EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSDORG00000016222 (Gene tree)
Gene ID: 105989348
Gene Symbol: Trub2
Alias: -
Full Name: TruB pseudouridine synthase family member 2
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Minus strand
Length: 11915 bases
Position: chrKN672401.1:4598283-4610197
Accession: 105989348
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000015262	TruB_N	PF01509.18	1.3e-25	1	1
ENSDORP00000027620	TruB_N	PF01509.18	1.4e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000016222	-	954	-	ENSDORP00000015262	317 (aa)	-	UPI000BAD0982
ENSDORT00000030075	-	1326	XM_013021333	ENSDORP00000027620	332 (aa)	XP_012876787	A0A1S3FLN4

Gene Model

Click here to download ENSDORG00000016222's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000016222's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000016222	Trub2	98	83.226	ENSG00000167112	TRUB2	100	80.539	Homo_sapiens
ENSDORG00000016222	Trub2	65	59.024	ENSAPOG00000015733	trub2	74	59.024	Acanthochromis_polyacanthus
ENSDORG00000016222	Trub2	87	44.245	ENSAPOG00000018284	-	76	61.069	Acanthochromis_polyacanthus
ENSDORG00000016222	Trub2	98	84.665	ENSAMEG00000015395	TRUB2	99	81.873	Ailuropoda_melanoleuca
ENSDORG00000016222	Trub2	87	53.957	ENSACIG00000016500	trub2	84	53.957	Amphilophus_citrinellus
ENSDORG00000016222	Trub2	87	57.554	ENSAOCG00000002330	trub2	82	57.554	Amphiprion_ocellaris
ENSDORG00000016222	Trub2	87	57.914	ENSAPEG00000013177	trub2	82	57.914	Amphiprion_percula
ENSDORG00000016222	Trub2	88	56.071	ENSATEG00000011371	trub2	88	56.071	Anabas_testudineus
ENSDORG00000016222	Trub2	91	59.655	ENSAPLG00000009254	TRUB2	94	59.862	Anas_platyrhynchos
ENSDORG00000016222	Trub2	93	63.946	ENSACAG00000007331	TRUB2	93	61.736	Anolis_carolinensis
ENSDORG00000016222	Trub2	98	83.548	ENSANAG00000036234	TRUB2	99	83.548	Aotus_nancymaae
ENSDORG00000016222	Trub2	93	51.178	ENSACLG00000010793	trub2	88	51.178	Astatotilapia_calliptera
ENSDORG00000016222	Trub2	98	51.682	ENSAMXG00000031679	trub2	93	51.682	Astyanax_mexicanus
ENSDORG00000016222	Trub2	50	83.439	ENSBTAG00000055269	-	81	78.771	Bos_taurus
ENSDORG00000016222	Trub2	52	80.488	ENSBTAG00000004663	TRUB2	100	80.488	Bos_taurus
ENSDORG00000016222	Trub2	98	82.258	ENSCJAG00000020009	TRUB2	99	80.303	Callithrix_jacchus
ENSDORG00000016222	Trub2	98	84.516	ENSCAFG00000020068	TRUB2	100	81.737	Canis_familiaris
ENSDORG00000016222	Trub2	56	85.393	ENSCAFG00020017325	-	100	85.393	Canis_lupus_dingo
ENSDORG00000016222	Trub2	100	80.120	ENSCHIG00000021160	TRUB2	100	80.120	Capra_hircus
ENSDORG00000016222	Trub2	98	84.194	ENSTSYG00000034163	TRUB2	100	81.325	Carlito_syrichta
ENSDORG00000016222	Trub2	86	82.418	ENSCAPG00000000223	TRUB2	98	79.110	Cavia_aperea
ENSDORG00000016222	Trub2	98	83.548	ENSCPOG00000013535	TRUB2	98	80.243	Cavia_porcellus
