EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDORG00000016371 (Gene tree)
Gene ID: 105985802
Gene Symbol: -
Alias: -
Full Name: TSR1%2C ribosome maturation factor
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Minus strand
Length: 14571 bases
Position: chrKN672377.1:7792445-7807015
Accession: 105985802
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000015405	AARP2CN	PF08142.12	9e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000016372	-	2698	XM_013016456	ENSDORP00000015405	803 (aa)	XP_012871910	A0A1S3F6K3

Gene Model

Click here to download ENSDORG00000016371's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000016371's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDORG00000016371	-	97	85.843	ENSDORG00000023234	-	100	85.843

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000016371	-	100	85.980	ENSG00000167721	TSR1	100	86.352	Homo_sapiens
ENSDORG00000016371	-	99	53.589	ENSAPOG00000020891	tsr1	99	55.102	Acanthochromis_polyacanthus
ENSDORG00000016371	-	100	85.117	ENSAMEG00000007599	TSR1	99	85.240	Ailuropoda_melanoleuca
ENSDORG00000016371	-	99	56.173	ENSACIG00000007090	tsr1	99	56.173	Amphilophus_citrinellus
ENSDORG00000016371	-	99	53.966	ENSAOCG00000023284	tsr1	99	55.181	Amphiprion_ocellaris
ENSDORG00000016371	-	94	54.464	ENSAPEG00000008452	tsr1	100	55.754	Amphiprion_percula
ENSDORG00000016371	-	99	52.695	ENSATEG00000021961	tsr1	99	54.012	Anabas_testudineus
ENSDORG00000016371	-	92	69.044	ENSAPLG00000013422	TSR1	100	69.448	Anas_platyrhynchos
ENSDORG00000016371	-	70	57.118	ENSACAG00000000859	TSR1	92	56.818	Anolis_carolinensis
ENSDORG00000016371	-	100	86.816	ENSANAG00000031071	TSR1	100	86.443	Aotus_nancymaae
ENSDORG00000016371	-	99	54.699	ENSACLG00000007595	tsr1	99	55.260	Astatotilapia_calliptera
ENSDORG00000016371	-	50	48.068	ENSAMXG00000008470	tsr1	92	47.727	Astyanax_mexicanus
ENSDORG00000016371	-	100	87.562	ENSBTAG00000004225	TSR1	100	87.562	Bos_taurus
ENSDORG00000016371	-	97	40.025	WBGene00006497	tag-151	96	39.950	Caenorhabditis_elegans
ENSDORG00000016371	-	100	87.065	ENSCJAG00000012456	TSR1	100	86.692	Callithrix_jacchus
ENSDORG00000016371	-	100	85.697	ENSCAFG00000002106	-	100	85.697	Canis_familiaris
ENSDORG00000016371	-	90	84.828	ENSCAFG00000019273	-	100	85.823	Canis_familiaris
ENSDORG00000016371	-	100	85.075	ENSCAFG00020009728	TSR1	100	85.075	Canis_lupus_dingo
ENSDORG00000016371	-	100	87.935	ENSCHIG00000023935	TSR1	100	87.935	Capra_hircus
ENSDORG00000016371	-	100	85.945	ENSTSYG00000005468	TSR1	100	85.821	Carlito_syrichta
ENSDORG00000016371	-	93	85.925	ENSCPOG00000014833	TSR1	99	85.925	Cavia_porcellus
ENSDORG00000016371	-	93	87.131	ENSCCAG00000028962	TSR1	98	87.399	Cebus_capucinus
ENSDORG00000016371	-	100	86.228	ENSCATG00000044262	TSR1	100	86.476	Cercocebus_atys
ENSDORG00000016371	-	100	85.945	ENSCLAG00000005567	TSR1	100	85.697	Chinchilla_lanigera
ENSDORG00000016371	-	100	86.352	ENSCSAG00000013788	TSR1	100	86.600	Chlorocebus_sabaeus
ENSDORG00000016371	-	99	69.750	ENSCPBG00000020363	TSR1	97	69.393	Chrysemys_picta_bellii
ENSDORG00000016371	-	97	46.038	ENSCING00000020658	-	99	45.466	Ciona_intestinalis
ENSDORG00000016371	-	97	45.443	ENSCSAVG00000001875	-	99	45.214	Ciona_savignyi
