EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDORG00000015261 (Gene tree)
Gene ID: 105990614
Gene Symbol: Sbno1
Alias: 9330180L10Rik|sno
Full Name: strawberry notch homolog 1
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Plus strand
Length: 42924 bases
Position: chrKN672412.1:3179227-3222150
Accession: 105990614
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000014370	ResIII	PF04851.15	2.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000015267	-	3981	XM_013023055	ENSDORP00000014370	1326 (aa)	XP_012878509	UPI000BAD1B5C

Gene Model

Click here to download ENSDORG00000015261's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000015261's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDORG00000015261	Sbno1	68	67.866	ENSDORG00000002916	Sbno2	66	67.866

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000015261	Sbno1	100	83.202	ENSG00000139697	SBNO1	100	83.202	Homo_sapiens
ENSDORG00000015261	Sbno1	83	80.553	ENSAPOG00000003196	sbno1	95	80.731	Acanthochromis_polyacanthus
ENSDORG00000015261	Sbno1	100	83.405	ENSAMEG00000015151	SBNO1	100	83.405	Ailuropoda_melanoleuca
ENSDORG00000015261	Sbno1	99	69.565	ENSACIG00000008088	sbno1	99	69.472	Amphilophus_citrinellus
ENSDORG00000015261	Sbno1	83	80.018	ENSAOCG00000014859	sbno1	99	69.361	Amphiprion_ocellaris
ENSDORG00000015261	Sbno1	83	80.018	ENSAPEG00000006069	sbno1	99	69.361	Amphiprion_percula
ENSDORG00000015261	Sbno1	99	80.553	ENSATEG00000006667	sbno1	99	72.911	Anabas_testudineus
ENSDORG00000015261	Sbno1	84	91.622	ENSAPLG00000015674	SBNO1	100	85.222	Anas_platyrhynchos
ENSDORG00000015261	Sbno1	84	91.081	ENSACAG00000015441	SBNO1	88	77.762	Anolis_carolinensis
ENSDORG00000015261	Sbno1	100	84.362	ENSANAG00000029958	-	100	84.079	Aotus_nancymaae
ENSDORG00000015261	Sbno1	99	70.210	ENSACLG00000024913	sbno1	99	70.965	Astatotilapia_calliptera
ENSDORG00000015261	Sbno1	99	70.798	ENSAMXG00000019473	sbno1	99	72.242	Astyanax_mexicanus
ENSDORG00000015261	Sbno1	99	84.361	ENSBTAG00000020505	SBNO1	99	84.361	Bos_taurus
ENSDORG00000015261	Sbno1	100	83.548	ENSCJAG00000016599	SBNO1	100	83.548	Callithrix_jacchus
ENSDORG00000015261	Sbno1	100	83.571	ENSCAFG00000007503	SBNO1	100	83.571	Canis_familiaris
ENSDORG00000015261	Sbno1	100	89.340	ENSCAFG00020015363	SBNO1	100	90.210	Canis_lupus_dingo
ENSDORG00000015261	Sbno1	95	97.683	ENSCHIG00000008382	SBNO1	99	97.683	Capra_hircus
ENSDORG00000015261	Sbno1	95	91.171	ENSTSYG00000012749	SBNO1	100	90.681	Carlito_syrichta
