EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSDORG00000016190 (Gene tree)
Gene ID: 105991356
Gene Symbol: Frg1
Alias: -
Full Name: FSHD region gene 1
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Plus strand
Length: 27188 bases
Position: chrKN672350.1:19148487-19175674
Accession: 105991356
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000015230	FRG1	PF06229.12	8.4e-60	1	2
ENSDORP00000015230	FRG1	PF06229.12	8.4e-60	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000016189	-	720	XM_013023989	ENSDORP00000015230	239 (aa)	XP_012879443	UPI000BAD20A4

Gene Model

Click here to download ENSDORG00000016190's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000016190's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000016190	Frg1	100	84.884	ENSG00000109536	FRG1	100	98.276	Homo_sapiens
ENSDORG00000016190	Frg1	100	63.953	ENSAPOG00000001060	frg1	100	62.791	Acanthochromis_polyacanthus
ENSDORG00000016190	Frg1	100	86.047	ENSAMEG00000013503	FRG1	100	86.047	Ailuropoda_melanoleuca
ENSDORG00000016190	Frg1	85	65.919	ENSACIG00000022283	frg1	98	65.753	Amphilophus_citrinellus
ENSDORG00000016190	Frg1	85	65.022	ENSAOCG00000024240	frg1	85	64.840	Amphiprion_ocellaris
ENSDORG00000016190	Frg1	100	62.791	ENSAPEG00000002486	frg1	100	62.403	Amphiprion_percula
ENSDORG00000016190	Frg1	100	61.240	ENSATEG00000010414	frg1	100	60.853	Anabas_testudineus
ENSDORG00000016190	Frg1	100	77.519	ENSAPLG00000007785	-	100	74.419	Anas_platyrhynchos
ENSDORG00000016190	Frg1	100	71.705	ENSACAG00000006877	-	100	69.380	Anolis_carolinensis
ENSDORG00000016190	Frg1	100	83.721	ENSANAG00000020876	FRG1	100	82.946	Aotus_nancymaae
ENSDORG00000016190	Frg1	100	57.088	ENSACLG00000027065	frg1	100	57.088	Astatotilapia_calliptera
ENSDORG00000016190	Frg1	100	62.016	ENSAMXG00000032700	frg1	100	62.016	Astyanax_mexicanus
ENSDORG00000016190	Frg1	100	86.047	ENSBTAG00000007089	FRG1	100	86.047	Bos_taurus
ENSDORG00000016190	Frg1	99	37.132	WBGene00014177	frg-1	82	38.326	Caenorhabditis_elegans
ENSDORG00000016190	Frg1	100	83.721	ENSCJAG00000011272	FRG1	100	82.946	Callithrix_jacchus
ENSDORG00000016190	Frg1	100	86.047	ENSCAFG00000007135	FRG1	100	86.047	Canis_familiaris
ENSDORG00000016190	Frg1	81	84.977	ENSCAFG00020000082	-	85	84.977	Canis_lupus_dingo
ENSDORG00000016190	Frg1	100	86.047	ENSCHIG00000011585	-	100	86.047	Capra_hircus
ENSDORG00000016190	Frg1	98	67.932	ENSTSYG00000031599	-	100	67.932	Carlito_syrichta
ENSDORG00000016190	Frg1	87	84.649	ENSCAPG00000016056	-	90	85.000	Cavia_aperea
ENSDORG00000016190	Frg1	100	84.496	ENSCPOG00000022277	-	100	81.783	Cavia_porcellus
ENSDORG00000016190	Frg1	100	83.721	ENSCCAG00000024627	FRG1	100	82.946	Cebus_capucinus
