EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDORG00000014832 (Gene tree)
Gene ID: 105987248
Gene Symbol: Smarca2
Alias: -
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 2
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Plus strand
Length: 171243 bases
Position: chrKN672386.1:12323620-12494862
Accession: 105987248
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000017837	ResIII	PF04851.15	1.8e-08	1	1
ENSDORP00000027417	ResIII	PF04851.15	1.8e-08	1	1
ENSDORP00000027699	ResIII	PF04851.15	1.8e-08	1	1
ENSDORP00000013957	ResIII	PF04851.15	1.8e-08	1	1
ENSDORP00000027699	BRK	PF07533.16	2e-17	1	1
ENSDORP00000013957	BRK	PF07533.16	2e-17	1	1
ENSDORP00000017837	BRK	PF07533.16	2e-17	1	1
ENSDORP00000027417	BRK	PF07533.16	2e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000026950	-	204	-	ENSDORP00000025188	68 (aa)	-	UPI0007699FBA
ENSDORT00000029642	-	4749	-	ENSDORP00000027699	1582 (aa)	-	UPI000BAD06A2
ENSDORT00000031607	-	783	-	ENSDORP00000017004	260 (aa)	-	UPI000BAD0A07
ENSDORT00000033354	-	5722	XM_013018453	ENSDORP00000027417	1571 (aa)	XP_012873907	A0A1S3FD62
ENSDORT00000030572	-	1782	XM_013018454	ENSDORP00000019777	276 (aa)	XP_012873908	A0A1S3FB96
ENSDORT00000014836	-	4770	XM_013018450	ENSDORP00000013957	1589 (aa)	XP_012873904	A0A1S3FCB6
ENSDORT00000025889	-	4713	-	ENSDORP00000017837	1570 (aa)	-	UPI000BAD0483
ENSDORT00000023360	-	837	-	ENSDORP00000027845	278 (aa)	-	UPI000BAD2827

Gene Model

Click here to download ENSDORG00000014832's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000014832's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDORG00000014832	Smarca2	76	78.506	ENSDORG00000002544	Smarca4	88	71.289

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000014832	Smarca2	100	97.550	ENSG00000080503	SMARCA2	100	99.408	Homo_sapiens
ENSDORG00000014832	Smarca2	100	80.465	ENSAPOG00000002641	SMARCA2	97	80.090	Acanthochromis_polyacanthus
ENSDORG00000014832	Smarca2	80	99.296	ENSAMEG00000012325	SMARCA2	100	99.296	Ailuropoda_melanoleuca
ENSDORG00000014832	Smarca2	100	79.737	ENSACIG00000015607	SMARCA2	97	79.537	Amphilophus_citrinellus
ENSDORG00000014832	Smarca2	100	80.427	ENSAOCG00000009647	-	97	79.923	Amphiprion_ocellaris
ENSDORG00000014832	Smarca2	100	80.590	ENSAPEG00000007646	SMARCA2	97	80.155	Amphiprion_percula
ENSDORG00000014832	Smarca2	99	80.686	ENSATEG00000006916	SMARCA2	96	80.857	Anabas_testudineus
ENSDORG00000014832	Smarca2	90	88.920	ENSAPLG00000013873	SMARCA2	94	89.106	Anas_platyrhynchos
ENSDORG00000014832	Smarca2	100	90.140	ENSACAG00000002423	SMARCA2	100	89.313	Anolis_carolinensis
ENSDORG00000014832	Smarca2	100	97.546	ENSANAG00000026498	SMARCA2	100	97.546	Aotus_nancymaae
ENSDORG00000014832	Smarca2	100	80.721	ENSACLG00000004248	SMARCA2	97	80.869	Astatotilapia_calliptera
ENSDORG00000014832	Smarca2	100	82.224	ENSAMXG00000012404	smarca2	97	82.510	Astyanax_mexicanus