ENSDORG00000015261	Sbno1	95	96.835	ENSCAPG00000000384	SBNO1	94	97.865	Cavia_aperea
ENSDORG00000015261	Sbno1	99	96.835	ENSCPOG00000008109	SBNO1	100	97.865	Cavia_porcellus
ENSDORG00000015261	Sbno1	95	86.501	ENSCCAG00000035316	SBNO1	100	86.501	Cebus_capucinus
ENSDORG00000015261	Sbno1	97	97.207	ENSCATG00000008239	SBNO1	93	99.099	Cercocebus_atys
ENSDORG00000015261	Sbno1	95	97.865	ENSCLAG00000008995	SBNO1	100	97.865	Chinchilla_lanigera
ENSDORG00000015261	Sbno1	84	97.207	ENSCSAG00000002064	SBNO1	96	97.207	Chlorocebus_sabaeus
ENSDORG00000015261	Sbno1	93	96.565	ENSCHOG00000008814	SBNO1	89	96.565	Choloepus_hoffmanni
ENSDORG00000015261	Sbno1	99	92.529	ENSCPBG00000025968	SBNO1	99	80.645	Chrysemys_picta_bellii
ENSDORG00000015261	Sbno1	99	91.802	ENSCANG00000042688	-	95	91.802	Colobus_angolensis_palliatus
ENSDORG00000015261	Sbno1	95	96.797	ENSCGRG00001017470	Sbno1	100	96.797	Cricetulus_griseus_chok1gshd
ENSDORG00000015261	Sbno1	95	96.797	ENSCGRG00000004756	Sbno1	100	96.797	Cricetulus_griseus_crigri
ENSDORG00000015261	Sbno1	99	70.860	ENSCSEG00000011919	sbno1	99	71.552	Cynoglossus_semilaevis
ENSDORG00000015261	Sbno1	99	80.234	ENSCVAG00000007038	sbno1	95	80.714	Cyprinodon_variegatus
ENSDORG00000015261	Sbno1	99	83.559	ENSDARG00000099080	sbno1	99	72.760	Danio_rerio
ENSDORG00000015261	Sbno1	100	91.255	ENSDNOG00000017147	SBNO1	96	91.255	Dasypus_novemcinctus
ENSDORG00000015261	Sbno1	93	90.282	ENSETEG00000005620	SBNO1	88	90.282	Echinops_telfairi
ENSDORG00000015261	Sbno1	73	58.846	ENSEBUG00000013823	sbno1	93	58.677	Eptatretus_burgeri
ENSDORG00000015261	Sbno1	100	83.977	ENSECAG00000006127	SBNO1	100	83.977	Equus_caballus
ENSDORG00000015261	Sbno1	80	100.000	ENSEEUG00000003793	SBNO1	76	100.000	Erinaceus_europaeus
ENSDORG00000015261	Sbno1	99	73.540	ENSELUG00000002886	sbno1	99	73.629	Esox_lucius
ENSDORG00000015261	Sbno1	99	83.966	ENSFCAG00000015331	SBNO1	99	83.966	Felis_catus
ENSDORG00000015261	Sbno1	99	91.712	ENSFALG00000009273	SBNO1	100	85.366	Ficedula_albicollis
ENSDORG00000015261	Sbno1	94	95.109	ENSFDAG00000014232	SBNO1	99	94.296	Fukomys_damarensis
ENSDORG00000015261	Sbno1	99	80.755	ENSFHEG00000007360	sbno1	99	71.167	Fundulus_heteroclitus
ENSDORG00000015261	Sbno1	94	81.431	ENSGMOG00000018229	sbno1	99	72.290	Gadus_morhua
ENSDORG00000015261	Sbno1	71	92.624	ENSGALG00000003392	SBNO1	99	80.860	Gallus_gallus
ENSDORG00000015261	Sbno1	99	80.811	ENSGAFG00000003960	sbno1	99	71.298	Gambusia_affinis
ENSDORG00000015261	Sbno1	93	72.498	ENSGACG00000015633	sbno1	99	72.366	Gasterosteus_aculeatus