ENSDORG00000016190	Frg1	100	84.884	ENSCATG00000029230	FRG1	100	84.884	Cercocebus_atys
ENSDORG00000016190	Frg1	100	59.504	ENSCLAG00000006068	-	100	58.506	Chinchilla_lanigera
ENSDORG00000016190	Frg1	99	71.610	ENSCLAG00000009263	-	100	69.915	Chinchilla_lanigera
ENSDORG00000016190	Frg1	100	74.603	ENSCLAG00000004960	-	100	74.206	Chinchilla_lanigera
ENSDORG00000016190	Frg1	100	84.496	ENSCLAG00000000370	-	100	82.171	Chinchilla_lanigera
ENSDORG00000016190	Frg1	82	79.070	ENSCSAG00000017729	-	100	79.070	Chlorocebus_sabaeus
ENSDORG00000016190	Frg1	100	84.884	ENSCSAG00000002899	FRG1	100	84.884	Chlorocebus_sabaeus
ENSDORG00000016190	Frg1	86	76.000	ENSCPBG00000009211	-	85	76.256	Chrysemys_picta_bellii
ENSDORG00000016190	Frg1	99	47.761	ENSCING00000005161	-	82	50.909	Ciona_intestinalis
ENSDORG00000016190	Frg1	55	55.303	ENSCSAVG00000008018	-	72	55.303	Ciona_savignyi
ENSDORG00000016190	Frg1	100	84.884	ENSCANG00000020991	FRG1	100	84.884	Colobus_angolensis_palliatus
ENSDORG00000016190	Frg1	100	84.496	ENSCGRG00001014998	Frg1	100	84.496	Cricetulus_griseus_chok1gshd
ENSDORG00000016190	Frg1	100	73.222	ENSCGRG00000003902	-	96	71.967	Cricetulus_griseus_crigri
ENSDORG00000016190	Frg1	100	84.496	ENSCGRG00000011860	-	100	84.496	Cricetulus_griseus_crigri
ENSDORG00000016190	Frg1	95	56.680	ENSCSEG00000015950	frg1	100	56.680	Cynoglossus_semilaevis
ENSDORG00000016190	Frg1	100	61.628	ENSCVAG00000009985	frg1	100	61.628	Cyprinodon_variegatus
ENSDORG00000016190	Frg1	100	64.729	ENSDARG00000056504	frg1	100	63.953	Danio_rerio
ENSDORG00000016190	Frg1	100	85.271	ENSDNOG00000014886	FRG1	100	85.271	Dasypus_novemcinctus
ENSDORG00000016190	Frg1	82	47.196	FBgn0036964	FRG1	81	47.196	Drosophila_melanogaster
ENSDORG00000016190	Frg1	100	84.109	ENSETEG00000012349	-	100	84.109	Echinops_telfairi
ENSDORG00000016190	Frg1	54	41.892	ENSEBUG00000012359	FRG1	70	49.123	Eptatretus_burgeri
ENSDORG00000016190	Frg1	52	62.903	ENSEBUG00000014053	frg1	64	64.407	Eptatretus_burgeri
ENSDORG00000016190	Frg1	100	83.333	ENSEASG00005017497	FRG1	100	82.171	Equus_asinus_asinus
ENSDORG00000016190	Frg1	100	83.333	ENSECAG00000003122	FRG1	100	82.171	Equus_caballus
ENSDORG00000016190	Frg1	58	79.618	ENSEEUG00000000145	-	100	79.618	Erinaceus_europaeus
ENSDORG00000016190	Frg1	100	62.791	ENSELUG00000021712	frg1	100	62.016	Esox_lucius
ENSDORG00000016190	Frg1	100	86.047	ENSFCAG00000025737	FRG1	100	86.047	Felis_catus
ENSDORG00000016190	Frg1	85	75.785	ENSFALG00000011231	-	85	76.712	Ficedula_albicollis
ENSDORG00000016190	Frg1	100	81.967	ENSFDAG00000012697	-	100	81.967	Fukomys_damarensis
ENSDORG00000016190	Frg1	100	84.109	ENSFDAG00000000962	-	100	81.783	Fukomys_damarensis
ENSDORG00000016190	Frg1	100	61.628	ENSFHEG00000010540	frg1	100	61.240	Fundulus_heteroclitus
