EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSDORG00000016334 (Gene tree)
Gene ID: 105989185
Gene Symbol: Sf1
Alias: -
Full Name: splicing factor 1
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Plus strand
Length: 15481 bases
Position: chrKN672400.1:5357955-5373435
Accession: 105989185
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000023358	KH_1	PF00013.29	2.2e-07	1	1
ENSDORP00000021030	KH_1	PF00013.29	2.3e-07	1	1
ENSDORP00000015370	KH_1	PF00013.29	2.3e-07	1	1
ENSDORP00000021030	zf-CCHC	PF00098.23	0.00015	1	1
ENSDORP00000023358	zf-CCHC	PF00098.23	0.00015	1	1
ENSDORP00000015370	zf-CCHC	PF00098.23	0.00015	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000027825	-	2937	XM_013021044	ENSDORP00000021030	638 (aa)	XP_012876498	A0A1S3FJK3
ENSDORT00000033439	-	3365	XM_013021043	ENSDORP00000023358	639 (aa)	XP_012876497	A0A1S3FKT6
ENSDORT00000016334	-	1929	-	ENSDORP00000015370	642 (aa)	-	UPI000BAD0D2B

Gene Model

Click here to download ENSDORG00000016334's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000016334's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000016334	Sf1	59	80.670	ENSAPOG00000012341	sf1	60	75.814	Acanthochromis_polyacanthus
ENSDORG00000016334	Sf1	99	95.476	ENSAMEG00000017828	SF1	99	95.008	Ailuropoda_melanoleuca
ENSDORG00000016334	Sf1	58	82.713	ENSACIG00000016514	sf1	62	78.043	Amphilophus_citrinellus
ENSDORG00000016334	Sf1	59	80.412	ENSAOCG00000010934	sf1	61	75.878	Amphiprion_ocellaris
ENSDORG00000016334	Sf1	59	80.412	ENSAPEG00000009498	sf1	61	75.878	Amphiprion_percula
ENSDORG00000016334	Sf1	58	82.105	ENSATEG00000001894	sf1	60	77.327	Anabas_testudineus
ENSDORG00000016334	Sf1	100	99.844	ENSANAG00000026664	-	100	99.844	Aotus_nancymaae
ENSDORG00000016334	Sf1	96	87.255	ENSANAG00000022607	-	99	87.562	Aotus_nancymaae
ENSDORG00000016334	Sf1	57	84.282	ENSACLG00000007633	sf1	62	78.947	Astatotilapia_calliptera
ENSDORG00000016334	Sf1	58	86.096	ENSAMXG00000003630	sf1	50	79.218	Astyanax_mexicanus
ENSDORG00000016334	Sf1	100	100.000	ENSBTAG00000001035	SF1	100	100.000	Bos_taurus
ENSDORG00000016334	Sf1	100	100.000	ENSCJAG00000002780	SF1	100	100.000	Callithrix_jacchus
ENSDORG00000016334	Sf1	100	99.843	ENSCAFG00000014239	SF1	100	99.843	Canis_familiaris
ENSDORG00000016334	Sf1	100	100.000	ENSCAFG00020014381	SF1	100	100.000	Canis_lupus_dingo
ENSDORG00000016334	Sf1	100	100.000	ENSCHIG00000025867	SF1	100	100.000	Capra_hircus
ENSDORG00000016334	Sf1	98	78.730	ENSCAPG00000010762	SF1	100	78.730	Cavia_aperea
ENSDORG00000016334	Sf1	98	99.362	ENSCPOG00000012290	SF1	100	99.362	Cavia_porcellus
