EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDORG00000016109 (Gene tree)
Gene ID: -
Gene Symbol: Pnkd
Alias: 2210013N15Rik|2810403H05Rik|Brp17
Full Name: PNKD%2C MBL domain containing
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Plus strand
Length: 56015 bases
Position: chrKN672347.1:52094755-52150769
Accession: 105980697
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000015152	Lactamase_B	PF00753.27	1.2e-10	1	1
ENSDORP00000026221	Lactamase_B	PF00753.27	1.4e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000027344	-	1278	-	ENSDORP00000026221	426 (aa)	-	UPI000BAD14B1
ENSDORT00000016109	-	1164	XM_013009596	ENSDORP00000015152	387 (aa)	XP_012865050	UPI00018AB362

Gene Model

Click here to download ENSDORG00000016109's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000016109's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDORG00000016109	Pnkd	61	43.933	ENSDORG00000009673	Hagh	80	45.175

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000016109	Pnkd	100	96.124	ENSG00000127838	PNKD	100	96.124	Homo_sapiens
ENSDORG00000016109	Pnkd	83	60.748	ENSAPOG00000019072	pnkd	88	60.436	Acanthochromis_polyacanthus
ENSDORG00000016109	Pnkd	100	95.607	ENSAMEG00000003089	PNKD	100	95.090	Ailuropoda_melanoleuca
ENSDORG00000016109	Pnkd	97	54.278	ENSACIG00000015359	pnkd	96	54.011	Amphilophus_citrinellus
ENSDORG00000016109	Pnkd	83	60.436	ENSAOCG00000011458	-	88	60.125	Amphiprion_ocellaris
ENSDORG00000016109	Pnkd	76	57.860	ENSAOCG00000024159	pnkd	78	63.359	Amphiprion_ocellaris
ENSDORG00000016109	Pnkd	83	60.436	ENSAPEG00000011710	pnkd	88	60.125	Amphiprion_percula
ENSDORG00000016109	Pnkd	83	60.125	ENSATEG00000002727	pnkd	90	59.813	Anabas_testudineus
ENSDORG00000016109	Pnkd	85	60.606	ENSACAG00000001617	PNKD	99	56.486	Anolis_carolinensis
ENSDORG00000016109	Pnkd	100	96.124	ENSANAG00000019661	PNKD	100	96.124	Aotus_nancymaae
ENSDORG00000016109	Pnkd	83	60.748	ENSACLG00000021665	pnkd	88	60.748	Astatotilapia_calliptera
ENSDORG00000016109	Pnkd	80	63.057	ENSAMXG00000043305	pnkd	86	62.739	Astyanax_mexicanus
ENSDORG00000016109	Pnkd	83	92.523	ENSBTAG00000003936	PNKD	98	85.028	Bos_taurus
ENSDORG00000016109	Pnkd	100	96.124	ENSCJAG00000010820	PNKD	100	96.124	Callithrix_jacchus
ENSDORG00000016109	Pnkd	100	93.540	ENSCAFG00000014632	PNKD	100	93.023	Canis_familiaris
ENSDORG00000016109	Pnkd	83	92.835	ENSCAFG00020027093	PNKD	97	84.874	Canis_lupus_dingo
ENSDORG00000016109	Pnkd	100	95.090	ENSCHIG00000002862	PNKD	100	94.315	Capra_hircus
ENSDORG00000016109	Pnkd	100	96.124	ENSTSYG00000034863	PNKD	100	96.124	Carlito_syrichta
ENSDORG00000016109	Pnkd	100	96.641	ENSCPOG00000020589	PNKD	100	96.641	Cavia_porcellus
ENSDORG00000016109	Pnkd	100	95.866	ENSCCAG00000036713	PNKD	100	95.866	Cebus_capucinus
ENSDORG00000016109	Pnkd	100	96.382	ENSCATG00000041188	PNKD	100	96.382	Cercocebus_atys
ENSDORG00000016109	Pnkd	100	96.899	ENSCLAG00000012048	PNKD	100	96.899	Chinchilla_lanigera
ENSDORG00000016109	Pnkd	100	96.382	ENSCSAG00000008892	PNKD	100	96.382	Chlorocebus_sabaeus