ENSDORG00000016190	Frg1	100	61.628	ENSGMOG00000000867	frg1	100	61.240	Gadus_morhua
ENSDORG00000016190	Frg1	100	75.194	ENSGALG00000013590	-	100	73.256	Gallus_gallus
ENSDORG00000016190	Frg1	75	70.000	ENSGAFG00000013855	frg1	89	63.830	Gambusia_affinis
ENSDORG00000016190	Frg1	100	64.341	ENSGACG00000016888	frg1	100	62.016	Gasterosteus_aculeatus
ENSDORG00000016190	Frg1	100	75.581	ENSGAGG00000025012	-	100	73.256	Gopherus_agassizii
ENSDORG00000016190	Frg1	100	53.488	ENSGGOG00000040796	-	100	53.488	Gorilla_gorilla
ENSDORG00000016190	Frg1	59	85.816	ENSGGOG00000012888	-	71	85.816	Gorilla_gorilla
ENSDORG00000016190	Frg1	100	62.016	ENSHBUG00000010667	frg1	100	61.628	Haplochromis_burtoni
ENSDORG00000016190	Frg1	100	84.109	ENSHGLG00000005601	FRG1	100	81.008	Heterocephalus_glaber_female
ENSDORG00000016190	Frg1	99	78.988	ENSHGLG00000020943	-	99	75.875	Heterocephalus_glaber_female
ENSDORG00000016190	Frg1	99	77.821	ENSHGLG00000020402	-	94	77.432	Heterocephalus_glaber_female
ENSDORG00000016190	Frg1	100	68.605	ENSHGLG00000001211	-	100	68.605	Heterocephalus_glaber_female
ENSDORG00000016190	Frg1	100	83.721	ENSHGLG00100016261	-	100	80.620	Heterocephalus_glaber_male
ENSDORG00000016190	Frg1	100	63.953	ENSHGLG00100015285	-	100	63.953	Heterocephalus_glaber_male
ENSDORG00000016190	Frg1	99	78.988	ENSHGLG00100021211	-	99	75.875	Heterocephalus_glaber_male
ENSDORG00000016190	Frg1	100	68.992	ENSHGLG00100010674	-	100	68.992	Heterocephalus_glaber_male
ENSDORG00000016190	Frg1	85	62.332	ENSHCOG00000000224	frg1	94	62.727	Hippocampus_comes
ENSDORG00000016190	Frg1	100	65.504	ENSIPUG00000022716	frg1	100	65.116	Ictalurus_punctatus
ENSDORG00000016190	Frg1	100	84.884	ENSSTOG00000002857	-	100	84.884	Ictidomys_tridecemlineatus
ENSDORG00000016190	Frg1	100	85.271	ENSJJAG00000020625	Frg1	100	85.271	Jaculus_jaculus
ENSDORG00000016190	Frg1	100	61.628	ENSKMAG00000005841	frg1	100	61.628	Kryptolebias_marmoratus
ENSDORG00000016190	Frg1	100	61.240	ENSLBEG00000001466	frg1	100	60.853	Labrus_bergylta
ENSDORG00000016190	Frg1	100	60.687	ENSLACG00000010243	frg1	100	60.305	Latimeria_chalumnae
ENSDORG00000016190	Frg1	100	65.116	ENSLOCG00000013868	frg1	100	65.116	Lepisosteus_oculatus
ENSDORG00000016190	Frg1	100	85.659	ENSLAFG00000011191	FRG1	98	89.617	Loxodonta_africana
ENSDORG00000016190	Frg1	100	84.884	ENSMFAG00000031178	FRG1	100	84.884	Macaca_fascicularis
ENSDORG00000016190	Frg1	81	74.884	ENSMFAG00000042873	-	89	74.884	Macaca_fascicularis
ENSDORG00000016190	Frg1	100	84.884	ENSMMUG00000001824	FRG1	100	84.884	Macaca_mulatta
ENSDORG00000016190	Frg1	77	74.020	ENSMMUG00000047496	-	88	74.020	Macaca_mulatta
ENSDORG00000016190	Frg1	95	77.733	ENSMNEG00000018620	FRG1	100	77.733	Macaca_nemestrina