ENSDORG00000016334	Sf1	100	99.843	ENSCCAG00000037881	SF1	100	99.843	Cebus_capucinus
ENSDORG00000016334	Sf1	100	80.438	ENSCCAG00000023781	-	94	85.159	Cebus_capucinus
ENSDORG00000016334	Sf1	100	100.000	ENSCATG00000011564	SF1	100	100.000	Cercocebus_atys
ENSDORG00000016334	Sf1	83	99.622	ENSCSAG00000007258	SF1	97	99.622	Chlorocebus_sabaeus
ENSDORG00000016334	Sf1	65	93.780	ENSCHOG00000006008	SF1	79	93.780	Choloepus_hoffmanni
ENSDORG00000016334	Sf1	81	86.486	ENSCPBG00000023763	SF1	66	85.135	Chrysemys_picta_bellii
ENSDORG00000016334	Sf1	59	58.115	ENSCING00000005564	-	74	60.372	Ciona_intestinalis
ENSDORG00000016334	Sf1	90	47.746	ENSCSAVG00000009055	-	56	66.667	Ciona_savignyi
ENSDORG00000016334	Sf1	100	100.000	ENSCANG00000042201	SF1	100	100.000	Colobus_angolensis_palliatus
ENSDORG00000016334	Sf1	100	99.531	ENSCGRG00001003677	Sf1	100	99.531	Cricetulus_griseus_chok1gshd
ENSDORG00000016334	Sf1	82	97.905	ENSCGRG00000001708	Sf1	97	97.905	Cricetulus_griseus_crigri
ENSDORG00000016334	Sf1	62	78.571	ENSCSEG00000014375	sf1	57	76.513	Cynoglossus_semilaevis
ENSDORG00000016334	Sf1	58	84.324	ENSCVAG00000001670	sf1	63	79.167	Cyprinodon_variegatus
ENSDORG00000016334	Sf1	79	81.390	ENSDARG00000008188	sf1	72	78.788	Danio_rerio
ENSDORG00000016334	Sf1	83	99.055	ENSDNOG00000001282	SF1	97	99.055	Dasypus_novemcinctus
ENSDORG00000016334	Sf1	92	92.479	ENSETEG00000012830	SF1	82	91.453	Echinops_telfairi
ENSDORG00000016334	Sf1	83	99.244	ENSEASG00005018272	SF1	97	99.244	Equus_asinus_asinus
ENSDORG00000016334	Sf1	83	99.433	ENSECAG00000024544	SF1	97	99.433	Equus_caballus
ENSDORG00000016334	Sf1	62	99.237	ENSEEUG00000001058	SF1	100	99.237	Erinaceus_europaeus
ENSDORG00000016334	Sf1	58	81.481	ENSELUG00000013225	sf1	54	78.282	Esox_lucius
ENSDORG00000016334	Sf1	100	99.843	ENSFCAG00000012231	SF1	100	99.843	Felis_catus
ENSDORG00000016334	Sf1	99	94.696	ENSFDAG00000009833	SF1	99	94.696	Fukomys_damarensis
ENSDORG00000016334	Sf1	59	81.186	ENSFHEG00000022656	sf1	61	76.102	Fundulus_heteroclitus
ENSDORG00000016334	Sf1	52	87.941	ENSGMOG00000007469	sf1	62	87.941	Gadus_morhua
ENSDORG00000016334	Sf1	59	83.896	ENSGAFG00000019284	sf1	78	80.238	Gambusia_affinis
ENSDORG00000016334	Sf1	71	89.011	ENSGAGG00000021691	SF1	72	85.907	Gopherus_agassizii
ENSDORG00000016334	Sf1	58	82.895	ENSHBUG00000011598	sf1	61	77.262	Haplochromis_burtoni
ENSDORG00000016334	Sf1	100	99.687	ENSHGLG00000009541	SF1	100	99.687	Heterocephalus_glaber_female
ENSDORG00000016334	Sf1	68	89.195	ENSHGLG00100008076	-	87	87.037	Heterocephalus_glaber_male