ENSDORG00000014832	Smarca2	100	96.754	ENSBTAG00000007494	SMARCA2	100	96.754	Bos_taurus
ENSDORG00000014832	Smarca2	99	97.694	ENSCJAG00000010710	SMARCA2	99	97.432	Callithrix_jacchus
ENSDORG00000014832	Smarca2	100	97.008	ENSCAFG00000002013	SMARCA2	100	97.008	Canis_familiaris
ENSDORG00000014832	Smarca2	77	94.577	ENSCAFG00020026802	SMARCA2	98	94.577	Canis_lupus_dingo
ENSDORG00000014832	Smarca2	100	96.790	ENSCHIG00000025863	SMARCA2	100	96.790	Capra_hircus
ENSDORG00000014832	Smarca2	100	96.698	ENSTSYG00000003858	SMARCA2	100	96.738	Carlito_syrichta
ENSDORG00000014832	Smarca2	99	92.916	ENSCAPG00000002890	SMARCA2	100	93.156	Cavia_aperea
ENSDORG00000014832	Smarca2	100	97.072	ENSCPOG00000005475	SMARCA2	100	97.072	Cavia_porcellus
ENSDORG00000014832	Smarca2	100	97.645	ENSCCAG00000030636	SMARCA2	100	97.645	Cebus_capucinus
ENSDORG00000014832	Smarca2	100	97.266	ENSCATG00000031470	SMARCA2	100	97.266	Cercocebus_atys
ENSDORG00000014832	Smarca2	100	97.208	ENSCLAG00000014484	SMARCA2	100	97.208	Chinchilla_lanigera
ENSDORG00000014832	Smarca2	94	97.209	ENSCSAG00000008650	SMARCA2	99	97.209	Chlorocebus_sabaeus
ENSDORG00000014832	Smarca2	87	91.438	ENSCHOG00000004316	SMARCA2	87	91.438	Choloepus_hoffmanni
ENSDORG00000014832	Smarca2	100	91.492	ENSCPBG00000025463	SMARCA2	100	91.545	Chrysemys_picta_bellii
ENSDORG00000014832	Smarca2	100	97.671	ENSCANG00000039597	SMARCA2	100	97.671	Colobus_angolensis_palliatus
ENSDORG00000014832	Smarca2	100	89.692	ENSCGRG00001002323	Smarca2	100	89.586	Cricetulus_griseus_chok1gshd
ENSDORG00000014832	Smarca2	99	77.636	ENSCSEG00000019311	SMARCA2	97	77.785	Cynoglossus_semilaevis
ENSDORG00000014832	Smarca2	84	80.089	ENSCVAG00000016571	SMARCA2	95	79.785	Cyprinodon_variegatus
ENSDORG00000014832	Smarca2	100	81.875	ENSDARG00000008904	smarca2	97	81.983	Danio_rerio
ENSDORG00000014832	Smarca2	100	95.006	ENSDNOG00000006402	SMARCA2	100	94.651	Dasypus_novemcinctus
ENSDORG00000014832	Smarca2	81	58.555	FBgn0000212	brm	71	62.848	Drosophila_melanogaster
ENSDORG00000014832	Smarca2	95	70.185	ENSEBUG00000011442	-	97	69.800	Eptatretus_burgeri
ENSDORG00000014832	Smarca2	87	61.642	ENSEBUG00000002449	-	84	68.588	Eptatretus_burgeri
ENSDORG00000014832	Smarca2	100	96.756	ENSEASG00005010312	SMARCA2	100	96.756	Equus_asinus_asinus
ENSDORG00000014832	Smarca2	67	97.222	ENSEEUG00000015540	-	69	97.222	Erinaceus_europaeus
ENSDORG00000014832	Smarca2	93	79.559	ENSELUG00000010318	smarca2	96	78.874	Esox_lucius
ENSDORG00000014832	Smarca2	100	96.565	ENSFCAG00000001568	SMARCA2	100	96.565	Felis_catus
ENSDORG00000014832	Smarca2	100	91.698	ENSFALG00000010416	SMARCA2	100	91.923	Ficedula_albicollis
ENSDORG00000014832	Smarca2	99	95.921	ENSFDAG00000010502	SMARCA2	99	95.823	Fukomys_damarensis
ENSDORG00000014832	Smarca2	100	80.575	ENSFHEG00000021250	SMARCA2	97	80.319	Fundulus_heteroclitus