ENSDORG00000015261	Sbno1	99	91.712	ENSGAGG00000001065	SBNO1	99	94.484	Gopherus_agassizii
ENSDORG00000015261	Sbno1	100	84.311	ENSGGOG00000015000	SBNO1	100	84.311	Gorilla_gorilla
ENSDORG00000015261	Sbno1	99	64.507	ENSHBUG00000011910	sbno1	99	65.280	Haplochromis_burtoni
ENSDORG00000015261	Sbno1	100	83.381	ENSHGLG00000014165	-	100	83.381	Heterocephalus_glaber_female
ENSDORG00000015261	Sbno1	91	84.283	ENSHCOG00000003246	sbno1	95	84.283	Hippocampus_comes
ENSDORG00000015261	Sbno1	99	71.895	ENSIPUG00000015830	Sbno1	98	72.394	Ictalurus_punctatus
ENSDORG00000015261	Sbno1	100	84.666	ENSSTOG00000023221	SBNO1	100	84.666	Ictidomys_tridecemlineatus
ENSDORG00000015261	Sbno1	95	93.238	ENSJJAG00000001741	Sbno1	100	93.728	Jaculus_jaculus
ENSDORG00000015261	Sbno1	99	71.326	ENSKMAG00000009696	sbno1	99	71.255	Kryptolebias_marmoratus
ENSDORG00000015261	Sbno1	99	71.924	ENSLBEG00000007623	sbno1	99	72.277	Labrus_bergylta
ENSDORG00000015261	Sbno1	99	71.766	ENSLACG00000017227	SBNO1	99	72.823	Latimeria_chalumnae
ENSDORG00000015261	Sbno1	99	73.752	ENSLOCG00000005725	sbno1	97	76.245	Lepisosteus_oculatus
ENSDORG00000015261	Sbno1	100	90.524	ENSLAFG00000002135	SBNO1	100	90.524	Loxodonta_africana
ENSDORG00000015261	Sbno1	99	97.207	ENSMFAG00000031429	SBNO1	100	93.662	Macaca_fascicularis
ENSDORG00000015261	Sbno1	99	97.207	ENSMMUG00000011496	SBNO1	100	93.662	Macaca_mulatta
ENSDORG00000015261	Sbno1	98	97.297	ENSMLEG00000033260	SBNO1	100	91.371	Mandrillus_leucophaeus
ENSDORG00000015261	Sbno1	99	70.148	ENSMAMG00000005473	sbno1	99	70.949	Mastacembelus_armatus
ENSDORG00000015261	Sbno1	84	91.712	ENSMGAG00000003274	SBNO1	100	85.366	Meleagris_gallopavo
ENSDORG00000015261	Sbno1	100	83.346	ENSMICG00000006573	-	100	83.346	Microcebus_murinus
ENSDORG00000015261	Sbno1	99	91.906	ENSMOCG00000009390	Sbno1	100	80.444	Microtus_ochrogaster
ENSDORG00000015261	Sbno1	99	76.381	ENSMMOG00000008691	sbno1	99	66.381	Mola_mola
ENSDORG00000015261	Sbno1	99	94.590	ENSMODG00000012470	SBNO1	92	93.405	Monodelphis_domestica
ENSDORG00000015261	Sbno1	99	79.893	ENSMALG00000001056	sbno1	99	69.331	Monopterus_albus
ENSDORG00000015261	Sbno1	99	83.931	MGP_CAROLIEiJ_G0027749	Sbno1	99	83.931	Mus_caroli
ENSDORG00000015261	Sbno1	99	84.218	ENSMUSG00000038095	Sbno1	99	84.218	Mus_musculus
ENSDORG00000015261	Sbno1	99	84.290	MGP_PahariEiJ_G0024329	Sbno1	99	84.290	Mus_pahari
ENSDORG00000015261	Sbno1	99	84.003	MGP_SPRETEiJ_G0028747	Sbno1	99	84.003	Mus_spretus
ENSDORG00000015261	Sbno1	100	83.834	ENSMPUG00000001658	SBNO1	100	83.834	Mustela_putorius_furo
