EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSDORG00000015081 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: PR/SET domain 4
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Plus strand
Length: 20052 bases
Position: chrKN672425.1:7519277-7539328
Accession: 105992019
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000014197	zf-C2H2	PF00096.26	3e-22	1	3
ENSDORP00000014197	zf-C2H2	PF00096.26	3e-22	2	3
ENSDORP00000014197	zf-C2H2	PF00096.26	3e-22	3	3
ENSDORP00000016675	zf-C2H2	PF00096.26	4.2e-22	1	3
ENSDORP00000016675	zf-C2H2	PF00096.26	4.2e-22	2	3
ENSDORP00000016675	zf-C2H2	PF00096.26	4.2e-22	3	3
ENSDORP00000014197	zf-met	PF12874.7	2.1e-05	1	1
ENSDORP00000016675	zf-met	PF12874.7	3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000026684	-	2208	-	ENSDORP00000016675	735 (aa)	-	UPI000BACFAD1
ENSDORT00000015081	-	2103	XM_013024815	ENSDORP00000014197	700 (aa)	XP_012880269	UPI000BACF0E9

Gene Model

Click here to download ENSDORG00000015081's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000015081's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000015081	-	100	81.932	ENSG00000110851	PRDM4	99	82.183	Homo_sapiens
ENSDORG00000015081	-	100	81.955	ENSAMEG00000016174	PRDM4	99	81.704	Ailuropoda_melanoleuca
ENSDORG00000015081	-	100	73.116	ENSAPLG00000009846	PRDM4	99	72.864	Anas_platyrhynchos
ENSDORG00000015081	-	100	81.807	ENSANAG00000024800	PRDM4	99	82.058	Aotus_nancymaae
ENSDORG00000015081	-	100	81.054	ENSBTAG00000012999	PRDM4	99	80.928	Bos_taurus
ENSDORG00000015081	-	100	90.000	ENSCJAG00000015261	PRDM4	99	81.807	Callithrix_jacchus
ENSDORG00000015081	-	100	81.305	ENSCAFG00000001788	PRDM4	99	81.179	Canis_familiaris
ENSDORG00000015081	-	100	81.305	ENSCAFG00020004916	PRDM4	99	81.179	Canis_lupus_dingo
ENSDORG00000015081	-	100	80.928	ENSCHIG00000019409	PRDM4	99	80.803	Capra_hircus
ENSDORG00000015081	-	100	81.430	ENSTSYG00000009248	PRDM4	99	81.179	Carlito_syrichta
ENSDORG00000015081	-	100	76.683	ENSCAPG00000013937	PRDM4	99	76.309	Cavia_aperea
ENSDORG00000015081	-	100	76.238	ENSCPOG00000022385	PRDM4	100	75.836	Cavia_porcellus
ENSDORG00000015081	-	100	81.932	ENSCCAG00000036033	PRDM4	99	82.183	Cebus_capucinus
ENSDORG00000015081	-	100	81.556	ENSCATG00000044797	PRDM4	99	81.807	Cercocebus_atys
ENSDORG00000015081	-	100	89.320	ENSCLAG00000007545	PRDM4	100	78.731	Chinchilla_lanigera
ENSDORG00000015081	-	100	81.807	ENSCSAG00000002896	PRDM4	99	82.058	Chlorocebus_sabaeus
ENSDORG00000015081	-	57	91.262	ENSCHOG00000001744	PRDM4	56	91.558	Choloepus_hoffmanni
ENSDORG00000015081	-	100	74.497	ENSCPBG00000023187	PRDM4	100	74.372	Chrysemys_picta_bellii
ENSDORG00000015081	-	100	81.681	ENSCANG00000021804	PRDM4	99	81.932	Colobus_angolensis_palliatus
ENSDORG00000015081	-	100	79.078	ENSCGRG00001015102	-	100	78.705	Cricetulus_griseus_chok1gshd