ENSDORG00000014832	Smarca2	98	78.072	ENSGMOG00000014229	SMARCA2	81	84.353	Gadus_morhua
ENSDORG00000014832	Smarca2	100	92.386	ENSGALG00000010164	SMARCA2	100	91.481	Gallus_gallus
ENSDORG00000014832	Smarca2	95	76.580	ENSGAFG00000001164	SMARCA2	93	76.828	Gambusia_affinis
ENSDORG00000014832	Smarca2	99	79.618	ENSGACG00000014488	SMARCA2	97	79.053	Gasterosteus_aculeatus
ENSDORG00000014832	Smarca2	100	91.318	ENSGAGG00000024412	SMARCA2	100	91.545	Gopherus_agassizii
ENSDORG00000014832	Smarca2	95	99.593	ENSGGOG00000000513	SMARCA2	100	97.272	Gorilla_gorilla
ENSDORG00000014832	Smarca2	100	80.188	ENSHBUG00000006691	SMARCA2	97	79.987	Haplochromis_burtoni
ENSDORG00000014832	Smarca2	99	96.741	ENSHGLG00000005215	SMARCA2	99	96.741	Heterocephalus_glaber_female
ENSDORG00000014832	Smarca2	100	96.308	ENSHGLG00100010496	SMARCA2	100	96.308	Heterocephalus_glaber_male
ENSDORG00000014832	Smarca2	89	75.053	ENSHCOG00000015348	-	88	86.634	Hippocampus_comes
ENSDORG00000014832	Smarca2	100	81.285	ENSIPUG00000011060	smarca2	97	81.936	Ictalurus_punctatus
ENSDORG00000014832	Smarca2	100	97.552	ENSSTOG00000006812	SMARCA2	100	97.552	Ictidomys_tridecemlineatus
ENSDORG00000014832	Smarca2	100	97.840	ENSJJAG00000010867	Smarca2	100	97.840	Jaculus_jaculus
ENSDORG00000014832	Smarca2	100	80.062	ENSKMAG00000015844	-	98	79.732	Kryptolebias_marmoratus
ENSDORG00000014832	Smarca2	98	83.877	ENSLOCG00000011499	smarca2	83	87.840	Lepisosteus_oculatus
ENSDORG00000014832	Smarca2	100	94.578	ENSLAFG00000014061	SMARCA2	83	97.639	Loxodonta_africana
ENSDORG00000014832	Smarca2	100	96.352	ENSMFAG00000003814	SMARCA2	100	96.352	Macaca_fascicularis
ENSDORG00000014832	Smarca2	100	97.736	ENSMMUG00000015279	SMARCA2	100	97.736	Macaca_mulatta
ENSDORG00000014832	Smarca2	100	97.362	ENSMNEG00000041069	SMARCA2	100	97.362	Macaca_nemestrina
ENSDORG00000014832	Smarca2	100	95.406	ENSMLEG00000027418	SMARCA2	100	95.406	Mandrillus_leucophaeus
ENSDORG00000014832	Smarca2	100	80.721	ENSMAMG00000003056	SMARCA2	97	81.885	Mastacembelus_armatus
ENSDORG00000014832	Smarca2	100	80.402	ENSMZEG00005020709	SMARCA2	96	80.993	Maylandia_zebra
ENSDORG00000014832	Smarca2	77	77.689	ENSMGAG00000005160	-	100	76.627	Meleagris_gallopavo
ENSDORG00000014832	Smarca2	100	97.294	ENSMICG00000005162	SMARCA2	100	97.294	Microcebus_murinus
ENSDORG00000014832	Smarca2	100	96.949	ENSMOCG00000001611	Smarca2	100	96.949	Microtus_ochrogaster
ENSDORG00000014832	Smarca2	99	79.153	ENSMMOG00000014196	SMARCA2	97	78.954	Mola_mola
ENSDORG00000014832	Smarca2	100	92.082	ENSMODG00000003578	SMARCA2	100	91.771	Monodelphis_domestica
ENSDORG00000014832	Smarca2	99	81.053	ENSMALG00000009611	SMARCA2	97	80.641	Monopterus_albus
ENSDORG00000014832	Smarca2	100	96.567	MGP_CAROLIEiJ_G0022841	Smarca2	100	96.567	Mus_caroli
ENSDORG00000014832	Smarca2	100	96.273	ENSMUSG00000024921	Smarca2	99	99.441	Mus_musculus
