EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSDORG00000015140 (Gene tree)
Gene ID: 105985985
Gene Symbol: Snrnp48
Alias: -
Full Name: small nuclear ribonucleoprotein U11/U12 subunit 48
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Plus strand
Length: 17648 bases
Position: chrKN672378.1:7286681-7304328
Accession: 105985985
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000018136	zf-U11-48K	PF05253.12	2.5e-09	1	1
ENSDORP00000014254	zf-U11-48K	PF05253.12	3.2e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000023998	-	801	-	ENSDORP00000018136	266 (aa)	-	UPI000BACF12D
ENSDORT00000015140	-	1213	XM_013016715	ENSDORP00000014254	340 (aa)	XP_012872169	A0A1S3F7Z2

Gene Model

Click here to download ENSDORG00000015140's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000015140's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000015140	Snrnp48	100	88.000	ENSG00000168566	SNRNP48	99	88.791	Homo_sapiens
ENSDORG00000015140	Snrnp48	81	47.183	ENSAPOG00000021430	snrnp48	96	42.980	Acanthochromis_polyacanthus
ENSDORG00000015140	Snrnp48	99	86.310	ENSAMEG00000017349	SNRNP48	100	85.632	Ailuropoda_melanoleuca
ENSDORG00000015140	Snrnp48	97	43.243	ENSACIG00000002032	snrnp48	96	42.450	Amphilophus_citrinellus
ENSDORG00000015140	Snrnp48	81	46.831	ENSAOCG00000010562	snrnp48	96	43.103	Amphiprion_ocellaris
ENSDORG00000015140	Snrnp48	81	47.163	ENSAPEG00000003231	snrnp48	96	43.353	Amphiprion_percula
ENSDORG00000015140	Snrnp48	77	49.817	ENSATEG00000020210	snrnp48	92	44.807	Anabas_testudineus
ENSDORG00000015140	Snrnp48	84	62.752	ENSACAG00000002811	SNRNP48	91	62.752	Anolis_carolinensis
ENSDORG00000015140	Snrnp48	100	87.941	ENSANAG00000033538	SNRNP48	99	88.791	Aotus_nancymaae
ENSDORG00000015140	Snrnp48	92	44.062	ENSAMXG00000015309	snrnp48	98	42.773	Astyanax_mexicanus
ENSDORG00000015140	Snrnp48	99	83.481	ENSBTAG00000001123	SNRNP48	99	83.481	Bos_taurus
ENSDORG00000015140	Snrnp48	100	88.000	ENSCJAG00000021330	SNRNP48	99	88.791	Callithrix_jacchus
ENSDORG00000015140	Snrnp48	99	87.202	ENSCAFG00000009574	SNRNP48	83	87.202	Canis_familiaris
ENSDORG00000015140	Snrnp48	99	87.240	ENSCAFG00020013203	SNRNP48	99	87.500	Canis_lupus_dingo
ENSDORG00000015140	Snrnp48	99	84.956	ENSCHIG00000015216	SNRNP48	99	84.956	Capra_hircus
ENSDORG00000015140	Snrnp48	99	87.021	ENSTSYG00000000698	SNRNP48	99	87.021	Carlito_syrichta
ENSDORG00000015140	Snrnp48	91	84.416	ENSCAPG00000006768	SNRNP48	99	84.691	Cavia_aperea
ENSDORG00000015140	Snrnp48	99	87.316	ENSCPOG00000007910	SNRNP48	99	87.611	Cavia_porcellus
