EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDORG00000015491 (Gene tree)
Gene ID: 105986490
Gene Symbol: Hnrnpu
Alias: Hnrpu|Sp120|scaffold attachment factor A
Full Name: heterogeneous nuclear ribonucleoprotein U
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Plus strand
Length: 9563 bases
Position: chrKN672381.1:1932546-1942108
Accession: 105986490
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000014580	SAP	PF02037.27	1.4e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000015491	-	2364	XM_013017413	ENSDORP00000014580	787 (aa)	XP_012872867	UPI000BAD11C5

Gene Model

Click here to download ENSDORG00000015491's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000015491's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDORG00000015491	Hnrnpu	75	43.980	ENSDORG00000008678	Hnrnpul2	74	43.813

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000015491	Hnrnpu	100	92.060	ENSG00000153187	HNRNPU	100	100.000	Homo_sapiens
ENSDORG00000015491	Hnrnpu	74	57.716	ENSAPOG00000017400	hnrnpub	81	59.133	Acanthochromis_polyacanthus
ENSDORG00000015491	Hnrnpu	100	90.522	ENSAMEG00000009145	HNRNPU	100	90.644	Ailuropoda_melanoleuca
ENSDORG00000015491	Hnrnpu	99	52.536	ENSACIG00000012138	hnrnpub	84	56.422	Amphilophus_citrinellus
ENSDORG00000015491	Hnrnpu	99	52.061	ENSAOCG00000015843	hnrnpub	81	59.288	Amphiprion_ocellaris
ENSDORG00000015491	Hnrnpu	99	52.061	ENSAPEG00000014679	hnrnpub	81	59.288	Amphiprion_percula
ENSDORG00000015491	Hnrnpu	94	55.808	ENSATEG00000016178	hnrnpub	72	59.571	Anabas_testudineus
ENSDORG00000015491	Hnrnpu	100	92.184	ENSANAG00000033895	-	100	92.184	Aotus_nancymaae
ENSDORG00000015491	Hnrnpu	76	59.113	ENSACLG00000008165	hnrnpub	78	58.768	Astatotilapia_calliptera
ENSDORG00000015491	Hnrnpu	100	90.545	ENSBTAG00000007606	HNRNPU	100	90.303	Bos_taurus
ENSDORG00000015491	Hnrnpu	100	90.303	ENSCJAG00000016914	HNRNPU	99	91.090	Callithrix_jacchus
ENSDORG00000015491	Hnrnpu	100	91.935	ENSCAFG00020000918	HNRNPU	100	92.060	Canis_lupus_dingo
ENSDORG00000015491	Hnrnpu	100	92.432	ENSCHIG00000004900	HNRNPU	100	92.432	Capra_hircus
ENSDORG00000015491	Hnrnpu	100	90.998	ENSCPOG00000011887	HNRNPU	100	90.998	Cavia_porcellus
ENSDORG00000015491	Hnrnpu	100	91.656	ENSCCAG00000037859	-	100	91.407	Cebus_capucinus
ENSDORG00000015491	Hnrnpu	100	91.781	ENSCATG00000035273	HNRNPU	100	91.656	Cercocebus_atys
ENSDORG00000015491	Hnrnpu	100	91.119	ENSCLAG00000007100	HNRNPU	100	91.119	Chinchilla_lanigera
ENSDORG00000015491	Hnrnpu	100	92.184	ENSCSAG00000009219	HNRNPU	100	92.060	Chlorocebus_sabaeus
ENSDORG00000015491	Hnrnpu	82	91.667	ENSCHOG00000001387	HNRNPU	79	91.667	Choloepus_hoffmanni
ENSDORG00000015491	Hnrnpu	76	87.809	ENSCPBG00000009415	HNRNPU	98	78.000	Chrysemys_picta_bellii