ENSDORG00000014832	Smarca2	100	96.833	MGP_PahariEiJ_G0014334	Smarca2	100	96.833	Mus_pahari
ENSDORG00000014832	Smarca2	100	96.275	MGP_SPRETEiJ_G0023759	Smarca2	99	100.000	Mus_spretus
ENSDORG00000014832	Smarca2	81	99.219	ENSMPUG00000005171	SMARCA2	94	99.219	Mustela_putorius_furo
ENSDORG00000014832	Smarca2	99	90.761	ENSMLUG00000002342	SMARCA2	82	93.688	Myotis_lucifugus
ENSDORG00000014832	Smarca2	99	96.521	ENSNGAG00000000108	Smarca2	99	96.521	Nannospalax_galili
ENSDORG00000014832	Smarca2	95	67.808	ENSNBRG00000017998	SMARCA2	94	83.085	Neolamprologus_brichardi
ENSDORG00000014832	Smarca2	100	94.526	ENSNLEG00000008575	SMARCA2	100	94.526	Nomascus_leucogenys
ENSDORG00000014832	Smarca2	100	85.400	ENSMEUG00000009812	SMARCA2	100	85.085	Notamacropus_eugenii
ENSDORG00000014832	Smarca2	100	90.748	ENSOPRG00000013474	SMARCA2	100	90.944	Ochotona_princeps
ENSDORG00000014832	Smarca2	99	96.426	ENSODEG00000005452	SMARCA2	99	96.426	Octodon_degus
ENSDORG00000014832	Smarca2	99	80.517	ENSONIG00000014163	SMARCA2	97	79.683	Oreochromis_niloticus
ENSDORG00000014832	Smarca2	100	96.266	ENSOCUG00000006320	SMARCA2	100	96.329	Oryctolagus_cuniculus
ENSDORG00000014832	Smarca2	100	80.100	ENSORLG00000020820	SMARCA2	97	79.015	Oryzias_latipes
ENSDORG00000014832	Smarca2	100	80.100	ENSORLG00015006289	SMARCA2	97	79.015	Oryzias_latipes_hsok
ENSDORG00000014832	Smarca2	99	80.715	ENSOMEG00000009736	-	97	79.883	Oryzias_melastigma
ENSDORG00000014832	Smarca2	99	92.942	ENSOGAG00000017053	SMARCA2	99	93.691	Otolemur_garnettii
ENSDORG00000014832	Smarca2	100	95.359	ENSOARG00000013265	SMARCA2	100	95.359	Ovis_aries
ENSDORG00000014832	Smarca2	100	93.329	ENSPPAG00000038717	SMARCA2	100	94.044	Pan_paniscus
ENSDORG00000014832	Smarca2	100	96.628	ENSPPRG00000001879	SMARCA2	100	96.628	Panthera_pardus
ENSDORG00000014832	Smarca2	100	96.050	ENSPTRG00000051168	SMARCA2	100	95.417	Pan_troglodytes
ENSDORG00000014832	Smarca2	100	90.521	ENSPANG00000025121	SMARCA2	100	90.772	Papio_anubis
ENSDORG00000014832	Smarca2	100	82.995	ENSPKIG00000018469	-	97	82.507	Paramormyrops_kingsleyae
ENSDORG00000014832	Smarca2	100	90.777	ENSPSIG00000006284	SMARCA2	100	90.673	Pelodiscus_sinensis
ENSDORG00000014832	Smarca2	99	74.144	ENSPMGG00000013696	-	97	74.465	Periophthalmus_magnuspinnatus
ENSDORG00000014832	Smarca2	100	96.545	ENSPEMG00000019821	Smarca2	100	96.545	Peromyscus_maniculatus_bairdii
ENSDORG00000014832	Smarca2	95	72.431	ENSPMAG00000005337	-	80	76.744	Petromyzon_marinus
ENSDORG00000014832	Smarca2	100	93.635	ENSPCIG00000015658	SMARCA2	100	93.316	Phascolarctos_cinereus
ENSDORG00000014832	Smarca2	100	79.713	ENSPFOG00000001856	SMARCA2	97	79.244	Poecilia_formosa
ENSDORG00000014832	Smarca2	99	79.849	ENSPLAG00000017829	SMARCA2	81	82.312	Poecilia_latipinna
ENSDORG00000014832	Smarca2	99	79.899	ENSPMEG00000001815	-	97	77.052	Poecilia_mexicana