ENSDORG00000016334	Sf1	72	86.765	ENSHGLG00100008255	-	94	86.555	Heterocephalus_glaber_male
ENSDORG00000016334	Sf1	95	85.240	ENSHGLG00100013879	-	99	88.060	Heterocephalus_glaber_male
ENSDORG00000016334	Sf1	59	81.088	ENSHCOG00000011388	sf1	58	76.755	Hippocampus_comes
ENSDORG00000016334	Sf1	73	96.667	ENSSTOG00000024353	-	84	96.667	Ictidomys_tridecemlineatus
ENSDORG00000016334	Sf1	98	100.000	ENSSTOG00000009790	-	100	100.000	Ictidomys_tridecemlineatus
ENSDORG00000016334	Sf1	100	99.844	ENSJJAG00000011788	Sf1	100	99.844	Jaculus_jaculus
ENSDORG00000016334	Sf1	60	82.398	ENSKMAG00000005854	sf1	63	77.283	Kryptolebias_marmoratus
ENSDORG00000016334	Sf1	75	82.461	ENSLBEG00000019836	sf1	64	78.230	Labrus_bergylta
ENSDORG00000016334	Sf1	65	78.333	ENSLACG00000018493	SF1	86	69.533	Latimeria_chalumnae
ENSDORG00000016334	Sf1	58	85.294	ENSLOCG00000002130	sf1	59	80.049	Lepisosteus_oculatus
ENSDORG00000016334	Sf1	99	97.823	ENSLAFG00000007201	SF1	99	97.823	Loxodonta_africana
ENSDORG00000016334	Sf1	100	100.000	ENSMFAG00000033122	SF1	100	100.000	Macaca_fascicularis
ENSDORG00000016334	Sf1	100	99.843	ENSMMUG00000022606	SF1	100	100.000	Macaca_mulatta
ENSDORG00000016334	Sf1	100	100.000	ENSMNEG00000037901	SF1	100	100.000	Macaca_nemestrina
ENSDORG00000016334	Sf1	98	100.000	ENSMLEG00000040706	SF1	99	98.148	Mandrillus_leucophaeus
ENSDORG00000016334	Sf1	59	81.347	ENSMAMG00000001780	sf1	60	77.435	Mastacembelus_armatus
ENSDORG00000016334	Sf1	58	82.632	ENSMZEG00005009196	sf1	61	77.030	Maylandia_zebra
ENSDORG00000016334	Sf1	100	99.216	ENSMAUG00000014064	Sf1	100	99.216	Mesocricetus_auratus
ENSDORG00000016334	Sf1	100	99.844	ENSMICG00000001202	SF1	100	99.844	Microcebus_murinus
ENSDORG00000016334	Sf1	100	99.060	ENSMOCG00000022038	Sf1	100	99.060	Microtus_ochrogaster
ENSDORG00000016334	Sf1	58	81.720	ENSMMOG00000020474	sf1	60	76.399	Mola_mola
ENSDORG00000016334	Sf1	70	94.407	ENSMODG00000029407	SF1	97	94.407	Monodelphis_domestica
ENSDORG00000016334	Sf1	58	82.888	ENSMALG00000020521	sf1	68	76.066	Monopterus_albus
ENSDORG00000016334	Sf1	100	99.374	MGP_CAROLIEiJ_G0022607	Sf1	100	99.625	Mus_caroli
ENSDORG00000016334	Sf1	100	99.374	ENSMUSG00000024949	Sf1	100	99.625	Mus_musculus
ENSDORG00000016334	Sf1	100	99.374	MGP_PahariEiJ_G0014101	Sf1	100	99.625	Mus_pahari
ENSDORG00000016334	Sf1	100	99.374	MGP_SPRETEiJ_G0023518	Sf1	100	99.625	Mus_spretus
ENSDORG00000016334	Sf1	100	98.748	ENSMPUG00000012684	SF1	100	98.748	Mustela_putorius_furo
ENSDORG00000016334	Sf1	99	99.683	ENSMLUG00000015217	-	99	99.683	Myotis_lucifugus