ENSDORG00000016190	Frg1	100	84.884	ENSMLEG00000028881	FRG1	100	84.884	Mandrillus_leucophaeus
ENSDORG00000016190	Frg1	100	64.341	ENSMAMG00000012406	frg1	100	63.953	Mastacembelus_armatus
ENSDORG00000016190	Frg1	100	61.628	ENSMZEG00005007549	frg1	100	61.240	Maylandia_zebra
ENSDORG00000016190	Frg1	100	75.194	ENSMGAG00000011481	-	100	73.256	Meleagris_gallopavo
ENSDORG00000016190	Frg1	100	84.884	ENSMAUG00000000847	Frg1	100	84.884	Mesocricetus_auratus
ENSDORG00000016190	Frg1	100	85.659	ENSMICG00000046816	FRG1	100	85.659	Microcebus_murinus
ENSDORG00000016190	Frg1	100	77.519	ENSMOCG00000023000	Frg1	100	77.132	Microtus_ochrogaster
ENSDORG00000016190	Frg1	85	63.229	ENSMMOG00000004008	frg1	93	63.470	Mola_mola
ENSDORG00000016190	Frg1	100	79.845	ENSMODG00000019031	-	87	79.845	Monodelphis_domestica
ENSDORG00000016190	Frg1	100	63.178	ENSMALG00000018497	frg1	100	62.016	Monopterus_albus
ENSDORG00000016190	Frg1	100	84.884	MGP_CAROLIEiJ_G0031006	Frg1	100	84.884	Mus_caroli
ENSDORG00000016190	Frg1	100	84.884	ENSMUSG00000031590	Frg1	100	84.884	Mus_musculus
ENSDORG00000016190	Frg1	100	84.496	MGP_PahariEiJ_G0021475	Frg1	100	84.496	Mus_pahari
ENSDORG00000016190	Frg1	100	84.884	MGP_SPRETEiJ_G0032120	Frg1	100	84.884	Mus_spretus
ENSDORG00000016190	Frg1	100	86.047	ENSMPUG00000017962	FRG1	100	86.047	Mustela_putorius_furo
ENSDORG00000016190	Frg1	100	83.333	ENSMLUG00000023179	FRG1	100	82.558	Myotis_lucifugus
ENSDORG00000016190	Frg1	100	84.884	ENSNGAG00000016411	Frg1	100	84.884	Nannospalax_galili
ENSDORG00000016190	Frg1	75	67.222	ENSNBRG00000006806	frg1	81	64.481	Neolamprologus_brichardi
ENSDORG00000016190	Frg1	100	82.946	ENSNLEG00000000930	FRG1	100	81.783	Nomascus_leucogenys
ENSDORG00000016190	Frg1	100	71.825	ENSNLEG00000032333	-	100	71.032	Nomascus_leucogenys
ENSDORG00000016190	Frg1	77	71.782	ENSNLEG00000028874	-	91	71.782	Nomascus_leucogenys
ENSDORG00000016190	Frg1	77	73.762	ENSNLEG00000036059	-	86	73.762	Nomascus_leucogenys
ENSDORG00000016190	Frg1	100	69.084	ENSNLEG00000035849	-	100	71.374	Nomascus_leucogenys
ENSDORG00000016190	Frg1	100	55.814	ENSNLEG00000032846	-	100	64.286	Nomascus_leucogenys
ENSDORG00000016190	Frg1	56	73.684	ENSMEUG00000007509	-	59	73.684	Notamacropus_eugenii
ENSDORG00000016190	Frg1	75	92.778	ENSOPRG00000004722	-	70	92.778	Ochotona_princeps
ENSDORG00000016190	Frg1	100	84.496	ENSODEG00000006458	-	100	82.171	Octodon_degus
ENSDORG00000016190	Frg1	100	64.427	ENSODEG00000006953	-	100	63.241	Octodon_degus
ENSDORG00000016190	Frg1	100	62.162	ENSONIG00000010162	frg1	100	61.776	Oreochromis_niloticus
ENSDORG00000016190	Frg1	64	74.854	ENSOANG00000005659	-	76	74.854	Ornithorhynchus_anatinus
ENSDORG00000016190	Frg1	100	84.496	ENSOCUG00000009038	-	100	84.496	Oryctolagus_cuniculus
