EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDORG00000016304 (Gene tree)
Gene ID: 105980104
Gene Symbol: Arl5c
Alias: -
Full Name: ADP ribosylation factor like GTPase 5C
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Minus strand
Length: 6979 bases
Position: chrKN672353.1:20443844-20450822
Accession: 105980104
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000017724	MMR_HSR1	PF01926.23	3.8e-06	1	1
ENSDORP00000015340	MMR_HSR1	PF01926.23	4.4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000035202	-	682	XM_013008818	ENSDORP00000017724	179 (aa)	XP_012864272	A0A1S3EJZ3
ENSDORT00000016303	-	570	-	ENSDORP00000015340	189 (aa)	-	UPI000BACF51F

Gene Model

Click here to download ENSDORG00000016304's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000016304's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDORG00000016304	Arl5c	96	74.269	ENSDORG00000027820	Arl5b	100	74.269
ENSDORG00000016304	Arl5c	93	43.976	ENSDORG00000012086	Arl3	91	43.976
ENSDORG00000016304	Arl5c	100	43.889	ENSDORG00000024681	Arf3	99	43.889
ENSDORG00000016304	Arl5c	98	46.023	ENSDORG00000027855	-	97	46.023
ENSDORG00000016304	Arl5c	92	38.788	ENSDORG00000004251	Arl2	90	38.788
ENSDORG00000016304	Arl5c	91	36.782	ENSDORG00000013488	Arfrp1	86	36.782
ENSDORG00000016304	Arl5c	87	41.358	ENSDORG00000028437	Arl4a	81	41.358
ENSDORG00000016304	Arl5c	98	44.886	ENSDORG00000025138	Arf2	97	44.886
ENSDORG00000016304	Arl5c	100	41.111	ENSDORG00000000325	Arf5	100	41.111
ENSDORG00000016304	Arl5c	82	43.871	ENSDORG00000028955	Arl4c	81	43.038
ENSDORG00000016304	Arl5c	84	30.675	ENSDORG00000023904	Arl8b	85	30.675
ENSDORG00000016304	Arl5c	86	34.375	ENSDORG00000023792	Arl4d	80	34.375
ENSDORG00000016304	Arl5c	93	39.766	ENSDORG00000023352	Arl11	92	39.766
ENSDORG00000016304	Arl5c	99	39.674	ENSDORG00000009252	Arl6	98	39.674
ENSDORG00000016304	Arl5c	89	45.283	ENSDORG00000014770	Arl1	85	45.679