ENSDORG00000016334	Sf1	72	94.530	ENSMLUG00000029800	-	78	94.934	Myotis_lucifugus
ENSDORG00000016334	Sf1	100	99.530	ENSNGAG00000005550	Sf1	100	99.530	Nannospalax_galili
ENSDORG00000016334	Sf1	58	83.690	ENSNBRG00000017606	sf1	61	78.947	Neolamprologus_brichardi
ENSDORG00000016334	Sf1	100	99.844	ENSNLEG00000005236	-	100	99.844	Nomascus_leucogenys
ENSDORG00000016334	Sf1	80	98.246	ENSMEUG00000013424	SF1	97	98.246	Notamacropus_eugenii
ENSDORG00000016334	Sf1	74	99.158	ENSOPRG00000005008	SF1	96	99.158	Ochotona_princeps
ENSDORG00000016334	Sf1	99	93.584	ENSODEG00000006102	-	98	93.584	Octodon_degus
ENSDORG00000016334	Sf1	58	82.895	ENSONIG00000015728	sf1	61	77.262	Oreochromis_niloticus
ENSDORG00000016334	Sf1	63	85.961	ENSOANG00000002909	SF1	96	87.724	Ornithorhynchus_anatinus
ENSDORG00000016334	Sf1	99	99.683	ENSOCUG00000026486	SF1	100	99.683	Oryctolagus_cuniculus
ENSDORG00000016334	Sf1	60	80.612	ENSORLG00000011853	sf1	59	76.794	Oryzias_latipes
ENSDORG00000016334	Sf1	60	80.612	ENSORLG00020011834	sf1	59	76.794	Oryzias_latipes_hni
ENSDORG00000016334	Sf1	58	80.418	ENSORLG00015012855	sf1	59	76.555	Oryzias_latipes_hsok
ENSDORG00000016334	Sf1	60	80.051	ENSOMEG00000005210	sf1	60	77.751	Oryzias_melastigma
ENSDORG00000016334	Sf1	100	99.687	ENSOGAG00000016196	SF1	100	99.687	Otolemur_garnettii
ENSDORG00000016334	Sf1	83	95.126	ENSOARG00000009166	SF1	97	95.126	Ovis_aries
ENSDORG00000016334	Sf1	96	100.000	ENSPPAG00000002799	-	100	100.000	Pan_paniscus
ENSDORG00000016334	Sf1	98	99.841	ENSPPRG00000013566	SF1	100	100.000	Panthera_pardus
ENSDORG00000016334	Sf1	79	99.093	ENSPTIG00000016141	SF1	91	99.093	Panthera_tigris_altaica
ENSDORG00000016334	Sf1	100	99.843	ENSPTRG00000003846	SF1	100	99.843	Pan_troglodytes
ENSDORG00000016334	Sf1	99	98.302	ENSPANG00000020754	SF1	97	99.622	Papio_anubis
ENSDORG00000016334	Sf1	51	79.880	ENSPKIG00000012116	sf1	88	74.499	Paramormyrops_kingsleyae
ENSDORG00000016334	Sf1	55	87.179	ENSPSIG00000003610	SF1	97	75.490	Pelodiscus_sinensis
ENSDORG00000016334	Sf1	100	99.216	ENSPEMG00000010463	Sf1	100	99.216	Peromyscus_maniculatus_bairdii
ENSDORG00000016334	Sf1	100	98.905	ENSPCIG00000018173	SF1	100	98.905	Phascolarctos_cinereus
ENSDORG00000016334	Sf1	59	85.752	ENSPFOG00000013683	sf1	68	81.146	Poecilia_formosa
ENSDORG00000016334	Sf1	58	83.862	ENSPLAG00000018076	sf1	61	79.187	Poecilia_latipinna
ENSDORG00000016334	Sf1	58	83.862	ENSPMEG00000005726	sf1	62	79.426	Poecilia_mexicana
ENSDORG00000016334	Sf1	58	83.113	ENSPREG00000004155	sf1	59	78.708	Poecilia_reticulata
ENSDORG00000016334	Sf1	100	99.687	ENSPPYG00000003098	-	100	99.687	Pongo_abelii