ENSDORG00000015140	Snrnp48	99	87.316	ENSCCAG00000035652	SNRNP48	99	87.906	Cebus_capucinus
ENSDORG00000015140	Snrnp48	100	87.647	ENSCATG00000033947	SNRNP48	99	88.496	Cercocebus_atys
ENSDORG00000015140	Snrnp48	99	87.611	ENSCLAG00000003765	SNRNP48	99	87.906	Chinchilla_lanigera
ENSDORG00000015140	Snrnp48	100	88.529	ENSCSAG00000007409	SNRNP48	99	88.791	Chlorocebus_sabaeus
ENSDORG00000015140	Snrnp48	84	61.258	ENSCPBG00000019146	SNRNP48	92	61.258	Chrysemys_picta_bellii
ENSDORG00000015140	Snrnp48	85	31.104	ENSCING00000004121	-	93	31.310	Ciona_intestinalis
ENSDORG00000015140	Snrnp48	100	88.529	ENSCANG00000030017	SNRNP48	99	89.381	Colobus_angolensis_palliatus
ENSDORG00000015140	Snrnp48	99	68.452	ENSCGRG00001008805	-	95	68.155	Cricetulus_griseus_chok1gshd
ENSDORG00000015140	Snrnp48	100	85.000	ENSCGRG00001001076	-	99	85.841	Cricetulus_griseus_chok1gshd
ENSDORG00000015140	Snrnp48	100	85.000	ENSCGRG00000007781	Snrnp48	99	85.841	Cricetulus_griseus_crigri
ENSDORG00000015140	Snrnp48	76	48.855	ENSCSEG00000000722	snrnp48	72	48.855	Cynoglossus_semilaevis
ENSDORG00000015140	Snrnp48	88	44.805	ENSCVAG00000019829	snrnp48	62	49.194	Cyprinodon_variegatus
ENSDORG00000015140	Snrnp48	81	43.860	ENSDARG00000039989	snrnp48	96	40.936	Danio_rerio
ENSDORG00000015140	Snrnp48	100	85.000	ENSDNOG00000014978	SNRNP48	99	85.251	Dasypus_novemcinctus
ENSDORG00000015140	Snrnp48	50	41.481	ENSEBUG00000016376	-	64	41.060	Eptatretus_burgeri
ENSDORG00000015140	Snrnp48	100	88.235	ENSEASG00005012021	SNRNP48	100	88.235	Equus_asinus_asinus
ENSDORG00000015140	Snrnp48	100	88.529	ENSECAG00000026937	SNRNP48	99	88.791	Equus_caballus
ENSDORG00000015140	Snrnp48	100	76.238	ENSEEUG00000015437	SNRNP48	99	66.862	Erinaceus_europaeus
ENSDORG00000015140	Snrnp48	85	46.000	ENSELUG00000009766	snrnp48	98	42.458	Esox_lucius
ENSDORG00000015140	Snrnp48	100	88.235	ENSFCAG00000018853	SNRNP48	99	88.496	Felis_catus
ENSDORG00000015140	Snrnp48	83	63.793	ENSFALG00000007797	SNRNP48	93	63.793	Ficedula_albicollis
ENSDORG00000015140	Snrnp48	100	87.941	ENSFDAG00000009231	SNRNP48	100	87.941	Fukomys_damarensis
ENSDORG00000015140	Snrnp48	59	53.465	ENSFHEG00000014647	snrnp48	97	45.455	Fundulus_heteroclitus
ENSDORG00000015140	Snrnp48	73	45.382	ENSGMOG00000018599	-	98	40.741	Gadus_morhua
ENSDORG00000015140	Snrnp48	78	65.091	ENSGALG00000013005	SNRNP48	93	65.091	Gallus_gallus
ENSDORG00000015140	Snrnp48	74	49.027	ENSGAFG00000021639	snrnp48	93	43.149	Gambusia_affinis
ENSDORG00000015140	Snrnp48	71	49.794	ENSGACG00000017756	-	96	43.228	Gasterosteus_aculeatus