ENSDORG00000016109	Pnkd	100	96.382	ENSCANG00000032283	PNKD	100	96.382	Colobus_angolensis_palliatus
ENSDORG00000016109	Pnkd	100	96.124	ENSCGRG00001024071	Pnkd	100	96.124	Cricetulus_griseus_chok1gshd
ENSDORG00000016109	Pnkd	99	94.090	ENSCGRG00000005443	Pnkd	100	93.617	Cricetulus_griseus_crigri
ENSDORG00000016109	Pnkd	83	58.255	ENSCSEG00000013958	pnkd	99	54.039	Cynoglossus_semilaevis
ENSDORG00000016109	Pnkd	83	60.748	ENSCVAG00000005723	pnkd	99	56.267	Cyprinodon_variegatus
ENSDORG00000016109	Pnkd	83	59.938	ENSDARG00000071032	pnkd	88	59.627	Danio_rerio
ENSDORG00000016109	Pnkd	79	96.743	ENSDNOG00000046154	PNKD	86	86.857	Dasypus_novemcinctus
ENSDORG00000016109	Pnkd	100	65.553	ENSETEG00000014587	PNKD	100	65.553	Echinops_telfairi
ENSDORG00000016109	Pnkd	78	53.795	ENSEBUG00000013857	pnkd	97	53.937	Eptatretus_burgeri
ENSDORG00000016109	Pnkd	80	95.455	ENSEASG00005012391	PNKD	85	94.805	Equus_asinus_asinus
ENSDORG00000016109	Pnkd	100	94.832	ENSECAG00000013322	PNKD	100	94.315	Equus_caballus
ENSDORG00000016109	Pnkd	83	58.879	ENSELUG00000015007	pnkd	91	56.250	Esox_lucius
ENSDORG00000016109	Pnkd	83	92.835	ENSFCAG00000002373	PNKD	97	86.402	Felis_catus
ENSDORG00000016109	Pnkd	79	62.866	ENSFALG00000004028	PNKD	91	62.866	Ficedula_albicollis
ENSDORG00000016109	Pnkd	100	97.158	ENSFDAG00000012326	PNKD	100	97.158	Fukomys_damarensis
ENSDORG00000016109	Pnkd	83	60.748	ENSFHEG00000010999	pnkd	85	60.436	Fundulus_heteroclitus
ENSDORG00000016109	Pnkd	83	58.879	ENSGMOG00000009565	pnkd	88	58.879	Gadus_morhua
ENSDORG00000016109	Pnkd	79	62.866	ENSGALG00000022166	PNKD	99	61.859	Gallus_gallus
ENSDORG00000016109	Pnkd	83	61.059	ENSGAFG00000013942	pnkd	79	60.748	Gambusia_affinis
ENSDORG00000016109	Pnkd	82	61.076	ENSGACG00000007119	pnkd	87	60.759	Gasterosteus_aculeatus
ENSDORG00000016109	Pnkd	80	62.338	ENSGAGG00000017234	PNKD	96	62.338	Gopherus_agassizii
ENSDORG00000016109	Pnkd	100	96.124	ENSGGOG00000006892	PNKD	100	96.124	Gorilla_gorilla
ENSDORG00000016109	Pnkd	83	60.748	ENSHBUG00000001234	pnkd	88	60.748	Haplochromis_burtoni
ENSDORG00000016109	Pnkd	100	96.124	ENSHGLG00000013971	PNKD	100	96.124	Heterocephalus_glaber_female
ENSDORG00000016109	Pnkd	100	96.124	ENSHGLG00100005225	PNKD	100	96.124	Heterocephalus_glaber_male
ENSDORG00000016109	Pnkd	82	61.076	ENSHCOG00000018894	pnkd	87	60.759	Hippocampus_comes
ENSDORG00000016109	Pnkd	80	64.401	ENSIPUG00000013907	pnkd	99	64.078	Ictalurus_punctatus
ENSDORG00000016109	Pnkd	100	97.418	ENSSTOG00000024593	PNKD	100	97.418	Ictidomys_tridecemlineatus
ENSDORG00000016109	Pnkd	100	97.158	ENSJJAG00000023559	Pnkd	100	97.158	Jaculus_jaculus
ENSDORG00000016109	Pnkd	83	60.125	ENSKMAG00000014879	pnkd	88	59.813	Kryptolebias_marmoratus
ENSDORG00000016109	Pnkd	83	60.125	ENSLBEG00000000985	pnkd	88	59.813	Labrus_bergylta
ENSDORG00000016109	Pnkd	83	60.436	ENSLOCG00000000821	pnkd	88	60.436	Lepisosteus_oculatus
ENSDORG00000016109	Pnkd	100	93.897	ENSLAFG00000007427	PNKD	100	93.662	Loxodonta_africana
ENSDORG00000016109	Pnkd	100	96.382	ENSMFAG00000038281	PNKD	100	96.382	Macaca_fascicularis