ENSDORG00000016222	Trub2	98	82.581	ENSCCAG00000026531	-	98	81.056	Cebus_capucinus
ENSDORG00000016222	Trub2	96	79.605	ENSCCAG00000028463	-	98	76.147	Cebus_capucinus
ENSDORG00000016222	Trub2	100	80.422	ENSCATG00000038234	TRUB2	100	80.422	Cercocebus_atys
ENSDORG00000016222	Trub2	98	84.194	ENSCLAG00000001702	TRUB2	99	82.407	Chinchilla_lanigera
ENSDORG00000016222	Trub2	98	77.814	ENSCSAG00000014117	TRUB2	100	75.075	Chlorocebus_sabaeus
ENSDORG00000016222	Trub2	98	82.903	ENSCHOG00000001555	TRUB2	100	80.422	Choloepus_hoffmanni
ENSDORG00000016222	Trub2	94	64.983	ENSCPBG00000025186	TRUB2	87	64.983	Chrysemys_picta_bellii
ENSDORG00000016222	Trub2	91	33.106	ENSCSAVG00000003930	-	90	33.106	Ciona_savignyi
ENSDORG00000016222	Trub2	98	75.161	ENSCANG00000016135	TRUB2	100	72.754	Colobus_angolensis_palliatus
ENSDORG00000016222	Trub2	99	81.571	ENSCGRG00001024441	Trub2	99	81.571	Cricetulus_griseus_chok1gshd
ENSDORG00000016222	Trub2	99	81.571	ENSCGRG00000005633	Trub2	99	81.571	Cricetulus_griseus_crigri
ENSDORG00000016222	Trub2	87	55.036	ENSCSEG00000001331	trub2	83	55.036	Cynoglossus_semilaevis
ENSDORG00000016222	Trub2	97	52.258	ENSCVAG00000009901	trub2	92	52.258	Cyprinodon_variegatus
ENSDORG00000016222	Trub2	87	54.152	ENSDARG00000028379	trub2	79	54.152	Danio_rerio
ENSDORG00000016222	Trub2	97	56.731	ENSDNOG00000043967	-	98	53.614	Dasypus_novemcinctus
ENSDORG00000016222	Trub2	98	81.935	ENSDNOG00000045679	-	100	78.916	Dasypus_novemcinctus
ENSDORG00000016222	Trub2	88	33.444	FBgn0033060	CG7849	94	33.444	Drosophila_melanogaster
ENSDORG00000016222	Trub2	94	82.215	ENSETEG00000009114	TRUB2	98	78.193	Echinops_telfairi
ENSDORG00000016222	Trub2	79	42.697	ENSEBUG00000015723	trub2	82	47.761	Eptatretus_burgeri
ENSDORG00000016222	Trub2	100	82.530	ENSEASG00005016819	TRUB2	100	82.530	Equus_asinus_asinus
ENSDORG00000016222	Trub2	100	82.530	ENSECAG00000023520	TRUB2	100	82.530	Equus_caballus
ENSDORG00000016222	Trub2	97	84.039	ENSEEUG00000008908	TRUB2	99	80.793	Erinaceus_europaeus
ENSDORG00000016222	Trub2	90	53.156	ENSELUG00000002376	trub2	94	53.156	Esox_lucius
ENSDORG00000016222	Trub2	97	82.958	ENSFCAG00000005839	TRUB2	97	82.958	Felis_catus
ENSDORG00000016222	Trub2	83	63.636	ENSFALG00000001364	TRUB2	85	64.015	Ficedula_albicollis
ENSDORG00000016222	Trub2	98	83.226	ENSFDAG00000021374	TRUB2	99	80.665	Fukomys_damarensis
ENSDORG00000016222	Trub2	90	49.653	ENSFHEG00000014655	trub2	85	49.653	Fundulus_heteroclitus
ENSDORG00000016222	Trub2	85	47.970	ENSGMOG00000000981	trub2	92	47.464	Gadus_morhua
ENSDORG00000016222	Trub2	91	62.500	ENSGALG00000004920	TRUB2	71	62.500	Gallus_gallus
ENSDORG00000016222	Trub2	87	56.115	ENSGAFG00000010107	trub2	87	53.767	Gambusia_affinis
ENSDORG00000016222	Trub2	97	54.221	ENSGACG00000001476	trub2	90	54.221	Gasterosteus_aculeatus
