EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSDORG00000015384 (Gene tree)
Gene ID: 105982717
Gene Symbol: Pop1
Alias: 4932434G09Rik
Full Name: POP1 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Minus strand
Length: 30652 bases
Position: chrKN672363.1:12498862-12529513
Accession: 105982717
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000014477	POP1	PF06978.11	2.4e-19	1	1
ENSDORP00000024380	POP1	PF06978.11	2.6e-19	1	1
ENSDORP00000014477	POPLD	PF08170.12	6e-27	1	1
ENSDORP00000024380	POPLD	PF08170.12	6e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000015383	-	2895	XM_013012395	ENSDORP00000014477	964 (aa)	XP_012867849	UPI000BAD1116
ENSDORT00000029890	-	2985	-	ENSDORP00000024380	994 (aa)	-	UPI000BAD0E04

Gene Model

Click here to download ENSDORG00000015384's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000015384's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000015384	Pop1	100	72.390	ENSG00000104356	POP1	89	84.663	Homo_sapiens
ENSDORG00000015384	Pop1	100	42.015	ENSAPOG00000008198	pop1	100	43.333	Acanthochromis_polyacanthus
ENSDORG00000015384	Pop1	100	67.925	ENSAMEG00000000556	POP1	100	67.925	Ailuropoda_melanoleuca
ENSDORG00000015384	Pop1	89	43.897	ENSACIG00000004169	POP1	93	43.631	Amphilophus_citrinellus
ENSDORG00000015384	Pop1	100	41.087	ENSAOCG00000010991	pop1	100	42.176	Amphiprion_ocellaris
ENSDORG00000015384	Pop1	91	42.469	ENSAPEG00000007607	pop1	96	42.040	Amphiprion_percula
ENSDORG00000015384	Pop1	100	40.702	ENSATEG00000024814	POP1	100	40.265	Anabas_testudineus
ENSDORG00000015384	Pop1	91	53.879	ENSAPLG00000014418	POP1	99	53.191	Anas_platyrhynchos
ENSDORG00000015384	Pop1	99	50.195	ENSACAG00000016083	POP1	100	49.467	Anolis_carolinensis
ENSDORG00000015384	Pop1	88	75.880	ENSANAG00000026360	POP1	99	75.880	Aotus_nancymaae
ENSDORG00000015384	Pop1	100	42.490	ENSACLG00000010951	pop1	100	42.275	Astatotilapia_calliptera
ENSDORG00000015384	Pop1	100	40.720	ENSAMXG00000014483	POP1	100	40.628	Astyanax_mexicanus
ENSDORG00000015384	Pop1	100	68.616	ENSBTAG00000012596	POP1	100	69.110	Bos_taurus
ENSDORG00000015384	Pop1	100	70.760	ENSCJAG00000015567	POP1	100	71.345	Callithrix_jacchus
ENSDORG00000015384	Pop1	100	67.679	ENSCAFG00000000469	POP1	100	67.679	Canis_familiaris
ENSDORG00000015384	Pop1	100	68.652	ENSCAFG00020026765	POP1	100	68.652	Canis_lupus_dingo
ENSDORG00000015384	Pop1	100	68.939	ENSCHIG00000017066	POP1	100	69.268	Capra_hircus
ENSDORG00000015384	Pop1	100	71.902	ENSTSYG00000003097	POP1	100	71.832	Carlito_syrichta
ENSDORG00000015384	Pop1	100	68.293	ENSCAPG00000007251	POP1	100	68.482	Cavia_aperea