ENSDORG00000015140	Snrnp48	83	61.149	ENSGAGG00000000865	SNRNP48	96	61.149	Gopherus_agassizii
ENSDORG00000015140	Snrnp48	100	88.000	ENSGGOG00000013220	SNRNP48	99	88.791	Gorilla_gorilla
ENSDORG00000015140	Snrnp48	76	47.710	ENSHBUG00000017066	snrnp48	96	41.899	Haplochromis_burtoni
ENSDORG00000015140	Snrnp48	100	89.118	ENSHGLG00000015241	SNRNP48	100	89.118	Heterocephalus_glaber_female
ENSDORG00000015140	Snrnp48	100	89.118	ENSHGLG00100010027	SNRNP48	100	89.118	Heterocephalus_glaber_male
ENSDORG00000015140	Snrnp48	72	44.939	ENSHCOG00000014066	snrnp48	92	41.071	Hippocampus_comes
ENSDORG00000015140	Snrnp48	100	91.176	ENSSTOG00000014635	SNRNP48	99	91.919	Ictidomys_tridecemlineatus
ENSDORG00000015140	Snrnp48	99	82.891	ENSJJAG00000011495	Snrnp48	99	82.891	Jaculus_jaculus
ENSDORG00000015140	Snrnp48	90	44.660	ENSKMAG00000016514	snrnp48	93	42.857	Kryptolebias_marmoratus
ENSDORG00000015140	Snrnp48	78	48.889	ENSLBEG00000026249	snrnp48	97	43.855	Labrus_bergylta
ENSDORG00000015140	Snrnp48	94	54.154	ENSLACG00000003958	SNRNP48	96	52.959	Latimeria_chalumnae
ENSDORG00000015140	Snrnp48	84	48.621	ENSLOCG00000004187	snrnp48	95	47.041	Lepisosteus_oculatus
ENSDORG00000015140	Snrnp48	100	84.118	ENSLAFG00000011152	SNRNP48	99	84.956	Loxodonta_africana
ENSDORG00000015140	Snrnp48	100	88.235	ENSMFAG00000045216	SNRNP48	99	89.086	Macaca_fascicularis
ENSDORG00000015140	Snrnp48	100	88.235	ENSMMUG00000014785	SNRNP48	99	89.086	Macaca_mulatta
ENSDORG00000015140	Snrnp48	100	88.000	ENSMNEG00000042269	SNRNP48	99	88.791	Macaca_nemestrina
ENSDORG00000015140	Snrnp48	100	88.235	ENSMLEG00000034004	SNRNP48	99	89.086	Mandrillus_leucophaeus
ENSDORG00000015140	Snrnp48	76	46.591	ENSMAMG00000018673	snrnp48	83	42.651	Mastacembelus_armatus
ENSDORG00000015140	Snrnp48	82	63.699	ENSMGAG00000006037	SNRNP48	99	63.356	Meleagris_gallopavo
ENSDORG00000015140	Snrnp48	100	86.765	ENSMAUG00000011944	Snrnp48	99	87.021	Mesocricetus_auratus
ENSDORG00000015140	Snrnp48	100	86.765	ENSMICG00000012497	SNRNP48	99	87.611	Microcebus_murinus
ENSDORG00000015140	Snrnp48	99	86.726	ENSMOCG00000015555	Snrnp48	99	86.726	Microtus_ochrogaster
ENSDORG00000015140	Snrnp48	54	51.351	ENSMMOG00000003072	-	58	51.351	Mola_mola
ENSDORG00000015140	Snrnp48	98	66.860	ENSMODG00000009996	SNRNP48	93	66.860	Monodelphis_domestica
ENSDORG00000015140	Snrnp48	73	50.800	ENSMALG00000005725	snrnp48	93	44.012	Monopterus_albus
ENSDORG00000015140	Snrnp48	99	86.431	MGP_CAROLIEiJ_G0018441	Snrnp48	99	86.431	Mus_caroli
ENSDORG00000015140	Snrnp48	99	85.841	ENSMUSG00000021431	Snrnp48	99	85.841	Mus_musculus