ENSDORG00000015261	Sbno1	100	83.656	ENSMLUG00000017159	SBNO1	100	83.656	Myotis_lucifugus
ENSDORG00000015261	Sbno1	92	98.062	ENSNGAG00000012620	Sbno1	98	98.062	Nannospalax_galili
ENSDORG00000015261	Sbno1	99	69.180	ENSNBRG00000019189	sbno1	99	69.220	Neolamprologus_brichardi
ENSDORG00000015261	Sbno1	95	88.256	ENSNLEG00000001502	SBNO1	100	88.530	Nomascus_leucogenys
ENSDORG00000015261	Sbno1	60	86.076	ENSMEUG00000008768	-	86	89.873	Notamacropus_eugenii
ENSDORG00000015261	Sbno1	84	94.514	ENSOPRG00000011054	SBNO1	100	81.877	Ochotona_princeps
ENSDORG00000015261	Sbno1	99	96.577	ENSODEG00000009997	SBNO1	95	96.577	Octodon_degus
ENSDORG00000015261	Sbno1	99	80.957	ENSONIG00000015348	sbno1	99	69.128	Oreochromis_niloticus
ENSDORG00000015261	Sbno1	98	82.507	ENSOCUG00000002441	SBNO1	95	82.507	Oryctolagus_cuniculus
ENSDORG00000015261	Sbno1	99	80.251	ENSORLG00000001593	sbno1	99	67.913	Oryzias_latipes
ENSDORG00000015261	Sbno1	99	80.503	ENSORLG00020015216	sbno1	99	67.890	Oryzias_latipes_hni
ENSDORG00000015261	Sbno1	99	80.413	ENSORLG00015002726	sbno1	99	67.960	Oryzias_latipes_hsok
ENSDORG00000015261	Sbno1	99	80.738	ENSOMEG00000019313	sbno1	99	68.320	Oryzias_melastigma
ENSDORG00000015261	Sbno1	99	84.263	ENSOARG00000004404	SBNO1	99	84.263	Ovis_aries
ENSDORG00000015261	Sbno1	100	84.311	ENSPPAG00000024635	SBNO1	100	84.311	Pan_paniscus
ENSDORG00000015261	Sbno1	99	83.966	ENSPPRG00000022092	SBNO1	99	83.966	Panthera_pardus
ENSDORG00000015261	Sbno1	100	83.691	ENSPTIG00000017803	SBNO1	100	83.691	Panthera_tigris_altaica
ENSDORG00000015261	Sbno1	100	84.384	ENSPTRG00000005597	SBNO1	100	84.384	Pan_troglodytes
ENSDORG00000015261	Sbno1	99	97.297	ENSPANG00000011640	SBNO1	100	93.508	Papio_anubis
ENSDORG00000015261	Sbno1	83	83.453	ENSPKIG00000001441	sbno1	99	73.820	Paramormyrops_kingsleyae
ENSDORG00000015261	Sbno1	89	90.628	ENSPSIG00000009256	-	93	90.628	Pelodiscus_sinensis
ENSDORG00000015261	Sbno1	99	91.324	ENSPSIG00000009572	-	100	81.286	Pelodiscus_sinensis
ENSDORG00000015261	Sbno1	95	96.619	ENSPEMG00000016087	Sbno1	100	96.619	Peromyscus_maniculatus_bairdii
ENSDORG00000015261	Sbno1	99	94.319	ENSPCIG00000010985	SBNO1	99	82.098	Phascolarctos_cinereus
ENSDORG00000015261	Sbno1	99	81.278	ENSPFOG00000005069	sbno1	99	72.222	Poecilia_formosa
ENSDORG00000015261	Sbno1	99	81.188	ENSPLAG00000015015	sbno1	99	71.388	Poecilia_latipinna
ENSDORG00000015261	Sbno1	99	81.278	ENSPMEG00000021212	sbno1	99	71.409	Poecilia_mexicana