ENSDORG00000016222	Trub2	93	66.102	ENSGAGG00000022872	TRUB2	88	66.102	Gopherus_agassizii
ENSDORG00000016222	Trub2	98	83.226	ENSGGOG00000014780	TRUB2	99	80.781	Gorilla_gorilla
ENSDORG00000016222	Trub2	92	52.381	ENSHBUG00000022384	trub2	88	52.381	Haplochromis_burtoni
ENSDORG00000016222	Trub2	98	83.548	ENSHGLG00000016715	TRUB2	100	81.325	Heterocephalus_glaber_female
ENSDORG00000016222	Trub2	98	83.548	ENSHGLG00100016548	TRUB2	100	81.325	Heterocephalus_glaber_male
ENSDORG00000016222	Trub2	92	54.575	ENSHCOG00000017748	trub2	94	54.575	Hippocampus_comes
ENSDORG00000016222	Trub2	92	53.242	ENSIPUG00000017725	hdhd3	51	53.242	Ictalurus_punctatus
ENSDORG00000016222	Trub2	98	84.295	ENSSTOG00000008024	-	100	81.024	Ictidomys_tridecemlineatus
ENSDORG00000016222	Trub2	97	85.993	ENSSTOG00000022617	-	99	82.263	Ictidomys_tridecemlineatus
ENSDORG00000016222	Trub2	100	73.193	ENSJJAG00000019181	Trub2	100	73.193	Jaculus_jaculus
ENSDORG00000016222	Trub2	88	54.286	ENSKMAG00000007861	trub2	84	54.286	Kryptolebias_marmoratus
ENSDORG00000016222	Trub2	98	50.962	ENSLBEG00000000907	trub2	91	50.962	Labrus_bergylta
ENSDORG00000016222	Trub2	92	64.261	ENSLACG00000001515	TRUB2	86	64.261	Latimeria_chalumnae
ENSDORG00000016222	Trub2	91	58.966	ENSLOCG00000000885	trub2	95	58.966	Lepisosteus_oculatus
ENSDORG00000016222	Trub2	95	87.000	ENSLAFG00000002174	TRUB2	99	87.000	Loxodonta_africana
ENSDORG00000016222	Trub2	97	83.495	ENSMFAG00000000881	TRUB2	100	80.422	Macaca_fascicularis
ENSDORG00000016222	Trub2	97	83.495	ENSMMUG00000014146	TRUB2	100	80.120	Macaca_mulatta
ENSDORG00000016222	Trub2	97	83.172	ENSMNEG00000011189	TRUB2	100	80.120	Macaca_nemestrina
ENSDORG00000016222	Trub2	97	83.172	ENSMLEG00000037270	TRUB2	100	80.120	Mandrillus_leucophaeus
ENSDORG00000016222	Trub2	87	55.556	ENSMAMG00000023643	trub2	92	55.556	Mastacembelus_armatus
ENSDORG00000016222	Trub2	93	51.515	ENSMZEG00005016018	trub2	88	51.515	Maylandia_zebra
ENSDORG00000016222	Trub2	63	67.839	ENSMGAG00000003894	TRUB2	99	67.839	Meleagris_gallopavo
ENSDORG00000016222	Trub2	97	84.466	ENSMAUG00000010403	Trub2	100	81.325	Mesocricetus_auratus
ENSDORG00000016222	Trub2	98	82.958	ENSMICG00000047032	TRUB2	100	80.422	Microcebus_murinus
ENSDORG00000016222	Trub2	94	85.284	ENSMOCG00000014291	Trub2	99	85.284	Microtus_ochrogaster
ENSDORG00000016222	Trub2	95	54.276	ENSMMOG00000021674	trub2	93	54.276	Mola_mola
ENSDORG00000016222	Trub2	91	72.759	ENSMODG00000005940	TRUB2	98	72.759	Monodelphis_domestica
ENSDORG00000016222	Trub2	87	57.801	ENSMALG00000021231	trub2	83	57.801	Monopterus_albus
ENSDORG00000016222	Trub2	98	82.428	MGP_CAROLIEiJ_G0023368	Trub2	100	80.422	Mus_caroli
ENSDORG00000016222	Trub2	98	82.428	ENSMUSG00000039826	Trub2	99	80.665	Mus_musculus
ENSDORG00000016222	Trub2	98	83.067	MGP_PahariEiJ_G0024826	Trub2	100	80.723	Mus_pahari