ENSDORG00000015081	-	96	78.553	ENSCGRG00000004044	-	100	78.165	Cricetulus_griseus_crigri
ENSDORG00000015081	-	100	80.803	ENSDNOG00000032478	PRDM4	99	80.678	Dasypus_novemcinctus
ENSDORG00000015081	-	93	37.639	ENSEBUG00000003775	prdm4	99	50.459	Eptatretus_burgeri
ENSDORG00000015081	-	100	83.464	ENSECAG00000015423	PRDM4	99	83.934	Equus_caballus
ENSDORG00000015081	-	93	92.182	ENSEEUG00000006569	PRDM4	92	91.205	Erinaceus_europaeus
ENSDORG00000015081	-	99	51.030	ENSELUG00000015265	prdm4	94	51.960	Esox_lucius
ENSDORG00000015081	-	100	81.556	ENSFCAG00000022478	PRDM4	99	81.430	Felis_catus
ENSDORG00000015081	-	100	73.618	ENSFALG00000013342	PRDM4	100	73.618	Ficedula_albicollis
ENSDORG00000015081	-	100	73.308	ENSGALG00000012619	PRDM4	99	73.058	Gallus_gallus
ENSDORG00000015081	-	100	74.279	ENSGAGG00000002763	PRDM4	95	74.153	Gopherus_agassizii
ENSDORG00000015081	-	100	81.932	ENSGGOG00000001244	PRDM4	99	82.183	Gorilla_gorilla
ENSDORG00000015081	-	100	91.558	ENSHGLG00000004590	PRDM4	98	80.653	Heterocephalus_glaber_female
ENSDORG00000015081	-	100	91.558	ENSHGLG00100007464	PRDM4	91	91.558	Heterocephalus_glaber_male
ENSDORG00000015081	-	99	49.330	ENSIPUG00000024162	prdm4	93	51.172	Ictalurus_punctatus
ENSDORG00000015081	-	100	81.430	ENSSTOG00000016168	PRDM4	99	81.179	Ictidomys_tridecemlineatus
ENSDORG00000015081	-	100	74.521	ENSJJAG00000022448	-	95	84.698	Jaculus_jaculus
ENSDORG00000015081	-	100	60.149	ENSLACG00000007452	PRDM4	99	60.396	Latimeria_chalumnae
ENSDORG00000015081	-	93	38.880	ENSLOCG00000017092	prdm4	100	43.544	Lepisosteus_oculatus
ENSDORG00000015081	-	98	92.491	ENSLAFG00000001483	PRDM4	91	92.150	Loxodonta_africana
ENSDORG00000015081	-	100	81.932	ENSMFAG00000041862	PRDM4	99	82.183	Macaca_fascicularis
ENSDORG00000015081	-	100	81.932	ENSMMUG00000015550	PRDM4	99	82.183	Macaca_mulatta
ENSDORG00000015081	-	100	81.681	ENSMNEG00000032319	PRDM4	99	81.932	Macaca_nemestrina
ENSDORG00000015081	-	100	81.807	ENSMLEG00000039607	PRDM4	99	82.058	Mandrillus_leucophaeus
ENSDORG00000015081	-	100	65.582	ENSMGAG00000012815	PRDM4	100	65.332	Meleagris_gallopavo
ENSDORG00000015081	-	100	80.803	ENSMICG00000007807	PRDM4	99	80.552	Microcebus_murinus
ENSDORG00000015081	-	100	79.523	ENSMOCG00000000753	Prdm4	99	79.523	Microtus_ochrogaster
ENSDORG00000015081	-	100	91.883	ENSMUSG00000035529	Prdm4	100	80.528	Mus_musculus
ENSDORG00000015081	-	100	79.925	MGP_PahariEiJ_G0031398	Prdm4	100	80.050	Mus_pahari
ENSDORG00000015081	-	100	91.262	MGP_SPRETEiJ_G0016505	Prdm4	100	80.427	Mus_spretus
ENSDORG00000015081	-	100	80.678	ENSMPUG00000012238	PRDM4	99	80.552	Mustela_putorius_furo
ENSDORG00000015081	-	100	81.681	ENSMLUG00000000767	PRDM4	99	81.556	Myotis_lucifugus
ENSDORG00000015081	-	100	80.803	ENSNGAG00000018627	Prdm4	100	80.928	Nannospalax_galili
ENSDORG00000015081	-	100	81.932	ENSNLEG00000006748	PRDM4	99	82.183	Nomascus_leucogenys