ENSDORG00000016371	-	100	76.923	ENSCANG00000033056	TSR1	100	74.194	Colobus_angolensis_palliatus
ENSDORG00000016371	-	100	85.590	ENSCGRG00001023942	Tsr1	100	85.466	Cricetulus_griseus_chok1gshd
ENSDORG00000016371	-	100	79.203	ENSCGRG00000013015	Tsr1	100	79.577	Cricetulus_griseus_crigri
ENSDORG00000016371	-	99	53.438	ENSCSEG00000013009	tsr1	99	53.930	Cynoglossus_semilaevis
ENSDORG00000016371	-	99	54.940	ENSCVAG00000000506	tsr1	99	54.733	Cyprinodon_variegatus
ENSDORG00000016371	-	99	53.602	ENSDARG00000007744	tsr1	99	54.212	Danio_rerio
ENSDORG00000016371	-	100	87.065	ENSDNOG00000004715	TSR1	100	88.123	Dasypus_novemcinctus
ENSDORG00000016371	-	97	44.059	FBgn0037073	Tsr1	96	43.688	Drosophila_melanogaster
ENSDORG00000016371	-	92	88.525	ENSETEG00000017534	TSR1	92	88.525	Echinops_telfairi
ENSDORG00000016371	-	96	53.747	ENSEBUG00000013731	TSR1	98	53.747	Eptatretus_burgeri
ENSDORG00000016371	-	100	87.562	ENSEASG00005009302	TSR1	97	87.562	Equus_asinus_asinus
ENSDORG00000016371	-	100	87.687	ENSECAG00000009114	TSR1	100	87.687	Equus_caballus
ENSDORG00000016371	-	99	54.096	ENSELUG00000020984	tsr1	95	55.018	Esox_lucius
ENSDORG00000016371	-	100	87.438	ENSFCAG00000006313	TSR1	100	87.438	Felis_catus
ENSDORG00000016371	-	99	68.765	ENSFALG00000006532	TSR1	99	69.259	Ficedula_albicollis
ENSDORG00000016371	-	100	86.816	ENSFDAG00000006038	TSR1	100	86.443	Fukomys_damarensis
ENSDORG00000016371	-	99	53.541	ENSFHEG00000003626	tsr1	99	54.087	Fundulus_heteroclitus
ENSDORG00000016371	-	99	53.676	ENSGMOG00000010336	tsr1	99	54.034	Gadus_morhua
ENSDORG00000016371	-	99	53.819	ENSGAFG00000012993	tsr1	99	54.831	Gambusia_affinis
ENSDORG00000016371	-	99	53.988	ENSGACG00000010843	tsr1	99	54.479	Gasterosteus_aculeatus
ENSDORG00000016371	-	99	69.048	ENSGAGG00000025619	-	99	69.193	Gopherus_agassizii
ENSDORG00000016371	-	100	86.476	ENSGGOG00000001704	TSR1	100	86.849	Gorilla_gorilla
ENSDORG00000016371	-	99	54.622	ENSHBUG00000017904	tsr1	100	56.138	Haplochromis_burtoni
ENSDORG00000016371	-	97	77.121	ENSHGLG00000015688	-	99	76.864	Heterocephalus_glaber_female
ENSDORG00000016371	-	100	86.443	ENSHGLG00000012806	-	100	86.443	Heterocephalus_glaber_female
ENSDORG00000016371	-	100	86.443	ENSHGLG00100015392	TSR1	100	86.443	Heterocephalus_glaber_male
ENSDORG00000016371	-	99	56.010	ENSHCOG00000001432	tsr1	99	55.886	Hippocampus_comes
ENSDORG00000016371	-	99	53.782	ENSIPUG00000004618	tsr1	99	54.337	Ictalurus_punctatus
ENSDORG00000016371	-	100	86.211	ENSSTOG00000011819	TSR1	100	86.211	Ictidomys_tridecemlineatus
ENSDORG00000016371	-	92	79.675	ENSJJAG00000019505	Tsr1	95	79.539	Jaculus_jaculus
ENSDORG00000016371	-	99	54.600	ENSKMAG00000005763	tsr1	99	54.885	Kryptolebias_marmoratus
ENSDORG00000016371	-	99	53.717	ENSLBEG00000021823	tsr1	99	53.911	Labrus_bergylta
ENSDORG00000016371	-	99	62.776	ENSLACG00000002197	TSR1	99	64.128	Latimeria_chalumnae
ENSDORG00000016371	-	99	50.798	ENSLOCG00000006491	TSR1	98	50.983	Lepisosteus_oculatus
ENSDORG00000016371	-	100	86.476	ENSMFAG00000021330	TSR1	100	86.725	Macaca_fascicularis
ENSDORG00000016371	-	100	86.228	ENSMMUG00000017519	TSR1	100	86.476	Macaca_mulatta