ENSDORG00000016222	Trub2	98	83.067	MGP_SPRETEiJ_G0024286	Trub2	99	81.269	Mus_spretus
ENSDORG00000016222	Trub2	98	81.789	ENSMPUG00000013206	TRUB2	91	79.518	Mustela_putorius_furo
ENSDORG00000016222	Trub2	98	83.548	ENSMLUG00000005256	TRUB2	98	79.697	Myotis_lucifugus
ENSDORG00000016222	Trub2	100	82.530	ENSNGAG00000018679	Trub2	100	82.530	Nannospalax_galili
ENSDORG00000016222	Trub2	87	53.597	ENSNBRG00000016294	trub2	84	53.597	Neolamprologus_brichardi
ENSDORG00000016222	Trub2	98	81.935	ENSNLEG00000017556	TRUB2	100	79.042	Nomascus_leucogenys
ENSDORG00000016222	Trub2	93	73.649	ENSMEUG00000000484	TRUB2	95	73.649	Notamacropus_eugenii
ENSDORG00000016222	Trub2	97	81.230	ENSOPRG00000001981	TRUB2	95	80.952	Ochotona_princeps
ENSDORG00000016222	Trub2	100	82.500	ENSODEG00000017292	TRUB2	98	82.500	Octodon_degus
ENSDORG00000016222	Trub2	87	53.237	ENSONIG00000004230	trub2	84	53.237	Oreochromis_niloticus
ENSDORG00000016222	Trub2	59	78.610	ENSOANG00000029023	-	83	78.610	Ornithorhynchus_anatinus
ENSDORG00000016222	Trub2	97	84.091	ENSOCUG00000026296	TRUB2	91	81.138	Oryctolagus_cuniculus
ENSDORG00000016222	Trub2	96	51.148	ENSORLG00000020011	trub2	93	50.804	Oryzias_latipes
ENSDORG00000016222	Trub2	96	51.148	ENSORLG00020011028	trub2	90	50.323	Oryzias_latipes_hni
ENSDORG00000016222	Trub2	96	51.316	ENSORLG00015007494	trub2	94	50.804	Oryzias_latipes_hsok
ENSDORG00000016222	Trub2	88	56.940	ENSOMEG00000006702	trub2	85	56.940	Oryzias_melastigma
ENSDORG00000016222	Trub2	98	81.935	ENSOARG00000010579	-	100	79.217	Ovis_aries
ENSDORG00000016222	Trub2	76	79.051	ENSOARG00000003785	-	100	79.051	Ovis_aries
ENSDORG00000016222	Trub2	98	83.871	ENSPPAG00000043146	TRUB2	100	81.138	Pan_paniscus
ENSDORG00000016222	Trub2	97	82.958	ENSPPRG00000006307	TRUB2	97	82.958	Panthera_pardus
ENSDORG00000016222	Trub2	97	83.280	ENSPTIG00000012366	TRUB2	97	83.280	Panthera_tigris_altaica
ENSDORG00000016222	Trub2	98	83.548	ENSPTRG00000052151	-	100	80.240	Pan_troglodytes
ENSDORG00000016222	Trub2	98	83.548	ENSPTRG00000021423	TRUB2	100	80.240	Pan_troglodytes
ENSDORG00000016222	Trub2	97	83.172	ENSPANG00000025856	TRUB2	100	80.120	Papio_anubis
ENSDORG00000016222	Trub2	87	55.797	ENSPKIG00000019769	trub2	90	55.797	Paramormyrops_kingsleyae
ENSDORG00000016222	Trub2	93	60.000	ENSPSIG00000015701	TRUB2	99	60.000	Pelodiscus_sinensis
ENSDORG00000016222	Trub2	95	49.689	ENSPMGG00000010206	trub2	99	49.689	Periophthalmus_magnuspinnatus
ENSDORG00000016222	Trub2	97	82.258	ENSPEMG00000017893	Trub2	99	80.120	Peromyscus_maniculatus_bairdii
ENSDORG00000016222	Trub2	93	73.311	ENSPCIG00000026731	TRUB2	95	73.311	Phascolarctos_cinereus
ENSDORG00000016222	Trub2	87	55.036	ENSPFOG00000018018	trub2	75	54.064	Poecilia_formosa
ENSDORG00000016222	Trub2	88	55.197	ENSPLAG00000010484	trub2	81	54.225	Poecilia_latipinna
