EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDORG00000016199 (Gene tree)
Gene ID: 105990293
Gene Symbol: Safb2
Alias: -
Full Name: scaffold attachment factor B2
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Minus strand
Length: 26664 bases
Position: chrKN672410.1:2571640-2598303
Accession: 105990293
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000015239	RRM_5	PF13893.6	1.6e-06	1	1
ENSDORP00000015239	RRM_1	PF00076.22	7.9e-14	1	1
ENSDORP00000015239	SAP	PF02037.27	5.8e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000016199	-	2658	XM_013022657	ENSDORP00000015239	885 (aa)	XP_012878111	UPI000BAD21D5
ENSDORT00000030242	-	750	-	ENSDORP00000019769	250 (aa)	-	UPI000BAD25C9

Gene Model

Click here to download ENSDORG00000016199's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000016199's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDORG00000016199	Safb2	66	63.240	ENSDORG00000016200	Safb	96	55.626

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000016199	Safb2	100	76.056	ENSG00000130254	SAFB2	95	75.840	Homo_sapiens
ENSDORG00000016199	Safb2	100	74.593	ENSAMEG00000012146	SAFB2	95	74.484	Ailuropoda_melanoleuca
ENSDORG00000016199	Safb2	100	76.586	ENSANAG00000031936	SAFB2	95	76.368	Aotus_nancymaae
ENSDORG00000016199	Safb2	100	73.102	ENSBTAG00000001790	SAFB2	95	73.210	Bos_taurus
ENSDORG00000016199	Safb2	100	76.247	ENSCAFG00000018814	SAFB2	95	76.139	Canis_familiaris
ENSDORG00000016199	Safb2	100	75.974	ENSCAFG00020018939	SAFB2	95	76.082	Canis_lupus_dingo
ENSDORG00000016199	Safb2	100	73.152	ENSCHIG00000024547	SAFB2	96	73.102	Capra_hircus
ENSDORG00000016199	Safb2	62	67.887	ENSCAPG00000011771	SAFB2	90	63.810	Cavia_aperea
ENSDORG00000016199	Safb2	100	71.975	ENSCPOG00000011394	SAFB2	95	71.975	Cavia_porcellus
ENSDORG00000016199	Safb2	100	76.696	ENSCCAG00000017348	SAFB2	95	76.477	Cebus_capucinus
ENSDORG00000016199	Safb2	100	76.123	ENSCATG00000039497	SAFB2	95	75.904	Cercocebus_atys
ENSDORG00000016199	Safb2	100	76.598	ENSCSAG00000009959	SAFB2	95	76.381	Chlorocebus_sabaeus
ENSDORG00000016199	Safb2	76	67.376	ENSCHOG00000010684	SAFB2	99	67.756	Choloepus_hoffmanni
ENSDORG00000016199	Safb2	100	74.179	ENSCANG00000024675	SAFB2	95	73.501	Colobus_angolensis_palliatus
ENSDORG00000016199	Safb2	100	64.938	ENSCGRG00001015833	Safb2	95	64.828	Cricetulus_griseus_chok1gshd
ENSDORG00000016199	Safb2	100	64.938	ENSCGRG00000011131	Safb2	95	64.828	Cricetulus_griseus_crigri
ENSDORG00000016199	Safb2	88	74.875	ENSEASG00005022952	SAFB2	85	77.415	Equus_asinus_asinus
ENSDORG00000016199	Safb2	100	73.941	ENSECAG00000018978	SAFB2	100	73.507	Equus_caballus
ENSDORG00000016199	Safb2	100	75.731	ENSFCAG00000011834	SAFB2	95	75.840	Felis_catus
ENSDORG00000016199	Safb2	89	75.399	ENSFDAG00000020009	SAFB2	95	75.041	Fukomys_damarensis
ENSDORG00000016199	Safb2	100	73.628	ENSGGOG00000015093	SAFB2	95	70.614	Gorilla_gorilla
ENSDORG00000016199	Safb2	100	75.902	ENSHGLG00000017442	SAFB2	95	75.902	Heterocephalus_glaber_female
ENSDORG00000016199	Safb2	99	70.874	ENSLAFG00000003836	SAFB2	96	70.204	Loxodonta_africana
ENSDORG00000016199	Safb2	100	76.915	ENSMFAG00000039706	SAFB2	95	76.696	Macaca_fascicularis
ENSDORG00000016199	Safb2	100	78.261	ENSMMUG00000017968	SAFB2	100	78.484	Macaca_mulatta
ENSDORG00000016199	Safb2	100	71.413	ENSMNEG00000032042	SAFB2	95	70.999	Macaca_nemestrina
ENSDORG00000016199	Safb2	100	77.133	ENSMLEG00000034562	SAFB2	95	76.915	Mandrillus_leucophaeus
ENSDORG00000016199	Safb2	79	74.514	ENSMAUG00000011573	Safb2	85	75.649	Mesocricetus_auratus