ENSDORG00000014832	Smarca2	100	79.516	ENSPREG00000013800	SMARCA2	96	77.821	Poecilia_reticulata
ENSDORG00000014832	Smarca2	100	97.072	ENSPPYG00000019258	SMARCA2	100	97.072	Pongo_abelii
ENSDORG00000014832	Smarca2	76	84.791	ENSPCAG00000016969	SMARCA2	78	85.294	Procavia_capensis
ENSDORG00000014832	Smarca2	100	95.283	ENSPCOG00000025709	SMARCA2	100	95.283	Propithecus_coquereli
ENSDORG00000014832	Smarca2	91	99.474	ENSPVAG00000000901	SMARCA2	95	99.474	Pteropus_vampyrus
ENSDORG00000014832	Smarca2	100	77.102	ENSPNYG00000004533	SMARCA2	97	76.824	Pundamilia_nyererei
ENSDORG00000014832	Smarca2	99	83.472	ENSPNAG00000014635	smarca2	96	83.149	Pygocentrus_nattereri
ENSDORG00000014832	Smarca2	100	96.619	ENSRNOG00000011931	Smarca2	100	96.619	Rattus_norvegicus
ENSDORG00000014832	Smarca2	100	95.544	ENSRBIG00000038618	SMARCA2	100	95.544	Rhinopithecus_bieti
ENSDORG00000014832	Smarca2	100	96.539	ENSRROG00000019271	SMARCA2	100	96.539	Rhinopithecus_roxellana
ENSDORG00000014832	Smarca2	100	93.455	ENSSBOG00000034827	SMARCA2	100	93.707	Saimiri_boliviensis_boliviensis
ENSDORG00000014832	Smarca2	100	91.459	ENSSHAG00000007884	SMARCA2	100	91.708	Sarcophilus_harrisii
ENSDORG00000014832	Smarca2	91	83.485	ENSSFOG00015014870	SMARCA2	94	85.063	Scleropages_formosus
ENSDORG00000014832	Smarca2	100	80.489	ENSSMAG00000013707	SMARCA2	97	80.167	Scophthalmus_maximus
ENSDORG00000014832	Smarca2	99	80.548	ENSSDUG00000008852	-	98	79.637	Seriola_dumerili
ENSDORG00000014832	Smarca2	99	80.676	ENSSLDG00000025449	SMARCA2	97	80.117	Seriola_lalandi_dorsalis
ENSDORG00000014832	Smarca2	95	97.895	ENSSARG00000007888	SMARCA2	95	97.895	Sorex_araneus
ENSDORG00000014832	Smarca2	95	87.667	ENSSPUG00000001629	SMARCA2	98	85.752	Sphenodon_punctatus
ENSDORG00000014832	Smarca2	100	80.451	ENSSPAG00000020091	-	97	79.884	Stegastes_partitus
ENSDORG00000014832	Smarca2	100	96.413	ENSSSCG00000005232	SMARCA2	100	96.413	Sus_scrofa
ENSDORG00000014832	Smarca2	98	91.471	ENSTGUG00000005460	SMARCA2	98	91.069	Taeniopygia_guttata
ENSDORG00000014832	Smarca2	99	79.596	ENSTRUG00000015619	SMARCA2	97	78.971	Takifugu_rubripes
ENSDORG00000014832	Smarca2	67	100.000	ENSTBEG00000008767	SMARCA2	74	100.000	Tupaia_belangeri
ENSDORG00000014832	Smarca2	95	95.687	ENSTTRG00000002033	SMARCA2	95	95.554	Tursiops_truncatus
ENSDORG00000014832	Smarca2	89	94.206	ENSUAMG00000024701	SMARCA2	99	94.353	Ursus_americanus
ENSDORG00000014832	Smarca2	92	87.569	ENSVPAG00000001204	SMARCA2	100	87.569	Vicugna_pacos
ENSDORG00000014832	Smarca2	76	95.580	ENSVVUG00000004598	SMARCA2	99	95.580	Vulpes_vulpes
ENSDORG00000014832	Smarca2	100	83.002	ENSXETG00000015299	smarca2	82	87.245	Xenopus_tropicalis
ENSDORG00000014832	Smarca2	89	79.605	ENSXCOG00000011073	SMARCA2	97	80.058	Xiphophorus_couchianus
ENSDORG00000014832	Smarca2	100	79.244	ENSXMAG00000015611	SMARCA2	97	78.662	Xiphophorus_maculatus