	94	77.149	ENSPREG00000000315	SRL	98	76.018	Poecilia_reticulata
ENSDORG00000014807	Srl	100	80.297	ENSPREG00000007751	srl	99	83.146	Poecilia_reticulata
ENSDORG00000014807	Srl	89	97.136	ENSPPYG00000007053	SRL	98	97.136	Pongo_abelii
ENSDORG00000014807	Srl	96	94.505	ENSPCAG00000003378	-	51	94.505	Procavia_capensis
ENSDORG00000014807	Srl	97	95.633	ENSPCOG00000023135	SRL	100	97.216	Propithecus_coquereli
ENSDORG00000014807	Srl	96	97.788	ENSPVAG00000006586	SRL	56	97.788	Pteropus_vampyrus
ENSDORG00000014807	Srl	98	82.151	ENSPNYG00000001200	srl	98	83.111	Pundamilia_nyererei
ENSDORG00000014807	Srl	94	72.747	ENSPNYG00000003423	SRL	57	72.747	Pundamilia_nyererei
ENSDORG00000014807	Srl	100	79.237	ENSPNAG00000023106	srl	94	82.353	Pygocentrus_nattereri
ENSDORG00000014807	Srl	97	73.377	ENSPNAG00000007361	-	93	73.568	Pygocentrus_nattereri
ENSDORG00000014807	Srl	97	97.380	ENSRNOG00000005269	Srl	51	97.380	Rattus_norvegicus
ENSDORG00000014807	Srl	97	95.217	ENSRBIG00000042358	SRL	51	95.833	Rhinopithecus_bieti
ENSDORG00000014807	Srl	100	96.195	ENSSBOG00000029273	SRL	100	96.195	Saimiri_boliviensis_boliviensis
ENSDORG00000014807	Srl	97	94.956	ENSSHAG00000011715	-	51	95.787	Sarcophilus_harrisii
ENSDORG00000014807	Srl	94	76.923	ENSSFOG00015021327	SRL	51	75.328	Scleropages_formosus
ENSDORG00000014807	Srl	100	78.926	ENSSFOG00015009773	srl	97	82.675	Scleropages_formosus
ENSDORG00000014807	Srl	100	80.761	ENSSMAG00000016274	srl	99	82.237	Scophthalmus_maximus
ENSDORG00000014807	Srl	93	72.867	ENSSMAG00000002232	SRL	50	72.088	Scophthalmus_maximus
ENSDORG00000014807	Srl	94	74.833	ENSSDUG00000009161	SRL	98	74.833	Seriola_dumerili
ENSDORG00000014807	Srl	94	84.389	ENSSDUG00000010808	srl	97	84.389	Seriola_dumerili
ENSDORG00000014807	Srl	96	83.040	ENSSLDG00000022024	srl	97	83.040	Seriola_lalandi_dorsalis
ENSDORG00000014807	Srl	94	74.398	ENSSLDG00000014601	SRL	99	74.725	Seriola_lalandi_dorsalis
ENSDORG00000014807	Srl	96	90.487	ENSSPUG00000016859	SRL	99	90.487	Sphenodon_punctatus
ENSDORG00000014807	Srl	93	75.964	ENSSPAG00000014254	SRL	98	74.830	Stegastes_partitus
ENSDORG00000014807	Srl	100	81.568	ENSSPAG00000019105	srl	97	83.114	Stegastes_partitus
ENSDORG00000014807	Srl	96	95.824	ENSSSCG00000007949	SRL	99	96.205	Sus_scrofa
ENSDORG00000014807	Srl	96	89.451	ENSTGUG00000003951	-	99	89.451	Taeniopygia_guttata
ENSDORG00000014807	Srl	77	91.713	ENSTGUG00000016121	-	96	92.529	Taeniopygia_guttata
ENSDORG00000014807	Srl	100	81.144	ENSTRUG00000006005	srl	97	82.379	Takifugu_rubripes
ENSDORG00000014807	Srl	89	75.895	ENSTRUG00000013310	SRL	55	75.179	Takifugu_rubripes
ENSDORG00000014807	Srl	96	82.159	ENSTNIG00000009739	srl	97	82.159	Tetraodon_nigroviridis
ENSDORG00000014807	Srl	96	97.124	ENSUAMG00000005701	SRL	56	97.124	Ursus_americanus
ENSDORG00000014807	Srl	96	97.345	ENSUMAG00000002574	SRL	56	97.345	Ursus_maritimus
ENSDORG00000014807	Srl	96	97.137	ENSVVUG00000016331	-	50	97.137	Vulpes_vulpes
ENSDORG00000014807	Srl	96	88.717	ENSXETG00000017313	srl	100	88.717	Xenopus_tropicalis
ENSDORG00000014807	Srl	96	75.388	ENSXCOG00000014584	SRL	100	74.945	Xiphophorus_couchianus
ENSDORG00000014807	Srl	89	84.798	ENSXCOG00000010424	srl	97	84.798	Xiphophorus_couchianus
ENSDORG00000014807	Srl	100	80.508	ENSXMAG00000004625	srl	92	82.379	Xiphophorus_maculatus
ENSDORG00000014807	Srl	97	72.979	ENSXMAG00000027598	SRL	62	74.286	Xiphophorus_maculatus