ENSDORG00000015491	Hnrnpu	100	92.616	ENSCANG00000022780	HNRNPU	100	92.240	Colobus_angolensis_palliatus
ENSDORG00000015491	Hnrnpu	100	93.258	ENSCGRG00001020525	Hnrnpu	100	93.134	Cricetulus_griseus_chok1gshd
ENSDORG00000015491	Hnrnpu	71	65.625	ENSCSEG00000010804	hnrnpub	86	78.261	Cynoglossus_semilaevis
ENSDORG00000015491	Hnrnpu	92	47.082	ENSCVAG00000004280	hnrnpub	77	71.186	Cyprinodon_variegatus
ENSDORG00000015491	Hnrnpu	75	61.538	ENSDARG00000004735	hnrnpub	81	58.904	Danio_rerio
ENSDORG00000015491	Hnrnpu	74	60.033	ENSDARG00000015206	hnrnpua	81	59.325	Danio_rerio
ENSDORG00000015491	Hnrnpu	86	98.355	ENSDNOG00000000215	HNRNPU	92	98.355	Dasypus_novemcinctus
ENSDORG00000015491	Hnrnpu	100	90.943	ENSETEG00000014565	HNRNPU	100	90.470	Echinops_telfairi
ENSDORG00000015491	Hnrnpu	100	92.804	ENSEASG00005003017	HNRNPU	100	92.556	Equus_asinus_asinus
ENSDORG00000015491	Hnrnpu	100	92.184	ENSECAG00000007955	HNRNPU	100	92.556	Equus_caballus
ENSDORG00000015491	Hnrnpu	99	52.070	ENSELUG00000011966	hnrnpua	81	58.525	Esox_lucius
ENSDORG00000015491	Hnrnpu	74	58.321	ENSELUG00000010733	hnrnpub	62	65.814	Esox_lucius
ENSDORG00000015491	Hnrnpu	100	91.925	ENSFCAG00000002156	HNRNPU	99	92.050	Felis_catus
ENSDORG00000015491	Hnrnpu	84	99.158	ENSFDAG00000006026	HNRNPU	100	99.158	Fukomys_damarensis
ENSDORG00000015491	Hnrnpu	74	54.641	ENSFHEG00000022639	hnrnpub	62	59.963	Fundulus_heteroclitus
ENSDORG00000015491	Hnrnpu	74	59.314	ENSGMOG00000001755	hnrnpub	77	60.956	Gadus_morhua
ENSDORG00000015491	Hnrnpu	75	88.333	ENSGALG00000010671	HNRNPU	100	75.765	Gallus_gallus
ENSDORG00000015491	Hnrnpu	74	54.863	ENSGAFG00000009369	hnrnpub	79	55.793	Gambusia_affinis
ENSDORG00000015491	Hnrnpu	74	61.881	ENSGACG00000004679	hnrnpub	73	61.628	Gasterosteus_aculeatus
ENSDORG00000015491	Hnrnpu	100	91.781	ENSGGOG00000004061	HNRNPU	100	91.407	Gorilla_gorilla
ENSDORG00000015491	Hnrnpu	74	58.140	ENSHBUG00000012290	hnrnpub	80	56.231	Haplochromis_burtoni
ENSDORG00000015491	Hnrnpu	100	93.151	ENSHGLG00000010594	-	100	93.151	Heterocephalus_glaber_female
ENSDORG00000015491	Hnrnpu	84	99.496	ENSHGLG00100015093	HNRNPU	100	99.496	Heterocephalus_glaber_male
ENSDORG00000015491	Hnrnpu	74	52.836	ENSHCOG00000020091	hnrnpub	78	54.211	Hippocampus_comes
ENSDORG00000015491	Hnrnpu	74	83.721	ENSIPUG00000007749	hnrnpu	92	68.421	Ictalurus_punctatus
ENSDORG00000015491	Hnrnpu	100	90.743	ENSJJAG00000011371	Hnrnpu	100	90.134	Jaculus_jaculus
ENSDORG00000015491	Hnrnpu	74	55.860	ENSKMAG00000004532	hnrnpub	80	55.105	Kryptolebias_marmoratus
ENSDORG00000015491	Hnrnpu	74	56.728	ENSLBEG00000022520	hnrnpub	80	58.218	Labrus_bergylta
ENSDORG00000015491	Hnrnpu	99	62.593	ENSLACG00000017463	HNRNPU	99	62.252	Latimeria_chalumnae
ENSDORG00000015491	Hnrnpu	75	69.692	ENSLOCG00000016652	hnrnpua	78	65.692	Lepisosteus_oculatus