ENSDORG00000016109	Pnkd	85	96.951	ENSMNEG00000041541	PNKD	100	97.468	Macaca_nemestrina
ENSDORG00000016109	Pnkd	100	96.382	ENSMLEG00000042812	PNKD	100	96.382	Mandrillus_leucophaeus
ENSDORG00000016109	Pnkd	83	60.436	ENSMAMG00000017212	pnkd	99	56.267	Mastacembelus_armatus
ENSDORG00000016109	Pnkd	77	62.290	ENSMZEG00005012514	pnkd	100	62.290	Maylandia_zebra
ENSDORG00000016109	Pnkd	50	50.909	ENSMGAG00000011524	PNKD	100	55.357	Meleagris_gallopavo
ENSDORG00000016109	Pnkd	80	96.429	ENSMAUG00000013099	Pnkd	97	86.402	Mesocricetus_auratus
ENSDORG00000016109	Pnkd	100	96.641	ENSMICG00000042547	PNKD	100	96.641	Microcebus_murinus
ENSDORG00000016109	Pnkd	100	96.392	ENSMOCG00000007956	Pnkd	100	96.392	Microtus_ochrogaster
ENSDORG00000016109	Pnkd	80	62.460	ENSMMOG00000005679	pnkd	89	62.136	Mola_mola
ENSDORG00000016109	Pnkd	81	79.808	ENSMODG00000015497	PNKD	87	79.487	Monodelphis_domestica
ENSDORG00000016109	Pnkd	83	61.371	ENSMALG00000005967	pnkd	79	61.059	Monopterus_albus
ENSDORG00000016109	Pnkd	100	96.382	MGP_CAROLIEiJ_G0014258	Pnkd	100	96.382	Mus_caroli
ENSDORG00000016109	Pnkd	100	96.641	ENSMUSG00000026179	Pnkd	100	96.641	Mus_musculus
ENSDORG00000016109	Pnkd	100	96.641	MGP_PahariEiJ_G0027496	Pnkd	100	96.641	Mus_pahari
ENSDORG00000016109	Pnkd	100	96.382	MGP_SPRETEiJ_G0015064	Pnkd	100	96.382	Mus_spretus
ENSDORG00000016109	Pnkd	83	93.146	ENSMPUG00000016531	PNKD	97	86.686	Mustela_putorius_furo
ENSDORG00000016109	Pnkd	80	95.779	ENSMLUG00000004125	PNKD	100	95.779	Myotis_lucifugus
ENSDORG00000016109	Pnkd	100	96.382	ENSNGAG00000014980	Pnkd	100	96.382	Nannospalax_galili
ENSDORG00000016109	Pnkd	80	62.058	ENSNBRG00000020031	pnkd	96	62.058	Neolamprologus_brichardi
ENSDORG00000016109	Pnkd	100	73.902	ENSMEUG00000011266	PNKD	100	73.643	Notamacropus_eugenii
ENSDORG00000016109	Pnkd	87	93.155	ENSODEG00000009734	PNKD	97	88.385	Octodon_degus
ENSDORG00000016109	Pnkd	83	60.125	ENSONIG00000004389	pnkd	88	60.125	Oreochromis_niloticus
ENSDORG00000016109	Pnkd	100	94.131	ENSOCUG00000023754	PNKD	100	93.427	Oryctolagus_cuniculus
ENSDORG00000016109	Pnkd	82	60.127	ENSORLG00000026276	pnkd	96	56.000	Oryzias_latipes
ENSDORG00000016109	Pnkd	82	60.127	ENSORLG00020008373	pnkd	97	61.716	Oryzias_latipes_hni
ENSDORG00000016109	Pnkd	82	60.127	ENSORLG00015005276	pnkd	96	56.000	Oryzias_latipes_hsok
ENSDORG00000016109	Pnkd	82	60.443	ENSOMEG00000016106	pnkd	97	56.286	Oryzias_melastigma
ENSDORG00000016109	Pnkd	80	98.052	ENSOGAG00000001792	PNKD	100	98.052	Otolemur_garnettii
ENSDORG00000016109	Pnkd	100	95.349	ENSOARG00000019505	PNKD	100	94.574	Ovis_aries
ENSDORG00000016109	Pnkd	100	96.124	ENSPPAG00000034969	PNKD	100	96.124	Pan_paniscus
ENSDORG00000016109	Pnkd	83	92.835	ENSPPRG00000023720	PNKD	97	86.119	Panthera_pardus
ENSDORG00000016109	Pnkd	100	88.630	ENSPTIG00000021040	PNKD	100	88.372	Panthera_tigris_altaica
ENSDORG00000016109	Pnkd	100	95.866	ENSPTRG00000012914	PNKD	100	95.866	Pan_troglodytes
ENSDORG00000016109	Pnkd	100	96.382	ENSPANG00000005752	PNKD	100	96.382	Papio_anubis