ENSDORG00000015384	Pop1	100	71.275	ENSCPOG00000002901	POP1	100	71.457	Cavia_porcellus
ENSDORG00000015384	Pop1	100	69.874	ENSCCAG00000018939	POP1	100	71.540	Cebus_capucinus
ENSDORG00000015384	Pop1	100	72.488	ENSCATG00000040916	POP1	100	72.585	Cercocebus_atys
ENSDORG00000015384	Pop1	100	72.515	ENSCLAG00000007208	POP1	97	72.515	Chinchilla_lanigera
ENSDORG00000015384	Pop1	89	71.258	ENSCSAG00000012340	POP1	99	71.909	Chlorocebus_sabaeus
ENSDORG00000015384	Pop1	95	67.456	ENSCHOG00000011432	POP1	96	74.000	Choloepus_hoffmanni
ENSDORG00000015384	Pop1	100	56.378	ENSCPBG00000006373	POP1	100	55.394	Chrysemys_picta_bellii
ENSDORG00000015384	Pop1	69	51.351	ENSCING00000008323	-	71	51.351	Ciona_intestinalis
ENSDORG00000015384	Pop1	100	72.461	ENSCANG00000001647	POP1	100	72.559	Colobus_angolensis_palliatus
ENSDORG00000015384	Pop1	100	67.366	ENSCGRG00001017308	Pop1	100	67.366	Cricetulus_griseus_chok1gshd
ENSDORG00000015384	Pop1	100	68.682	ENSCGRG00000010824	Pop1	100	68.682	Cricetulus_griseus_crigri
ENSDORG00000015384	Pop1	100	40.095	ENSCSEG00000008737	POP1	100	39.829	Cynoglossus_semilaevis
ENSDORG00000015384	Pop1	100	41.126	ENSCVAG00000022248	pop1	100	41.013	Cyprinodon_variegatus
ENSDORG00000015384	Pop1	100	67.730	ENSDNOG00000019974	POP1	100	67.355	Dasypus_novemcinctus
ENSDORG00000015384	Pop1	88	58.876	ENSETEG00000007839	POP1	88	58.876	Echinops_telfairi
ENSDORG00000015384	Pop1	50	35.471	ENSEBUG00000014694	-	99	36.056	Eptatretus_burgeri
ENSDORG00000015384	Pop1	100	70.703	ENSEASG00005003189	POP1	98	71.191	Equus_asinus_asinus
ENSDORG00000015384	Pop1	100	70.703	ENSECAG00000024236	POP1	100	71.191	Equus_caballus
ENSDORG00000015384	Pop1	55	76.364	ENSEEUG00000003050	-	55	76.364	Erinaceus_europaeus
ENSDORG00000015384	Pop1	100	40.625	ENSELUG00000003526	pop1	100	41.834	Esox_lucius
ENSDORG00000015384	Pop1	100	70.634	ENSFCAG00000002168	POP1	100	70.146	Felis_catus
ENSDORG00000015384	Pop1	100	51.741	ENSFALG00000005711	POP1	100	52.182	Ficedula_albicollis
ENSDORG00000015384	Pop1	100	73.118	ENSFDAG00000017068	POP1	100	73.118	Fukomys_damarensis
ENSDORG00000015384	Pop1	100	42.459	ENSFHEG00000019518	pop1	100	42.545	Fundulus_heteroclitus
ENSDORG00000015384	Pop1	91	43.966	ENSGMOG00000000659	POP1	91	43.966	Gadus_morhua
ENSDORG00000015384	Pop1	100	41.948	ENSGAFG00000019770	POP1	100	41.273	Gambusia_affinis
ENSDORG00000015384	Pop1	100	39.733	ENSGACG00000003499	pop1	100	39.617	Gasterosteus_aculeatus
ENSDORG00000015384	Pop1	100	54.730	ENSGAGG00000011737	POP1	98	54.078	Gopherus_agassizii
ENSDORG00000015384	Pop1	100	72.098	ENSGGOG00000003176	POP1	100	72.585	Gorilla_gorilla
ENSDORG00000015384	Pop1	100	42.776	ENSHBUG00000021583	pop1	100	42.545	Haplochromis_burtoni