ENSDORG00000016334	Sf1	82	97.909	ENSPCAG00000013631	SF1	78	97.909	Procavia_capensis
ENSDORG00000016334	Sf1	100	99.844	ENSPCOG00000027546	SF1	100	99.844	Propithecus_coquereli
ENSDORG00000016334	Sf1	82	97.909	ENSPVAG00000016938	SF1	79	97.909	Pteropus_vampyrus
ENSDORG00000016334	Sf1	58	82.632	ENSPNYG00000004673	sf1	59	78.199	Pundamilia_nyererei
ENSDORG00000016334	Sf1	58	85.450	ENSPNAG00000013072	sf1	59	79.805	Pygocentrus_nattereri
ENSDORG00000016334	Sf1	100	99.374	ENSRNOG00000021085	Sf1	100	99.374	Rattus_norvegicus
ENSDORG00000016334	Sf1	100	95.931	ENSRBIG00000042818	SF1	100	95.931	Rhinopithecus_bieti
ENSDORG00000016334	Sf1	100	86.314	ENSRROG00000045655	SF1	98	98.431	Rhinopithecus_roxellana
ENSDORG00000016334	Sf1	64	37.674	YLR116W	MSL5	61	43.182	Saccharomyces_cerevisiae
ENSDORG00000016334	Sf1	97	80.417	ENSSBOG00000022267	-	99	81.731	Saimiri_boliviensis_boliviensis
ENSDORG00000016334	Sf1	62	93.532	ENSSHAG00000006841	SF1	75	93.171	Sarcophilus_harrisii
ENSDORG00000016334	Sf1	62	80.549	ENSSFOG00015021978	sf1	55	76.812	Scleropages_formosus
ENSDORG00000016334	Sf1	64	76.112	ENSSMAG00000007549	sf1	63	76.526	Scophthalmus_maximus
ENSDORG00000016334	Sf1	59	79.949	ENSSDUG00000003903	sf1	63	76.402	Seriola_dumerili
ENSDORG00000016334	Sf1	59	79.949	ENSSLDG00000013075	sf1	61	76.402	Seriola_lalandi_dorsalis
ENSDORG00000016334	Sf1	81	95.745	ENSSARG00000008180	SF1	100	95.745	Sorex_araneus
ENSDORG00000016334	Sf1	79	82.759	ENSSPUG00000012907	SF1	86	81.226	Sphenodon_punctatus
ENSDORG00000016334	Sf1	59	80.155	ENSSPAG00000019060	sf1	61	75.878	Stegastes_partitus
ENSDORG00000016334	Sf1	100	99.844	ENSSSCG00000013021	SF1	100	99.844	Sus_scrofa
ENSDORG00000016334	Sf1	84	62.799	ENSTNIG00000004820	sf1	80	69.789	Tetraodon_nigroviridis
ENSDORG00000016334	Sf1	96	84.804	ENSTBEG00000013133	SF1	79	100.000	Tupaia_belangeri
ENSDORG00000016334	Sf1	81	95.174	ENSTTRG00000008857	SF1	96	95.543	Tursiops_truncatus
ENSDORG00000016334	Sf1	82	97.137	ENSUAMG00000011977	SF1	100	97.137	Ursus_americanus
ENSDORG00000016334	Sf1	82	97.609	ENSUMAG00000007268	SF1	93	100.000	Ursus_maritimus
ENSDORG00000016334	Sf1	56	100.000	ENSVPAG00000011912	SF1	66	100.000	Vicugna_pacos
ENSDORG00000016334	Sf1	83	99.622	ENSVVUG00000028585	SF1	97	99.622	Vulpes_vulpes
ENSDORG00000016334	Sf1	97	69.545	ENSXETG00000008434	sf1	68	81.553	Xenopus_tropicalis
ENSDORG00000016334	Sf1	57	85.205	ENSXCOG00000003704	sf1	75	80.941	Xiphophorus_couchianus
ENSDORG00000016334	Sf1	58	83.377	ENSXMAG00000007822	sf1	62	79.236	Xiphophorus_maculatus