ENSDORG00000015491	Hnrnpu	100	91.407	ENSLAFG00000021377	HNRNPU	100	90.909	Loxodonta_africana
ENSDORG00000015491	Hnrnpu	100	91.781	ENSMFAG00000037308	HNRNPU	100	91.656	Macaca_fascicularis
ENSDORG00000015491	Hnrnpu	100	92.184	ENSMMUG00000021098	HNRNPU	100	92.060	Macaca_mulatta
ENSDORG00000015491	Hnrnpu	100	91.781	ENSMNEG00000043645	HNRNPU	100	91.656	Macaca_nemestrina
ENSDORG00000015491	Hnrnpu	74	58.525	ENSMAMG00000007196	hnrnpub	80	54.799	Mastacembelus_armatus
ENSDORG00000015491	Hnrnpu	76	59.271	ENSMZEG00005003185	hnrnpub	78	58.926	Maylandia_zebra
ENSDORG00000015491	Hnrnpu	100	92.893	ENSMAUG00000008842	Hnrnpu	100	92.893	Mesocricetus_auratus
ENSDORG00000015491	Hnrnpu	100	91.656	ENSMICG00000004616	HNRNPU	100	91.283	Microcebus_murinus
ENSDORG00000015491	Hnrnpu	100	91.791	ENSMOCG00000015623	Hnrnpu	100	92.289	Microtus_ochrogaster
ENSDORG00000015491	Hnrnpu	100	84.471	ENSMODG00000006515	HNRNPU	100	84.235	Monodelphis_domestica
ENSDORG00000015491	Hnrnpu	71	60.333	ENSMALG00000018243	hnrnpub	70	63.139	Monopterus_albus
ENSDORG00000015491	Hnrnpu	100	92.653	MGP_CAROLIEiJ_G0014962	Hnrnpu	100	92.777	Mus_caroli
ENSDORG00000015491	Hnrnpu	100	92.653	ENSMUSG00000039630	Hnrnpu	100	93.026	Mus_musculus
ENSDORG00000015491	Hnrnpu	100	91.418	MGP_PahariEiJ_G0028193	Hnrnpu	100	92.164	Mus_pahari
ENSDORG00000015491	Hnrnpu	100	92.653	MGP_SPRETEiJ_G0015761	Hnrnpu	100	93.026	Mus_spretus
ENSDORG00000015491	Hnrnpu	100	89.487	ENSMLUG00000000475	HNRNPU	100	90.000	Myotis_lucifugus
ENSDORG00000015491	Hnrnpu	100	93.367	ENSNGAG00000019075	Hnrnpu	100	93.116	Nannospalax_galili
ENSDORG00000015491	Hnrnpu	74	57.944	ENSNBRG00000017855	hnrnpub	80	55.927	Neolamprologus_brichardi
ENSDORG00000015491	Hnrnpu	99	81.643	ENSMEUG00000000541	HNRNPU	100	81.544	Notamacropus_eugenii
ENSDORG00000015491	Hnrnpu	69	99.029	ENSODEG00000014458	-	100	99.029	Octodon_degus
ENSDORG00000015491	Hnrnpu	80	80.851	ENSONIG00000001260	hnrnpub	89	80.851	Oreochromis_niloticus
ENSDORG00000015491	Hnrnpu	98	90.347	ENSOCUG00000014469	HNRNPU	92	89.664	Oryctolagus_cuniculus
ENSDORG00000015491	Hnrnpu	74	57.669	ENSORLG00020005363	hnrnpub	80	54.805	Oryzias_latipes_hni
ENSDORG00000015491	Hnrnpu	74	57.515	ENSORLG00015001190	hnrnpub	80	54.655	Oryzias_latipes_hsok
ENSDORG00000015491	Hnrnpu	74	55.856	ENSOMEG00000014951	hnrnpub	81	57.231	Oryzias_melastigma
ENSDORG00000015491	Hnrnpu	100	91.811	ENSOGAG00000014024	HNRNPU	100	91.315	Otolemur_garnettii
ENSDORG00000015491	Hnrnpu	79	96.308	ENSOARG00000004985	HNRNPU	83	97.073	Ovis_aries
ENSDORG00000015491	Hnrnpu	100	91.781	ENSPPAG00000038652	HNRNPU	100	91.656	Pan_paniscus
ENSDORG00000015491	Hnrnpu	100	89.939	ENSPPRG00000002662	HNRNPU	100	89.818	Panthera_pardus
ENSDORG00000015491	Hnrnpu	100	91.781	ENSPTRG00000002182	HNRNPU	100	91.656	Pan_troglodytes