ENSDORG00000015384	Pop1	100	71.735	ENSHGLG00000006029	POP1	100	71.735	Heterocephalus_glaber_female
ENSDORG00000015384	Pop1	100	71.735	ENSHGLG00100016879	POP1	100	71.735	Heterocephalus_glaber_male
ENSDORG00000015384	Pop1	89	44.055	ENSHCOG00000013888	pop1	96	43.856	Hippocampus_comes
ENSDORG00000015384	Pop1	100	38.810	ENSIPUG00000018336	pop1	91	63.855	Ictalurus_punctatus
ENSDORG00000015384	Pop1	100	74.878	ENSSTOG00000011455	POP1	97	73.705	Ictidomys_tridecemlineatus
ENSDORG00000015384	Pop1	100	67.223	ENSJJAG00000013325	Pop1	100	66.634	Jaculus_jaculus
ENSDORG00000015384	Pop1	100	41.667	ENSKMAG00000001346	POP1	100	41.279	Kryptolebias_marmoratus
ENSDORG00000015384	Pop1	88	42.733	ENSLBEG00000024457	POP1	95	42.173	Labrus_bergylta
ENSDORG00000015384	Pop1	93	48.837	ENSLACG00000012498	POP1	99	49.039	Latimeria_chalumnae
ENSDORG00000015384	Pop1	100	45.665	ENSLOCG00000009817	POP1	100	45.930	Lepisosteus_oculatus
ENSDORG00000015384	Pop1	100	70.888	ENSLAFG00000010770	POP1	100	70.888	Loxodonta_africana
ENSDORG00000015384	Pop1	100	72.488	ENSMFAG00000000347	POP1	100	72.585	Macaca_fascicularis
ENSDORG00000015384	Pop1	100	71.610	ENSMNEG00000036870	POP1	100	72.195	Macaca_nemestrina
ENSDORG00000015384	Pop1	100	72.488	ENSMLEG00000034986	POP1	100	72.585	Mandrillus_leucophaeus
ENSDORG00000015384	Pop1	100	40.987	ENSMAMG00000004040	pop1	100	40.797	Mastacembelus_armatus
ENSDORG00000015384	Pop1	100	42.966	ENSMZEG00005025448	pop1	100	42.330	Maylandia_zebra
ENSDORG00000015384	Pop1	100	52.174	ENSMGAG00000012167	POP1	100	52.268	Meleagris_gallopavo
ENSDORG00000015384	Pop1	100	68.156	ENSMAUG00000017537	Pop1	100	68.251	Mesocricetus_auratus
ENSDORG00000015384	Pop1	100	72.754	ENSMICG00000004361	POP1	100	72.754	Microcebus_murinus
ENSDORG00000015384	Pop1	100	67.049	ENSMOCG00000006356	Pop1	100	67.813	Microtus_ochrogaster
ENSDORG00000015384	Pop1	100	41.235	ENSMMOG00000018242	pop1	100	41.352	Mola_mola
ENSDORG00000015384	Pop1	100	58.366	ENSMODG00000006561	POP1	100	58.447	Monodelphis_domestica
ENSDORG00000015384	Pop1	100	42.462	ENSMALG00000012621	POP1	100	42.748	Monopterus_albus
ENSDORG00000015384	Pop1	100	67.457	MGP_CAROLIEiJ_G0019726	Pop1	100	67.871	Mus_caroli
ENSDORG00000015384	Pop1	100	67.742	ENSMUSG00000022325	Pop1	100	68.156	Mus_musculus
ENSDORG00000015384	Pop1	100	67.142	MGP_PahariEiJ_G0019735	Pop1	100	67.142	Mus_pahari
ENSDORG00000015384	Pop1	100	67.647	MGP_SPRETEiJ_G0020622	Pop1	100	68.061	Mus_spretus
ENSDORG00000015384	Pop1	100	69.291	ENSMPUG00000015250	POP1	100	68.805	Mustela_putorius_furo
ENSDORG00000015384	Pop1	100	64.854	ENSMLUG00000010204	POP1	100	65.534	Myotis_lucifugus