ENSDORG00000016222	Trub2	95	52.145	ENSPMEG00000012913	trub2	87	52.787	Poecilia_mexicana
ENSDORG00000016222	Trub2	87	54.317	ENSPREG00000002549	trub2	84	53.357	Poecilia_reticulata
ENSDORG00000016222	Trub2	98	81.290	ENSPPYG00000019650	TRUB2	100	79.635	Pongo_abelii
ENSDORG00000016222	Trub2	98	83.974	ENSPCAG00000015068	TRUB2	100	80.781	Procavia_capensis
ENSDORG00000016222	Trub2	98	83.280	ENSPCOG00000017100	TRUB2	100	81.024	Propithecus_coquereli
ENSDORG00000016222	Trub2	90	84.266	ENSPVAG00000001224	TRUB2	99	82.000	Pteropus_vampyrus
ENSDORG00000016222	Trub2	92	52.041	ENSPNYG00000013666	trub2	88	52.041	Pundamilia_nyererei
ENSDORG00000016222	Trub2	98	50.000	ENSPNAG00000017292	trub2	92	50.000	Pygocentrus_nattereri
ENSDORG00000016222	Trub2	100	80.435	ENSRNOG00000043189	Trub2	99	80.435	Rattus_norvegicus
ENSDORG00000016222	Trub2	98	74.839	ENSRBIG00000006965	TRUB2	100	72.754	Rhinopithecus_bieti
ENSDORG00000016222	Trub2	98	83.871	ENSRROG00000042928	TRUB2	100	81.138	Rhinopithecus_roxellana
ENSDORG00000016222	Trub2	98	81.935	ENSSBOG00000022439	TRUB2	98	79.939	Saimiri_boliviensis_boliviensis
ENSDORG00000016222	Trub2	88	56.835	ENSSFOG00015013391	trub2	91	56.491	Scleropages_formosus
ENSDORG00000016222	Trub2	87	57.554	ENSSMAG00000020820	trub2	84	57.554	Scophthalmus_maximus
ENSDORG00000016222	Trub2	87	55.755	ENSSDUG00000016928	trub2	83	55.755	Seriola_dumerili
ENSDORG00000016222	Trub2	87	55.396	ENSSLDG00000024701	trub2	83	55.396	Seriola_lalandi_dorsalis
ENSDORG00000016222	Trub2	94	61.333	ENSSPUG00000015515	TRUB2	90	61.333	Sphenodon_punctatus
ENSDORG00000016222	Trub2	87	58.633	ENSSPAG00000017865	trub2	84	59.140	Stegastes_partitus
ENSDORG00000016222	Trub2	98	84.194	ENSSSCG00000005645	TRUB2	99	79.530	Sus_scrofa
ENSDORG00000016222	Trub2	82	65.134	ENSTGUG00000003704	TRUB2	99	65.134	Taeniopygia_guttata
ENSDORG00000016222	Trub2	88	52.143	ENSTRUG00000015499	trub2	86	52.143	Takifugu_rubripes
ENSDORG00000016222	Trub2	88	54.255	ENSTNIG00000014721	trub2	96	54.255	Tetraodon_nigroviridis
ENSDORG00000016222	Trub2	68	76.991	ENSTBEG00000000586	TRUB2	100	76.991	Tupaia_belangeri
ENSDORG00000016222	Trub2	100	76.048	ENSTTRG00000016486	TRUB2	100	76.048	Tursiops_truncatus
ENSDORG00000016222	Trub2	98	84.665	ENSUAMG00000020276	TRUB2	96	81.571	Ursus_americanus
ENSDORG00000016222	Trub2	98	84.665	ENSUMAG00000022051	TRUB2	96	81.571	Ursus_maritimus
ENSDORG00000016222	Trub2	98	64.537	ENSVPAG00000005793	TRUB2	99	64.537	Vicugna_pacos
ENSDORG00000016222	Trub2	98	83.871	ENSVVUG00000013451	TRUB2	89	83.871	Vulpes_vulpes
ENSDORG00000016222	Trub2	87	65.217	ENSXETG00000003973	trub2	85	65.217	Xenopus_tropicalis
ENSDORG00000016222	Trub2	87	55.036	ENSXCOG00000008759	trub2	83	55.036	Xiphophorus_couchianus
ENSDORG00000016222	Trub2	87	55.036	ENSXMAG00000015478	trub2	83	55.036	Xiphophorus_maculatus