ENSDORG00000016199	Safb2	100	74.403	ENSMICG00000008711	SAFB2	94	74.295	Microcebus_murinus
ENSDORG00000016199	Safb2	99	66.702	ENSMOCG00000006827	Safb2	94	67.547	Microtus_ochrogaster
ENSDORG00000016199	Safb2	97	63.239	ENSMODG00000001178	SAFB2	95	63.588	Monodelphis_domestica
ENSDORG00000016199	Safb2	100	64.095	MGP_CAROLIEiJ_G0021779	Safb2	95	63.889	Mus_caroli
ENSDORG00000016199	Safb2	100	64.403	ENSMUSG00000042625	Safb2	95	64.161	Mus_musculus
ENSDORG00000016199	Safb2	100	64.182	MGP_PahariEiJ_G0020768	Safb2	95	63.975	Mus_pahari
ENSDORG00000016199	Safb2	100	59.243	MGP_SPRETEiJ_G0022690	Safb2	95	58.684	Mus_spretus
ENSDORG00000016199	Safb2	100	75.758	ENSMPUG00000006106	SAFB2	88	75.649	Mustela_putorius_furo
ENSDORG00000016199	Safb2	100	72.210	ENSMLUG00000001050	SAFB2	95	69.626	Myotis_lucifugus
ENSDORG00000016199	Safb2	100	75.787	ENSNLEG00000013514	SAFB2	95	75.570	Nomascus_leucogenys
ENSDORG00000016199	Safb2	90	61.408	ENSMEUG00000002456	SAFB2	91	61.725	Notamacropus_eugenii
ENSDORG00000016199	Safb2	100	66.595	ENSOPRG00000011523	-	94	66.703	Ochotona_princeps
ENSDORG00000016199	Safb2	96	78.093	ENSODEG00000014751	SAFB2	92	77.866	Octodon_degus
ENSDORG00000016199	Safb2	99	74.289	ENSOGAG00000006855	SAFB2	95	74.134	Otolemur_garnettii
ENSDORG00000016199	Safb2	100	64.719	ENSOARG00000007982	SAFB2	67	70.806	Ovis_aries
ENSDORG00000016199	Safb2	100	76.273	ENSPPAG00000043392	SAFB2	95	76.056	Pan_paniscus
ENSDORG00000016199	Safb2	100	76.056	ENSPPRG00000011310	SAFB2	95	75.948	Panthera_pardus
ENSDORG00000016199	Safb2	77	76.628	ENSPTIG00000015120	SAFB2	80	76.967	Panthera_tigris_altaica
ENSDORG00000016199	Safb2	100	71.694	ENSPTRG00000010334	SAFB2	94	71.366	Pan_troglodytes
ENSDORG00000016199	Safb2	100	77.024	ENSPANG00000007004	SAFB2	95	76.805	Papio_anubis
ENSDORG00000016199	Safb2	100	64.419	ENSPEMG00000016015	Safb2	97	62.409	Peromyscus_maniculatus_bairdii
ENSDORG00000016199	Safb2	65	71.453	ENSPCIG00000009518	-	99	71.964	Phascolarctos_cinereus
ENSDORG00000016199	Safb2	100	76.490	ENSPPYG00000009427	SAFB2	95	76.273	Pongo_abelii
ENSDORG00000016199	Safb2	99	70.044	ENSPCAG00000006352	SAFB2	95	70.334	Procavia_capensis
ENSDORG00000016199	Safb2	100	72.451	ENSPCOG00000023260	SAFB2	95	71.429	Propithecus_coquereli
ENSDORG00000016199	Safb2	50	82.609	ENSPVAG00000004902	-	61	82.609	Pteropus_vampyrus
ENSDORG00000016199	Safb2	84	65.564	ENSRNOG00000049511	AABR07066522.1	99	63.725	Rattus_norvegicus
ENSDORG00000016199	Safb2	80	84.201	ENSRBIG00000033446	SAFB2	90	84.201	Rhinopithecus_bieti
ENSDORG00000016199	Safb2	100	77.462	ENSRROG00000006606	SAFB2	95	77.243	Rhinopithecus_roxellana
ENSDORG00000016199	Safb2	100	76.535	ENSSBOG00000032315	SAFB2	100	75.787	Saimiri_boliviensis_boliviensis
ENSDORG00000016199	Safb2	97	63.046	ENSSHAG00000012703	SAFB2	93	63.423	Sarcophilus_harrisii
ENSDORG00000016199	Safb2	80	66.714	ENSSARG00000000649	SAFB2	89	68.480	Sorex_araneus
ENSDORG00000016199	Safb2	100	76.623	ENSSSCG00000013523	SAFB2	97	78.256	Sus_scrofa
ENSDORG00000016199	Safb2	76	67.754	ENSTBEG00000012709	SAFB2	79	67.754	Tupaia_belangeri
ENSDORG00000016199	Safb2	89	70.012	ENSTTRG00000013585	SAFB2	84	70.024	Tursiops_truncatus
ENSDORG00000016199	Safb2	100	77.448	ENSUAMG00000024695	SAFB2	94	77.338	Ursus_americanus
ENSDORG00000016199	Safb2	86	75.132	ENSUMAG00000009585	SAFB2	84	72.899	Ursus_maritimus
ENSDORG00000016199	Safb2	75	88.542	ENSVPAG00000012041	SAFB2	88	88.587	Vicugna_pacos
ENSDORG00000016199	Safb2	100	76.082	ENSVVUG00000013695	SAFB2	95	76.190	Vulpes_vulpes