ENSDORG00000016371	-	100	86.104	ENSMNEG00000031382	TSR1	100	86.352	Macaca_nemestrina
ENSDORG00000016371	-	100	86.104	ENSMLEG00000036733	TSR1	100	86.352	Mandrillus_leucophaeus
ENSDORG00000016371	-	99	53.461	ENSMAMG00000017918	tsr1	99	54.731	Mastacembelus_armatus
ENSDORG00000016371	-	99	55.114	ENSMZEG00005007477	tsr1	99	55.676	Maylandia_zebra
ENSDORG00000016371	-	99	67.778	ENSMGAG00000005576	TSR1	99	67.857	Meleagris_gallopavo
ENSDORG00000016371	-	100	87.935	ENSMICG00000012943	TSR1	100	87.935	Microcebus_murinus
ENSDORG00000016371	-	100	84.348	ENSMOCG00000022764	Tsr1	100	84.969	Microtus_ochrogaster
ENSDORG00000016371	-	99	53.827	ENSMMOG00000014280	tsr1	99	54.933	Mola_mola
ENSDORG00000016371	-	100	77.019	ENSMODG00000010658	TSR1	100	77.019	Monodelphis_domestica
ENSDORG00000016371	-	99	53.976	ENSMALG00000011681	tsr1	99	55.181	Monopterus_albus
ENSDORG00000016371	-	100	85.572	MGP_CAROLIEiJ_G0016727	Tsr1	100	85.572	Mus_caroli
ENSDORG00000016371	-	100	86.070	ENSMUSG00000038335	Tsr1	100	86.070	Mus_musculus
ENSDORG00000016371	-	100	85.697	MGP_PahariEiJ_G0017864	Tsr1	100	85.697	Mus_pahari
ENSDORG00000016371	-	100	85.945	MGP_SPRETEiJ_G0017570	Tsr1	100	85.945	Mus_spretus
ENSDORG00000016371	-	82	86.565	ENSMPUG00000013000	TSR1	100	86.565	Mustela_putorius_furo
ENSDORG00000016371	-	100	88.433	ENSMLUG00000003505	TSR1	100	88.433	Myotis_lucifugus
ENSDORG00000016371	-	99	54.633	ENSNBRG00000020728	tsr1	99	55.314	Neolamprologus_brichardi
ENSDORG00000016371	-	100	79.104	ENSNLEG00000017184	TSR1	100	80.822	Nomascus_leucogenys
ENSDORG00000016371	-	99	71.785	ENSMEUG00000015828	TSR1	99	72.139	Notamacropus_eugenii
ENSDORG00000016371	-	99	55.772	ENSONIG00000013131	tsr1	99	55.529	Oreochromis_niloticus
ENSDORG00000016371	-	96	72.716	ENSOANG00000008637	TSR1	100	72.458	Ornithorhynchus_anatinus
ENSDORG00000016371	-	100	86.194	ENSOCUG00000014256	TSR1	100	86.194	Oryctolagus_cuniculus
ENSDORG00000016371	-	99	54.041	ENSORLG00000004926	tsr1	99	54.885	Oryzias_latipes
ENSDORG00000016371	-	99	54.106	ENSORLG00020008792	tsr1	99	55.072	Oryzias_latipes_hni
ENSDORG00000016371	-	99	53.920	ENSORLG00015013838	tsr1	99	54.765	Oryzias_latipes_hsok
ENSDORG00000016371	-	99	54.513	ENSOMEG00000004830	tsr1	99	55.193	Oryzias_melastigma
ENSDORG00000016371	-	100	85.943	ENSOGAG00000004492	TSR1	100	86.190	Otolemur_garnettii
ENSDORG00000016371	-	100	88.184	ENSOARG00000015437	TSR1	97	88.184	Ovis_aries
ENSDORG00000016371	-	100	86.104	ENSPPAG00000036355	TSR1	100	86.476	Pan_paniscus
ENSDORG00000016371	-	100	87.562	ENSPPRG00000015519	-	100	87.562	Panthera_pardus
ENSDORG00000016371	-	100	87.811	ENSPTIG00000010608	TSR1	100	87.811	Panthera_tigris_altaica
ENSDORG00000016371	-	100	86.104	ENSPTRG00000008547	TSR1	100	86.476	Pan_troglodytes
ENSDORG00000016371	-	100	82.754	ENSPANG00000024463	TSR1	100	82.878	Papio_anubis
ENSDORG00000016371	-	99	54.827	ENSPKIG00000013972	tsr1	99	54.568	Paramormyrops_kingsleyae
ENSDORG00000016371	-	87	69.242	ENSPSIG00000018258	TSR1	99	69.528	Pelodiscus_sinensis
ENSDORG00000016371	-	99	55.966	ENSPMGG00000011577	tsr1	99	56.950	Periophthalmus_magnuspinnatus
ENSDORG00000016371	-	100	85.075	ENSPEMG00000018033	Tsr1	100	84.701	Peromyscus_maniculatus_bairdii