ENSDORG00000015491	Hnrnpu	100	92.184	ENSPANG00000011643	HNRNPU	100	92.060	Papio_anubis
ENSDORG00000015491	Hnrnpu	75	65.760	ENSPKIG00000006885	hnrnpua	78	66.667	Paramormyrops_kingsleyae
ENSDORG00000015491	Hnrnpu	99	59.129	ENSPKIG00000022332	hnrnpub	78	67.252	Paramormyrops_kingsleyae
ENSDORG00000015491	Hnrnpu	100	85.680	ENSPCIG00000008657	HNRNPU	100	85.442	Phascolarctos_cinereus
ENSDORG00000015491	Hnrnpu	74	54.863	ENSPFOG00000002908	hnrnpub	80	55.793	Poecilia_formosa
ENSDORG00000015491	Hnrnpu	74	55.319	ENSPLAG00000004160	hnrnpub	80	55.963	Poecilia_latipinna
ENSDORG00000015491	Hnrnpu	100	88.529	ENSPCOG00000003883	-	100	86.914	Propithecus_coquereli
ENSDORG00000015491	Hnrnpu	100	91.584	ENSPCOG00000018655	-	100	90.965	Propithecus_coquereli
ENSDORG00000015491	Hnrnpu	100	89.818	ENSPVAG00000002581	HNRNPU	100	89.697	Pteropus_vampyrus
ENSDORG00000015491	Hnrnpu	74	58.567	ENSPNYG00000021642	hnrnpub	80	56.383	Pundamilia_nyererei
ENSDORG00000015491	Hnrnpu	99	58.000	ENSPNAG00000001055	hnrnpub	79	64.082	Pygocentrus_nattereri
ENSDORG00000015491	Hnrnpu	100	92.634	ENSRNOG00000033790	Hnrnpu	100	93.134	Rattus_norvegicus
ENSDORG00000015491	Hnrnpu	100	91.283	ENSRBIG00000031519	HNRNPU	100	91.158	Rhinopithecus_bieti
ENSDORG00000015491	Hnrnpu	100	92.060	ENSRROG00000041642	HNRNPU	100	91.935	Rhinopithecus_roxellana
ENSDORG00000015491	Hnrnpu	99	58.920	ENSSFOG00015001124	hnrnpub	79	63.348	Scleropages_formosus
ENSDORG00000015491	Hnrnpu	99	57.459	ENSSFOG00015019004	hnrnpu	77	67.572	Scleropages_formosus
ENSDORG00000015491	Hnrnpu	74	55.940	ENSSDUG00000005912	hnrnpub	79	56.437	Seriola_dumerili
ENSDORG00000015491	Hnrnpu	74	55.789	ENSSLDG00000004899	hnrnpub	79	56.287	Seriola_lalandi_dorsalis
ENSDORG00000015491	Hnrnpu	100	77.043	ENSSPUG00000011393	HNRNPU	100	77.670	Sphenodon_punctatus
ENSDORG00000015491	Hnrnpu	94	54.072	ENSSPAG00000011853	hnrnpub	99	50.806	Stegastes_partitus
ENSDORG00000015491	Hnrnpu	100	91.811	ENSSSCG00000010877	HNRNPU	100	92.184	Sus_scrofa
ENSDORG00000015491	Hnrnpu	99	49.767	ENSTRUG00000007759	hnrnpub	79	57.895	Takifugu_rubripes
ENSDORG00000015491	Hnrnpu	99	50.000	ENSTNIG00000009725	hnrnpub	90	79.070	Tetraodon_nigroviridis
ENSDORG00000015491	Hnrnpu	69	100.000	ENSTTRG00000005281	HNRNPU	71	100.000	Tursiops_truncatus
ENSDORG00000015491	Hnrnpu	100	91.024	ENSUAMG00000021120	HNRNPU	100	91.069	Ursus_americanus
ENSDORG00000015491	Hnrnpu	99	87.548	ENSUMAG00000012322	HNRNPU	96	94.671	Ursus_maritimus
ENSDORG00000015491	Hnrnpu	81	93.233	ENSVPAG00000010520	HNRNPU	90	93.233	Vicugna_pacos
ENSDORG00000015491	Hnrnpu	100	91.935	ENSVVUG00000026524	HNRNPU	100	92.060	Vulpes_vulpes
ENSDORG00000015491	Hnrnpu	99	66.303	ENSXETG00000011386	hnrnpu	79	90.909	Xenopus_tropicalis
ENSDORG00000015491	Hnrnpu	74	55.167	ENSXMAG00000010356	hnrnpub	80	56.098	Xiphophorus_maculatus