ENSDORG00000015384	Pop1	100	72.692	ENSNGAG00000001582	Pop1	100	72.692	Nannospalax_galili
ENSDORG00000015384	Pop1	88	44.740	ENSNBRG00000002356	pop1	94	44.275	Neolamprologus_brichardi
ENSDORG00000015384	Pop1	100	71.289	ENSNLEG00000002541	POP1	100	71.875	Nomascus_leucogenys
ENSDORG00000015384	Pop1	86	59.081	ENSMEUG00000003118	POP1	94	59.081	Notamacropus_eugenii
ENSDORG00000015384	Pop1	100	68.390	ENSOPRG00000007667	POP1	100	68.390	Ochotona_princeps
ENSDORG00000015384	Pop1	100	70.136	ENSODEG00000003984	POP1	100	70.136	Octodon_degus
ENSDORG00000015384	Pop1	100	43.264	ENSONIG00000016445	pop1	100	42.938	Oreochromis_niloticus
ENSDORG00000015384	Pop1	66	61.484	ENSOANG00000001278	-	94	60.714	Ornithorhynchus_anatinus
ENSDORG00000015384	Pop1	100	69.952	ENSOCUG00000017400	POP1	100	69.952	Oryctolagus_cuniculus
ENSDORG00000015384	Pop1	90	44.468	ENSORLG00000002839	pop1	100	42.693	Oryzias_latipes
ENSDORG00000015384	Pop1	89	43.889	ENSORLG00020022450	POP1	96	43.882	Oryzias_latipes_hni
ENSDORG00000015384	Pop1	100	41.244	ENSORLG00015012746	POP1	100	43.269	Oryzias_latipes_hsok
ENSDORG00000015384	Pop1	100	42.064	ENSOMEG00000006915	pop1	99	41.764	Oryzias_melastigma
ENSDORG00000015384	Pop1	100	70.898	ENSOGAG00000001466	POP1	100	70.898	Otolemur_garnettii
ENSDORG00000015384	Pop1	100	72.195	ENSPPAG00000018410	POP1	100	72.683	Pan_paniscus
ENSDORG00000015384	Pop1	100	70.078	ENSPPRG00000005002	POP1	100	69.591	Panthera_pardus
ENSDORG00000015384	Pop1	100	70.468	ENSPTIG00000016527	POP1	100	69.981	Panthera_tigris_altaica
ENSDORG00000015384	Pop1	100	72.293	ENSPTRG00000020458	POP1	100	72.780	Pan_troglodytes
ENSDORG00000015384	Pop1	100	72.098	ENSPANG00000009704	POP1	100	72.195	Papio_anubis
ENSDORG00000015384	Pop1	100	42.131	ENSPKIG00000016325	POP1	100	42.706	Paramormyrops_kingsleyae
ENSDORG00000015384	Pop1	100	54.793	ENSPSIG00000012343	POP1	100	54.648	Pelodiscus_sinensis
ENSDORG00000015384	Pop1	90	42.980	ENSPMGG00000022253	POP1	95	44.791	Periophthalmus_magnuspinnatus
ENSDORG00000015384	Pop1	99	67.779	ENSPEMG00000023633	Pop1	100	67.874	Peromyscus_maniculatus_bairdii
ENSDORG00000015384	Pop1	90	39.487	ENSPMAG00000003209	POP1	100	40.952	Petromyzon_marinus
ENSDORG00000015384	Pop1	100	58.544	ENSPCIG00000012216	POP1	100	58.544	Phascolarctos_cinereus
ENSDORG00000015384	Pop1	100	42.304	ENSPFOG00000012490	POP1	100	42.166	Poecilia_formosa
ENSDORG00000015384	Pop1	100	42.442	ENSPLAG00000004646	POP1	100	41.715	Poecilia_latipinna
ENSDORG00000015384	Pop1	100	42.663	ENSPMEG00000019592	POP1	100	42.456	Poecilia_mexicana
ENSDORG00000015384	Pop1	100	42.733	ENSPREG00000020951	POP1	100	42.541	Poecilia_reticulata