ENSDORG00000016109	Pnkd	83	58.879	ENSPKIG00000011208	pnkd	99	58.567	Paramormyrops_kingsleyae
ENSDORG00000016109	Pnkd	80	60.065	ENSPMGG00000005169	pnkd	100	59.740	Periophthalmus_magnuspinnatus
ENSDORG00000016109	Pnkd	100	95.866	ENSPEMG00000010689	Pnkd	100	95.607	Peromyscus_maniculatus_bairdii
ENSDORG00000016109	Pnkd	80	55.340	ENSPMAG00000006947	pnkd	99	54.870	Petromyzon_marinus
ENSDORG00000016109	Pnkd	80	80.195	ENSPCIG00000021457	PNKD	97	71.309	Phascolarctos_cinereus
ENSDORG00000016109	Pnkd	82	61.709	ENSPFOG00000010628	pnkd	95	58.551	Poecilia_formosa
ENSDORG00000016109	Pnkd	58	64.732	ENSPLAG00000020583	pnkd	95	60.474	Poecilia_latipinna
ENSDORG00000016109	Pnkd	67	64.093	ENSPMEG00000006542	pnkd	73	60.417	Poecilia_mexicana
ENSDORG00000016109	Pnkd	82	61.076	ENSPREG00000014434	pnkd	95	57.558	Poecilia_reticulata
ENSDORG00000016109	Pnkd	100	96.124	ENSPPYG00000013167	PNKD	100	96.124	Pongo_abelii
ENSDORG00000016109	Pnkd	100	76.486	ENSPCAG00000003946	PNKD	100	75.969	Procavia_capensis
ENSDORG00000016109	Pnkd	100	97.416	ENSPCOG00000019839	PNKD	100	97.416	Propithecus_coquereli
ENSDORG00000016109	Pnkd	83	60.748	ENSPNYG00000016327	pnkd	99	60.748	Pundamilia_nyererei
ENSDORG00000016109	Pnkd	80	63.694	ENSPNAG00000008655	pnkd	97	58.192	Pygocentrus_nattereri
ENSDORG00000016109	Pnkd	100	96.382	ENSRNOG00000014806	Pnkd	100	96.382	Rattus_norvegicus
ENSDORG00000016109	Pnkd	100	96.382	ENSRBIG00000031614	PNKD	100	96.382	Rhinopithecus_bieti
ENSDORG00000016109	Pnkd	100	96.382	ENSRROG00000045542	PNKD	100	96.382	Rhinopithecus_roxellana
ENSDORG00000016109	Pnkd	100	95.607	ENSSBOG00000036000	PNKD	100	95.090	Saimiri_boliviensis_boliviensis
ENSDORG00000016109	Pnkd	80	80.386	ENSSHAG00000016339	PNKD	96	80.064	Sarcophilus_harrisii
ENSDORG00000016109	Pnkd	80	63.961	ENSSFOG00015013028	pnkd	82	63.636	Scleropages_formosus
ENSDORG00000016109	Pnkd	83	60.748	ENSSMAG00000006812	pnkd	88	60.436	Scophthalmus_maximus
ENSDORG00000016109	Pnkd	83	59.813	ENSSDUG00000012538	pnkd	88	59.502	Seriola_dumerili
ENSDORG00000016109	Pnkd	83	59.813	ENSSLDG00000021431	pnkd	85	59.502	Seriola_lalandi_dorsalis
ENSDORG00000016109	Pnkd	80	52.597	ENSSPUG00000018454	PNKD	98	52.597	Sphenodon_punctatus
ENSDORG00000016109	Pnkd	83	60.436	ENSSPAG00000007083	pnkd	88	60.125	Stegastes_partitus
ENSDORG00000016109	Pnkd	100	97.003	ENSSSCG00000029002	PNKD	100	96.519	Sus_scrofa
ENSDORG00000016109	Pnkd	83	58.567	ENSTRUG00000009399	pnkd	88	58.255	Takifugu_rubripes
ENSDORG00000016109	Pnkd	83	58.879	ENSTNIG00000010992	pnkd	85	60.390	Tetraodon_nigroviridis
ENSDORG00000016109	Pnkd	100	93.540	ENSTTRG00000012895	PNKD	100	93.282	Tursiops_truncatus
ENSDORG00000016109	Pnkd	83	93.146	ENSUAMG00000000289	PNKD	85	96.104	Ursus_americanus
ENSDORG00000016109	Pnkd	100	79.328	ENSUMAG00000019639	PNKD	100	79.328	Ursus_maritimus
ENSDORG00000016109	Pnkd	100	95.708	ENSVVUG00000007348	PNKD	100	95.607	Vulpes_vulpes
ENSDORG00000016109	Pnkd	80	64.610	ENSXETG00000014931	pnkd	99	64.309	Xenopus_tropicalis
ENSDORG00000016109	Pnkd	78	63.696	ENSXCOG00000014370	pnkd	93	63.366	Xiphophorus_couchianus