ENSDORG00000016190	Frg1	95	61.538	ENSORLG00000008106	frg1	89	61.134	Oryzias_latipes
ENSDORG00000016190	Frg1	100	62.403	ENSORLG00020014355	frg1	100	62.403	Oryzias_latipes_hni
ENSDORG00000016190	Frg1	100	62.403	ENSORLG00015014159	frg1	100	62.403	Oryzias_latipes_hsok
ENSDORG00000016190	Frg1	75	71.111	ENSOMEG00000002468	frg1	76	69.149	Oryzias_melastigma
ENSDORG00000016190	Frg1	100	84.109	ENSOGAG00000005749	-	100	84.109	Otolemur_garnettii
ENSDORG00000016190	Frg1	100	83.908	ENSOARG00000008592	FRG1	100	83.908	Ovis_aries
ENSDORG00000016190	Frg1	95	64.435	ENSPPAG00000043174	-	100	64.435	Pan_paniscus
ENSDORG00000016190	Frg1	75	94.444	ENSPPAG00000043170	-	83	94.444	Pan_paniscus
ENSDORG00000016190	Frg1	100	82.171	ENSPPRG00000019777	-	100	81.395	Panthera_pardus
ENSDORG00000016190	Frg1	100	86.047	ENSPPRG00000025003	-	100	86.047	Panthera_pardus
ENSDORG00000016190	Frg1	100	82.558	ENSPTIG00000006566	-	100	81.783	Panthera_tigris_altaica
ENSDORG00000016190	Frg1	100	85.271	ENSPTIG00000006588	-	100	85.271	Panthera_tigris_altaica
ENSDORG00000016190	Frg1	95	63.563	ENSPTRG00000052363	-	99	63.968	Pan_troglodytes
ENSDORG00000016190	Frg1	100	84.884	ENSPTRG00000016671	-	100	84.884	Pan_troglodytes
ENSDORG00000016190	Frg1	100	84.884	ENSPTRG00000050205	-	100	84.884	Pan_troglodytes
ENSDORG00000016190	Frg1	95	61.044	ENSPTRG00000050204	-	100	61.044	Pan_troglodytes
ENSDORG00000016190	Frg1	88	69.955	ENSPTRG00000043123	-	94	70.222	Pan_troglodytes
ENSDORG00000016190	Frg1	95	65.975	ENSPTRG00000044710	-	100	65.975	Pan_troglodytes
ENSDORG00000016190	Frg1	80	83.505	ENSPANG00000031530	-	91	83.505	Papio_anubis
ENSDORG00000016190	Frg1	100	60.465	ENSPKIG00000024189	frg1	100	63.178	Paramormyrops_kingsleyae
ENSDORG00000016190	Frg1	82	75.000	ENSPSIG00000017971	-	82	75.000	Pelodiscus_sinensis
ENSDORG00000016190	Frg1	97	58.730	ENSPMGG00000019273	frg1	100	58.333	Periophthalmus_magnuspinnatus
ENSDORG00000016190	Frg1	100	85.271	ENSPEMG00000000650	Frg1	100	85.271	Peromyscus_maniculatus_bairdii
ENSDORG00000016190	Frg1	100	77.519	ENSPCIG00000007530	-	69	77.519	Phascolarctos_cinereus
ENSDORG00000016190	Frg1	100	63.320	ENSPFOG00000006721	frg1	100	63.320	Poecilia_formosa
ENSDORG00000016190	Frg1	100	60.853	ENSPMEG00000013816	frg1	100	60.465	Poecilia_mexicana
ENSDORG00000016190	Frg1	100	60.465	ENSPREG00000000097	frg1	100	60.078	Poecilia_reticulata
ENSDORG00000016190	Frg1	58	74.051	ENSPPYG00000011275	-	87	74.051	Pongo_abelii
ENSDORG00000016190	Frg1	95	80.081	ENSPCAG00000014953	-	100	80.081	Procavia_capensis
ENSDORG00000016190	Frg1	60	95.833	ENSPCOG00000022726	FRG1	81	95.833	Propithecus_coquereli
ENSDORG00000016190	Frg1	100	70.543	ENSPVAG00000010551	FRG1	100	70.543	Pteropus_vampyrus