ENSDORG00000015261	Sbno1	99	80.700	ENSPREG00000017746	sbno1	99	71.345	Poecilia_reticulata
ENSDORG00000015261	Sbno1	99	96.847	ENSPPYG00000005084	SBNO1	95	96.847	Pongo_abelii
ENSDORG00000015261	Sbno1	88	90.783	ENSPCAG00000008634	SBNO1	83	90.783	Procavia_capensis
ENSDORG00000015261	Sbno1	95	98.727	ENSPCOG00000024277	SBNO1	99	98.727	Propithecus_coquereli
ENSDORG00000015261	Sbno1	86	98.810	ENSPVAG00000015304	SBNO1	87	98.810	Pteropus_vampyrus
ENSDORG00000015261	Sbno1	99	80.957	ENSPNYG00000004291	sbno1	95	80.863	Pundamilia_nyererei
ENSDORG00000015261	Sbno1	99	71.764	ENSPNAG00000015622	sbno1	99	71.713	Pygocentrus_nattereri
ENSDORG00000015261	Sbno1	95	97.683	ENSRNOG00000001064	Sbno1	99	97.683	Rattus_norvegicus
ENSDORG00000015261	Sbno1	100	84.604	ENSRROG00000034230	SBNO1	100	84.604	Rhinopithecus_roxellana
ENSDORG00000015261	Sbno1	96	87.284	ENSSBOG00000015422	SBNO1	99	88.351	Saimiri_boliviensis_boliviensis
ENSDORG00000015261	Sbno1	99	72.409	ENSSFOG00015019025	sbno1	99	73.157	Scleropages_formosus
ENSDORG00000015261	Sbno1	99	72.274	ENSSMAG00000013640	sbno1	99	72.635	Scophthalmus_maximus
ENSDORG00000015261	Sbno1	99	72.456	ENSSDUG00000023480	sbno1	99	72.529	Seriola_dumerili
ENSDORG00000015261	Sbno1	99	72.985	ENSSLDG00000007928	sbno1	99	73.057	Seriola_lalandi_dorsalis
ENSDORG00000015261	Sbno1	89	98.220	ENSSARG00000002594	SBNO1	89	98.220	Sorex_araneus
ENSDORG00000015261	Sbno1	84	90.999	ENSSPUG00000012640	SBNO1	100	79.530	Sphenodon_punctatus
ENSDORG00000015261	Sbno1	99	79.929	ENSSPAG00000016244	sbno1	99	68.772	Stegastes_partitus
ENSDORG00000015261	Sbno1	100	84.519	ENSSSCG00000009776	SBNO1	100	84.519	Sus_scrofa
ENSDORG00000015261	Sbno1	99	91.802	ENSTGUG00000005380	SBNO1	100	85.222	Taeniopygia_guttata
ENSDORG00000015261	Sbno1	99	80.396	ENSTRUG00000018490	sbno1	95	80.269	Takifugu_rubripes
ENSDORG00000015261	Sbno1	54	79.880	ENSTNIG00000013506	sbno1	90	80.120	Tetraodon_nigroviridis
ENSDORG00000015261	Sbno1	100	83.834	ENSUAMG00000019671	SBNO1	100	83.834	Ursus_americanus
ENSDORG00000015261	Sbno1	100	83.834	ENSUMAG00000004002	SBNO1	100	83.834	Ursus_maritimus
ENSDORG00000015261	Sbno1	95	94.489	ENSVPAG00000007024	SBNO1	90	94.489	Vicugna_pacos
ENSDORG00000015261	Sbno1	100	83.763	ENSVVUG00000027807	SBNO1	100	83.763	Vulpes_vulpes
ENSDORG00000015261	Sbno1	99	88.095	ENSXETG00000031930	SBNO1	96	87.852	Xenopus_tropicalis
ENSDORG00000015261	Sbno1	87	81.044	ENSXCOG00000011607	sbno1	95	69.663	Xiphophorus_couchianus
ENSDORG00000015261	Sbno1	99	80.828	ENSXMAG00000002140	sbno1	99	71.198	Xiphophorus_maculatus