ENSDORG00000015081	-	89	74.883	ENSMEUG00000004495	PRDM4	89	74.883	Notamacropus_eugenii
ENSDORG00000015081	-	93	90.939	ENSOPRG00000010192	PRDM4	85	90.879	Ochotona_princeps
ENSDORG00000015081	-	100	77.136	ENSODEG00000014750	PRDM4	99	77.513	Octodon_degus
ENSDORG00000015081	-	100	75.784	ENSOANG00000005526	PRDM4	99	75.784	Ornithorhynchus_anatinus
ENSDORG00000015081	-	93	80.401	ENSOCUG00000012859	PRDM4	96	80.401	Oryctolagus_cuniculus
ENSDORG00000015081	-	100	81.932	ENSOGAG00000011945	PRDM4	100	81.681	Otolemur_garnettii
ENSDORG00000015081	-	100	80.803	ENSOARG00000017955	PRDM4	99	80.678	Ovis_aries
ENSDORG00000015081	-	100	81.932	ENSPPAG00000038438	PRDM4	99	82.183	Pan_paniscus
ENSDORG00000015081	-	100	81.556	ENSPPRG00000004144	PRDM4	99	81.430	Panthera_pardus
ENSDORG00000015081	-	100	81.556	ENSPTIG00000005847	PRDM4	99	81.430	Panthera_tigris_altaica
ENSDORG00000015081	-	100	81.932	ENSPTRG00000005400	PRDM4	99	82.183	Pan_troglodytes
ENSDORG00000015081	-	100	81.932	ENSPANG00000022084	PRDM4	99	82.183	Papio_anubis
ENSDORG00000015081	-	99	50.237	ENSPKIG00000000875	prdm4	93	52.665	Paramormyrops_kingsleyae
ENSDORG00000015081	-	90	84.790	ENSPSIG00000012066	PRDM4	90	85.113	Pelodiscus_sinensis
ENSDORG00000015081	-	100	80.678	ENSPEMG00000014598	Prdm4	100	80.552	Peromyscus_maniculatus_bairdii
ENSDORG00000015081	-	100	74.375	ENSPCIG00000009471	PRDM4	99	75.862	Phascolarctos_cinereus
ENSDORG00000015081	-	100	81.807	ENSPPYG00000004913	PRDM4	99	82.058	Pongo_abelii
ENSDORG00000015081	-	85	93.023	ENSPCAG00000009987	PRDM4	83	93.023	Procavia_capensis
ENSDORG00000015081	-	100	80.928	ENSPCOG00000021060	PRDM4	99	80.678	Propithecus_coquereli
ENSDORG00000015081	-	100	80.827	ENSPVAG00000001596	PRDM4	99	80.451	Pteropus_vampyrus
ENSDORG00000015081	-	100	79.699	ENSRNOG00000004962	Prdm4	100	79.449	Rattus_norvegicus
ENSDORG00000015081	-	100	81.681	ENSRBIG00000035488	PRDM4	99	81.932	Rhinopithecus_bieti
ENSDORG00000015081	-	100	81.807	ENSRROG00000012779	PRDM4	99	82.058	Rhinopithecus_roxellana
ENSDORG00000015081	-	100	91.250	ENSSBOG00000000403	PRDM4	99	82.058	Saimiri_boliviensis_boliviensis
ENSDORG00000015081	-	99	53.695	ENSSFOG00015023358	prdm4	98	53.695	Scleropages_formosus
ENSDORG00000015081	-	100	81.556	ENSSSCG00000000160	PRDM4	99	81.430	Sus_scrofa
ENSDORG00000015081	-	100	73.492	ENSTGUG00000010962	-	99	73.492	Taeniopygia_guttata
ENSDORG00000015081	-	74	96.098	ENSTBEG00000001732	PRDM4	74	96.569	Tupaia_belangeri
ENSDORG00000015081	-	100	81.054	ENSTTRG00000011056	PRDM4	99	80.928	Tursiops_truncatus
ENSDORG00000015081	-	100	81.807	ENSUAMG00000022796	PRDM4	99	81.681	Ursus_americanus
ENSDORG00000015081	-	100	81.807	ENSUMAG00000017231	PRDM4	99	81.681	Ursus_maritimus
ENSDORG00000015081	-	100	81.556	ENSVPAG00000002215	PRDM4	100	81.430	Vicugna_pacos
ENSDORG00000015081	-	100	81.305	ENSVVUG00000023397	PRDM4	99	81.179	Vulpes_vulpes