ENSDORG00000016190	Frg1	64	60.819	ENSPNYG00000015209	frg1	74	60.819	Pundamilia_nyererei
ENSDORG00000016190	Frg1	100	62.791	ENSPNAG00000013259	frg1	100	62.791	Pygocentrus_nattereri
ENSDORG00000016190	Frg1	100	84.109	ENSRNOG00000009846	Frg1	100	84.109	Rattus_norvegicus
ENSDORG00000016190	Frg1	86	82.222	ENSRBIG00000042219	-	94	82.222	Rhinopithecus_bieti
ENSDORG00000016190	Frg1	100	85.200	ENSRROG00000015523	FRG1	100	85.200	Rhinopithecus_roxellana
ENSDORG00000016190	Frg1	81	77.465	ENSRROG00000032084	-	88	77.465	Rhinopithecus_roxellana
ENSDORG00000016190	Frg1	100	82.946	ENSSBOG00000034175	FRG1	100	82.171	Saimiri_boliviensis_boliviensis
ENSDORG00000016190	Frg1	100	79.457	ENSSHAG00000005886	-	100	79.457	Sarcophilus_harrisii
ENSDORG00000016190	Frg1	97	61.600	ENSSFOG00015021361	frg1	99	62.800	Scleropages_formosus
ENSDORG00000016190	Frg1	100	61.628	ENSSMAG00000001213	frg1	100	60.465	Scophthalmus_maximus
ENSDORG00000016190	Frg1	100	62.016	ENSSDUG00000018886	frg1	100	61.240	Seriola_dumerili
ENSDORG00000016190	Frg1	100	61.240	ENSSLDG00000024191	frg1	100	61.240	Seriola_lalandi_dorsalis
ENSDORG00000016190	Frg1	59	94.366	ENSSARG00000002471	-	75	94.366	Sorex_araneus
ENSDORG00000016190	Frg1	100	67.829	ENSSPUG00000017326	-	100	67.829	Sphenodon_punctatus
ENSDORG00000016190	Frg1	100	59.302	ENSSPAG00000013294	frg1	100	59.302	Stegastes_partitus
ENSDORG00000016190	Frg1	100	85.271	ENSSSCG00000006996	FRG1	100	85.271	Sus_scrofa
ENSDORG00000016190	Frg1	100	75.194	ENSTGUG00000007028	-	100	72.481	Taeniopygia_guttata
ENSDORG00000016190	Frg1	100	62.016	ENSTRUG00000016208	frg1	100	62.016	Takifugu_rubripes
ENSDORG00000016190	Frg1	100	61.240	ENSTNIG00000007128	frg1	100	61.240	Tetraodon_nigroviridis
ENSDORG00000016190	Frg1	75	56.216	ENSTBEG00000017605	-	99	56.216	Tupaia_belangeri
ENSDORG00000016190	Frg1	81	55.814	ENSTBEG00000012789	-	100	55.814	Tupaia_belangeri
ENSDORG00000016190	Frg1	100	83.333	ENSTBEG00000014491	-	100	83.333	Tupaia_belangeri
ENSDORG00000016190	Frg1	100	86.047	ENSTTRG00000003429	FRG1	100	86.047	Tursiops_truncatus
ENSDORG00000016190	Frg1	95	76.518	ENSUAMG00000012123	-	100	76.518	Ursus_americanus
ENSDORG00000016190	Frg1	100	86.047	ENSUMAG00000021119	FRG1	100	86.047	Ursus_maritimus
ENSDORG00000016190	Frg1	100	85.375	ENSVPAG00000000616	FRG1	100	84.980	Vicugna_pacos
ENSDORG00000016190	Frg1	86	84.889	ENSVPAG00000011977	-	93	85.000	Vicugna_pacos
ENSDORG00000016190	Frg1	81	84.977	ENSVVUG00000007181	-	77	84.977	Vulpes_vulpes
ENSDORG00000016190	Frg1	100	70.930	ENSXETG00000012470	frg1	100	68.992	Xenopus_tropicalis
ENSDORG00000016190	Frg1	100	57.752	ENSXCOG00000005312	frg1	100	57.752	Xiphophorus_couchianus
ENSDORG00000016190	Frg1	100	60.078	ENSXMAG00000007751	frg1	100	59.690	Xiphophorus_maculatus