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000016304	Arl5c	99	85.393	ENSAMEG00000004195	ARL5C	99	85.393	Ailuropoda_melanoleuca
ENSDORG00000016304	Arl5c	100	77.654	ENSACAG00000003879	-	100	77.654	Anolis_carolinensis
ENSDORG00000016304	Arl5c	100	88.827	ENSCAFG00000016525	ARL5C	100	88.827	Canis_familiaris
ENSDORG00000016304	Arl5c	100	87.709	ENSCHIG00000008208	ARL5C	100	87.709	Capra_hircus
ENSDORG00000016304	Arl5c	59	84.906	ENSCHOG00000013232	-	100	84.906	Choloepus_hoffmanni
ENSDORG00000016304	Arl5c	99	79.661	ENSCGRG00001000695	Arl5c	99	79.661	Cricetulus_griseus_chok1gshd
ENSDORG00000016304	Arl5c	99	80.226	ENSCGRG00000007376	Arl5c	99	80.226	Cricetulus_griseus_crigri
ENSDORG00000016304	Arl5c	99	88.764	ENSDNOG00000019741	ARL5C	99	88.764	Dasypus_novemcinctus
ENSDORG00000016304	Arl5c	92	87.195	ENSEASG00005001922	ARL5C	76	87.195	Equus_asinus_asinus
ENSDORG00000016304	Arl5c	100	88.268	ENSECAG00000009024	ARL5C	100	88.268	Equus_caballus
ENSDORG00000016304	Arl5c	100	87.709	ENSFCAG00000009962	ARL5C	100	87.709	Felis_catus
ENSDORG00000016304	Arl5c	100	90.503	ENSSTOG00000011104	ARL5C	100	90.503	Ictidomys_tridecemlineatus
ENSDORG00000016304	Arl5c	99	78.090	ENSLACG00000015332	ARL5C	99	78.090	Latimeria_chalumnae
ENSDORG00000016304	Arl5c	99	89.888	ENSLAFG00000018248	ARL5C	99	89.888	Loxodonta_africana
ENSDORG00000016304	Arl5c	99	77.401	ENSMAUG00000012845	Arl5c	87	77.401	Mesocricetus_auratus
ENSDORG00000016304	Arl5c	99	89.888	ENSMICG00000002661	ARL5C	99	89.888	Microcebus_murinus
ENSDORG00000016304	Arl5c	99	77.966	ENSMOCG00000000234	Arl5c	99	77.966	Microtus_ochrogaster
ENSDORG00000016304	Arl5c	100	87.151	MGP_CAROLIEiJ_G0017071	Arl5c	100	87.151	Mus_caroli
ENSDORG00000016304	Arl5c	100	86.592	ENSMUSG00000038352	Arl5c	100	86.592	Mus_musculus
ENSDORG00000016304	Arl5c	99	88.136	MGP_PahariEiJ_G0018200	Arl5c	99	88.136	Mus_pahari
ENSDORG00000016304	Arl5c	100	86.592	MGP_SPRETEiJ_G0017917	Arl5c	100	86.592	Mus_spretus
ENSDORG00000016304	Arl5c	99	87.079	ENSMLUG00000030149	ARL5C	99	87.079	Myotis_lucifugus
ENSDORG00000016304	Arl5c	99	85.955	ENSOGAG00000005894	ARL5C	99	85.955	Otolemur_garnettii
ENSDORG00000016304	Arl5c	100	87.151	ENSOARG00000010377	ARL5C	99	87.151	Ovis_aries
ENSDORG00000016304	Arl5c	100	87.709	ENSPPRG00000000975	ARL5C	100	87.709	Panthera_pardus
ENSDORG00000016304	Arl5c	100	87.151	ENSPTIG00000017487	ARL5C	100	87.151	Panthera_tigris_altaica
ENSDORG00000016304	Arl5c	100	87.151	ENSPEMG00000008932	Arl5c	100	87.151	Peromyscus_maniculatus_bairdii
ENSDORG00000016304	Arl5c	100	88.827	ENSPCOG00000028489	ARL5C	100	88.827	Propithecus_coquereli
ENSDORG00000016304	Arl5c	93	87.425	ENSPVAG00000008495	ARL5C	98	87.425	Pteropus_vampyrus
ENSDORG00000016304	Arl5c	99	85.311	ENSRNOG00000036880	Arl5c	99	85.311	Rattus_norvegicus
ENSDORG00000016304	Arl5c	98	73.295	ENSSBOG00000021022	ARL5C	100	73.295	Saimiri_boliviensis_boliviensis
ENSDORG00000016304	Arl5c	95	77.647	ENSSPUG00000007555	ARL5C	99	79.012	Sphenodon_punctatus
ENSDORG00000016304	Arl5c	99	87.640	ENSTBEG00000007274	ARL5C	99	87.640	Tupaia_belangeri
ENSDORG00000016304	Arl5c	99	87.640	ENSUAMG00000012299	ARL5C	99	87.640	Ursus_americanus
ENSDORG00000016304	Arl5c	99	88.202	ENSUMAG00000017197	ARL5C	99	88.202	Ursus_maritimus
ENSDORG00000016304	Arl5c	100	73.743	ENSXETG00000023713	arl5c	92	73.743	Xenopus_tropicalis