ENSDORG00000016371	-	100	77.379	ENSPCIG00000009357	TSR1	98	77.998	Phascolarctos_cinereus
ENSDORG00000016371	-	99	53.949	ENSPFOG00000004483	TSR1	99	55.164	Poecilia_formosa
ENSDORG00000016371	-	99	53.875	ENSPLAG00000022320	tsr1	99	54.367	Poecilia_latipinna
ENSDORG00000016371	-	99	53.349	ENSPMEG00000004577	tsr1	99	54.142	Poecilia_mexicana
ENSDORG00000016371	-	97	53.571	ENSPREG00000010354	tsr1	95	54.321	Poecilia_reticulata
ENSDORG00000016371	-	100	78.519	ENSPPYG00000007792	TSR1	100	78.272	Pongo_abelii
ENSDORG00000016371	-	53	95.349	ENSPCAG00000012973	-	72	95.349	Procavia_capensis
ENSDORG00000016371	-	100	87.687	ENSPCOG00000017928	TSR1	100	87.687	Propithecus_coquereli
ENSDORG00000016371	-	100	87.065	ENSPVAG00000002162	TSR1	100	87.313	Pteropus_vampyrus
ENSDORG00000016371	-	99	54.819	ENSPNYG00000016163	tsr1	99	55.381	Pundamilia_nyererei
ENSDORG00000016371	-	99	53.047	ENSPNAG00000008659	tsr1	99	53.644	Pygocentrus_nattereri
ENSDORG00000016371	-	100	85.093	ENSRNOG00000002980	Tsr1	100	85.093	Rattus_norvegicus
ENSDORG00000016371	-	100	86.228	ENSRBIG00000040016	TSR1	100	86.476	Rhinopithecus_bieti
ENSDORG00000016371	-	100	86.104	ENSRROG00000030361	TSR1	100	86.352	Rhinopithecus_roxellana
ENSDORG00000016371	-	96	31.219	YDL060W	-	98	30.635	Saccharomyces_cerevisiae
ENSDORG00000016371	-	100	87.065	ENSSBOG00000020785	TSR1	100	87.313	Saimiri_boliviensis_boliviensis
ENSDORG00000016371	-	100	76.456	ENSSHAG00000011394	TSR1	100	76.704	Sarcophilus_harrisii
ENSDORG00000016371	-	99	56.463	ENSSFOG00015005455	tsr1	99	56.744	Scleropages_formosus
ENSDORG00000016371	-	99	53.892	ENSSMAG00000009504	tsr1	99	54.567	Scophthalmus_maximus
ENSDORG00000016371	-	99	53.772	ENSSDUG00000012074	tsr1	99	55.342	Seriola_dumerili
ENSDORG00000016371	-	99	53.837	ENSSLDG00000002031	tsr1	99	55.355	Seriola_lalandi_dorsalis
ENSDORG00000016371	-	100	74.627	ENSSARG00000000759	TSR1	100	74.627	Sorex_araneus
ENSDORG00000016371	-	99	67.405	ENSSPUG00000007042	TSR1	99	67.897	Sphenodon_punctatus
ENSDORG00000016371	-	99	53.644	ENSSPAG00000021951	tsr1	99	55.156	Stegastes_partitus
ENSDORG00000016371	-	100	87.562	ENSSSCG00000038534	TSR1	100	87.562	Sus_scrofa
ENSDORG00000016371	-	90	71.370	ENSTGUG00000005883	TSR1	100	70.822	Taeniopygia_guttata
ENSDORG00000016371	-	99	55.865	ENSTRUG00000004665	tsr1	99	56.189	Takifugu_rubripes
ENSDORG00000016371	-	99	56.166	ENSTNIG00000016196	tsr1	99	56.634	Tetraodon_nigroviridis
ENSDORG00000016371	-	67	92.308	ENSTBEG00000015275	-	67	92.308	Tupaia_belangeri
ENSDORG00000016371	-	100	87.562	ENSTTRG00000001177	TSR1	100	87.562	Tursiops_truncatus
ENSDORG00000016371	-	100	85.327	ENSUAMG00000025160	TSR1	99	85.438	Ursus_americanus
ENSDORG00000016371	-	97	85.019	ENSUMAG00000009294	TSR1	99	85.019	Ursus_maritimus
ENSDORG00000016371	-	84	83.210	ENSVPAG00000000228	TSR1	100	83.210	Vicugna_pacos
ENSDORG00000016371	-	100	85.572	ENSVVUG00000021767	TSR1	100	85.572	Vulpes_vulpes
ENSDORG00000016371	-	99	58.528	ENSXETG00000023797	tsr1	100	59.840	Xenopus_tropicalis
ENSDORG00000016371	-	99	54.579	ENSXCOG00000009635	tsr1	99	55.392	Xiphophorus_couchianus
ENSDORG00000016371	-	99	54.106	ENSXMAG00000001397	tsr1	96	54.469	Xiphophorus_maculatus