ENSDORG00000015384	Pop1	100	72.000	ENSPPYG00000018777	POP1	100	72.585	Pongo_abelii
ENSDORG00000015384	Pop1	100	66.244	ENSPCAG00000016662	POP1	100	64.976	Procavia_capensis
ENSDORG00000015384	Pop1	100	72.585	ENSPCOG00000019420	POP1	100	72.585	Propithecus_coquereli
ENSDORG00000015384	Pop1	100	69.455	ENSPVAG00000014468	POP1	100	70.233	Pteropus_vampyrus
ENSDORG00000015384	Pop1	88	45.094	ENSPNYG00000004476	pop1	97	44.609	Pundamilia_nyererei
ENSDORG00000015384	Pop1	100	40.463	ENSPNAG00000000265	pop1	100	40.278	Pygocentrus_nattereri
ENSDORG00000015384	Pop1	100	67.773	ENSRNOG00000005243	Pop1	100	68.121	Rattus_norvegicus
ENSDORG00000015384	Pop1	100	72.195	ENSRBIG00000007996	POP1	100	72.780	Rhinopithecus_bieti
ENSDORG00000015384	Pop1	100	72.070	ENSRROG00000012334	POP1	100	72.656	Rhinopithecus_roxellana
ENSDORG00000015384	Pop1	99	71.838	ENSSBOG00000020830	POP1	100	72.332	Saimiri_boliviensis_boliviensis
ENSDORG00000015384	Pop1	100	61.054	ENSSHAG00000000296	POP1	100	61.054	Sarcophilus_harrisii
ENSDORG00000015384	Pop1	100	42.171	ENSSFOG00015007429	pop1	99	41.555	Scleropages_formosus
ENSDORG00000015384	Pop1	82	46.216	ENSSMAG00000010467	POP1	95	42.995	Scophthalmus_maximus
ENSDORG00000015384	Pop1	100	39.546	ENSSDUG00000007817	POP1	100	40.094	Seriola_dumerili
ENSDORG00000015384	Pop1	100	40.474	ENSSLDG00000012565	POP1	100	40.300	Seriola_lalandi_dorsalis
ENSDORG00000015384	Pop1	100	52.039	ENSSPUG00000003550	-	100	51.163	Sphenodon_punctatus
ENSDORG00000015384	Pop1	100	42.689	ENSSPAG00000014955	pop1	100	42.270	Stegastes_partitus
ENSDORG00000015384	Pop1	100	69.057	ENSSSCG00000006078	POP1	100	69.057	Sus_scrofa
ENSDORG00000015384	Pop1	91	48.319	ENSTGUG00000012011	-	100	48.632	Taeniopygia_guttata
ENSDORG00000015384	Pop1	91	43.237	ENSTRUG00000010856	pop1	95	43.131	Takifugu_rubripes
ENSDORG00000015384	Pop1	93	43.460	ENSTNIG00000013297	pop1	99	43.519	Tetraodon_nigroviridis
ENSDORG00000015384	Pop1	95	68.891	ENSTBEG00000014214	POP1	99	68.891	Tupaia_belangeri
ENSDORG00000015384	Pop1	100	67.575	ENSTTRG00000016071	POP1	100	68.066	Tursiops_truncatus
ENSDORG00000015384	Pop1	99	64.363	ENSUAMG00000017309	POP1	100	64.363	Ursus_americanus
ENSDORG00000015384	Pop1	88	83.436	ENSUMAG00000016952	POP1	100	67.086	Ursus_maritimus
ENSDORG00000015384	Pop1	81	83.621	ENSVPAG00000008278	POP1	82	83.621	Vicugna_pacos
ENSDORG00000015384	Pop1	100	69.133	ENSVVUG00000010994	POP1	100	69.133	Vulpes_vulpes
ENSDORG00000015384	Pop1	100	39.050	ENSXCOG00000017043	POP1	100	39.164	Xiphophorus_couchianus
ENSDORG00000015384	Pop1	100	41.739	ENSXMAG00000002472	POP1	100	41.748	Xiphophorus_maculatus