ENSDORG00000015140	Snrnp48	99	85.841	MGP_PahariEiJ_G0019509	Snrnp48	99	85.841	Mus_pahari
ENSDORG00000015140	Snrnp48	99	85.251	MGP_SPRETEiJ_G0019321	Snrnp48	99	85.251	Mus_spretus
ENSDORG00000015140	Snrnp48	99	85.251	ENSNGAG00000004849	Snrnp48	99	85.251	Nannospalax_galili
ENSDORG00000015140	Snrnp48	93	44.479	ENSNBRG00000012127	snrnp48	96	42.529	Neolamprologus_brichardi
ENSDORG00000015140	Snrnp48	100	88.235	ENSNLEG00000011667	SNRNP48	99	89.086	Nomascus_leucogenys
ENSDORG00000015140	Snrnp48	95	77.778	ENSOPRG00000015471	SNRNP48	100	77.160	Ochotona_princeps
ENSDORG00000015140	Snrnp48	50	71.429	ENSODEG00000005816	-	95	71.812	Octodon_degus
ENSDORG00000015140	Snrnp48	93	43.865	ENSONIG00000001520	snrnp48	96	42.297	Oreochromis_niloticus
ENSDORG00000015140	Snrnp48	57	61.058	ENSOANG00000019888	-	100	62.019	Ornithorhynchus_anatinus
ENSDORG00000015140	Snrnp48	84	87.456	ENSOCUG00000005168	SNRNP48	100	86.885	Oryctolagus_cuniculus
ENSDORG00000015140	Snrnp48	89	46.602	ENSORLG00000015654	snrnp48	94	44.092	Oryzias_latipes
ENSDORG00000015140	Snrnp48	89	44.337	ENSORLG00020015976	snrnp48	79	43.402	Oryzias_latipes_hni
ENSDORG00000015140	Snrnp48	89	45.307	ENSORLG00015022379	snrnp48	81	44.092	Oryzias_latipes_hsok
ENSDORG00000015140	Snrnp48	83	46.021	ENSOMEG00000022007	snrnp48	95	42.775	Oryzias_melastigma
ENSDORG00000015140	Snrnp48	92	86.538	ENSOGAG00000005275	SNRNP48	96	86.792	Otolemur_garnettii
ENSDORG00000015140	Snrnp48	84	83.916	ENSOARG00000017319	SNRNP48	99	83.916	Ovis_aries
ENSDORG00000015140	Snrnp48	100	88.235	ENSPPAG00000032873	SNRNP48	99	89.086	Pan_paniscus
ENSDORG00000015140	Snrnp48	100	87.941	ENSPPRG00000004283	SNRNP48	99	88.201	Panthera_pardus
ENSDORG00000015140	Snrnp48	84	88.502	ENSPTIG00000013502	SNRNP48	99	88.811	Panthera_tigris_altaica
ENSDORG00000015140	Snrnp48	100	88.235	ENSPTRG00000017703	SNRNP48	99	89.086	Pan_troglodytes
ENSDORG00000015140	Snrnp48	100	88.235	ENSPANG00000000771	SNRNP48	99	89.086	Papio_anubis
ENSDORG00000015140	Snrnp48	95	43.787	ENSPKIG00000013703	snrnp48	59	48.239	Paramormyrops_kingsleyae
ENSDORG00000015140	Snrnp48	89	58.991	ENSPSIG00000002213	SNRNP48	99	57.453	Pelodiscus_sinensis
ENSDORG00000015140	Snrnp48	72	48.387	ENSPMGG00000008120	snrnp48	86	48.387	Periophthalmus_magnuspinnatus
ENSDORG00000015140	Snrnp48	100	86.471	ENSPEMG00000008872	Snrnp48	99	86.726	Peromyscus_maniculatus_bairdii
ENSDORG00000015140	Snrnp48	74	50.794	ENSPFOG00000003578	snrnp48	93	44.048	Poecilia_formosa
ENSDORG00000015140	Snrnp48	67	50.000	ENSPLAG00000002290	snrnp48	77	50.000	Poecilia_latipinna
ENSDORG00000015140	Snrnp48	74	50.000	ENSPMEG00000018033	snrnp48	93	43.452	Poecilia_mexicana
ENSDORG00000015140	Snrnp48	72	50.607	ENSPREG00000018541	snrnp48	93	44.412	Poecilia_reticulata
ENSDORG00000015140	Snrnp48	100	89.000	ENSPPYG00000016209	SNRNP48	99	88.201	Pongo_abelii
ENSDORG00000015140	Snrnp48	72	80.769	ENSPCAG00000011991	SNRNP48	99	68.421	Procavia_capensis
ENSDORG00000015140	Snrnp48	100	86.000	ENSPVAG00000002854	SNRNP48	100	86.471	Pteropus_vampyrus
ENSDORG00000015140	Snrnp48	76	48.092	ENSPNYG00000015399	snrnp48	99	43.452	Pundamilia_nyererei
ENSDORG00000015140	Snrnp48	99	86.136	ENSRNOG00000013756	Snrnp48	99	86.136	Rattus_norvegicus
ENSDORG00000015140	Snrnp48	93	86.984	ENSRBIG00000043856	SNRNP48	99	87.619	Rhinopithecus_bieti
ENSDORG00000015140	Snrnp48	100	88.000	ENSRROG00000043229	SNRNP48	99	88.791	Rhinopithecus_roxellana
ENSDORG00000015140	Snrnp48	99	88.201	ENSSBOG00000019486	SNRNP48	99	88.791	Saimiri_boliviensis_boliviensis
ENSDORG00000015140	Snrnp48	98	67.151	ENSSHAG00000014483	SNRNP48	99	67.151	Sarcophilus_harrisii
ENSDORG00000015140	Snrnp48	74	49.606	ENSSFOG00015006610	snrnp48	68	48.097	Scleropages_formosus
ENSDORG00000015140	Snrnp48	84	46.367	ENSSDUG00000014953	snrnp48	92	43.620	Seriola_dumerili
ENSDORG00000015140	Snrnp48	84	45.704	ENSSLDG00000005989	snrnp48	92	43.363	Seriola_lalandi_dorsalis
ENSDORG00000015140	Snrnp48	98	58.213	ENSSPUG00000006257	SNRNP48	95	58.213	Sphenodon_punctatus
ENSDORG00000015140	Snrnp48	78	48.364	ENSSPAG00000006454	snrnp48	93	43.195	Stegastes_partitus
ENSDORG00000015140	Snrnp48	83	61.856	ENSTGUG00000007575	SNRNP48	93	62.284	Taeniopygia_guttata
ENSDORG00000015140	Snrnp48	71	50.410	ENSTRUG00000007031	snrnp48	92	45.509	Takifugu_rubripes
ENSDORG00000015140	Snrnp48	91	41.987	ENSTNIG00000012977	-	88	42.765	Tetraodon_nigroviridis
ENSDORG00000015140	Snrnp48	99	82.840	ENSTBEG00000015620	SNRNP48	99	72.271	Tupaia_belangeri
ENSDORG00000015140	Snrnp48	100	84.412	ENSTTRG00000016715	SNRNP48	99	85.251	Tursiops_truncatus
ENSDORG00000015140	Snrnp48	100	87.647	ENSUAMG00000003690	SNRNP48	99	87.906	Ursus_americanus
ENSDORG00000015140	Snrnp48	84	82.578	ENSVPAG00000003557	SNRNP48	99	82.867	Vicugna_pacos
ENSDORG00000015140	Snrnp48	99	86.944	ENSVVUG00000004996	SNRNP48	99	87.202	Vulpes_vulpes
ENSDORG00000015140	Snrnp48	86	52.174	ENSXETG00000020447	snrnp48	97	50.147	Xenopus_tropicalis
ENSDORG00000015140	Snrnp48	67	48.918	ENSXCOG00000004478	snrnp48	69	49.351	Xiphophorus_couchianus
ENSDORG00000015140	Snrnp48	82	47.143	ENSXMAG00000013595	snrnp48	93	43.658	Xiphophorus_maculatus