EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDORG00000016433 (Gene tree)
Gene ID: 105997080
Gene Symbol: Vars
Alias: Bat-6|Bat6|D17H6S56E|G7a|Vars2
Full Name: valyl-tRNA synthetase
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Plus strand
Length: 13099 bases
Position: chrKN672484.1:14824-27922
Accession: 105997080
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000015461	tRNA-synt_1g	PF09334.11	1.5e-11	1	1
ENSDORP00000017778	tRNA-synt_1g	PF09334.11	1.5e-11	1	1
ENSDORP00000015461	Anticodon_1	PF08264.13	1.1e-33	1	1
ENSDORP00000017778	Anticodon_1	PF08264.13	1.1e-33	1	1
ENSDORP00000015461	tRNA-synt_1	PF00133.22	4.6e-203	1	1
ENSDORP00000017778	tRNA-synt_1	PF00133.22	4.6e-203	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000016432	-	3354	-	ENSDORP00000015461	1117 (aa)	-	UPI000BACF8B9
ENSDORT00000027941	-	3357	XM_013031380	ENSDORP00000017778	1118 (aa)	XP_012886834	UPI000BAD2425

Gene Model

Click here to download ENSDORG00000016433's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000016433's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDORG00000016433	Vars	77	47.986	ENSDORG00000008516	Vars2	94	47.986

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000016433	Vars	95	93.133	ENSG00000204394	VARS	99	84.049	Homo_sapiens
ENSDORG00000016433	Vars	92	70.067	ENSAPOG00000020691	vars	83	69.804	Acanthochromis_polyacanthus
ENSDORG00000016433	Vars	92	70.067	ENSAPOG00000020921	vars	83	69.804	Acanthochromis_polyacanthus
ENSDORG00000016433	Vars	95	92.387	ENSAMEG00000006417	VARS	84	92.387	Ailuropoda_melanoleuca
ENSDORG00000016433	Vars	94	70.472	ENSACIG00000013752	vars	84	70.388	Amphilophus_citrinellus
ENSDORG00000016433	Vars	99	68.407	ENSAOCG00000002447	vars	85	68.317	Amphiprion_ocellaris
ENSDORG00000016433	Vars	99	68.227	ENSAPEG00000010638	vars	85	68.137	Amphiprion_percula
ENSDORG00000016433	Vars	93	68.476	ENSATEG00000020219	vars	84	69.216	Anabas_testudineus
ENSDORG00000016433	Vars	77	79.118	ENSACAG00000029133	-	79	78.878	Anolis_carolinensis
ENSDORG00000016433	Vars	95	93.603	ENSANAG00000015453	VARS	84	93.603	Aotus_nancymaae
ENSDORG00000016433	Vars	94	70.427	ENSACLG00000025699	vars	79	70.342	Astatotilapia_calliptera
ENSDORG00000016433	Vars	86	72.915	ENSAMXG00000017716	vars	79	72.812	Astyanax_mexicanus
ENSDORG00000016433	Vars	95	92.568	ENSBTAG00000005631	VARS	84	92.568	Bos_taurus
ENSDORG00000016433	Vars	95	93.509	ENSCJAG00000002604	VARS	84	93.509	Callithrix_jacchus
ENSDORG00000016433	Vars	95	92.004	ENSCAFG00000000636	VARS	84	92.004	Canis_familiaris
ENSDORG00000016433	Vars	88	92.167	ENSCAFG00020020790	VARS	80	92.167	Canis_lupus_dingo
ENSDORG00000016433	Vars	94	93.792	ENSCHIG00000011008	VARS	84	92.756	Capra_hircus
ENSDORG00000016433	Vars	95	93.227	ENSTSYG00000001567	VARS	84	93.227	Carlito_syrichta
ENSDORG00000016433	Vars	95	91.533	ENSCAPG00000013736	VARS	92	91.533	Cavia_aperea
ENSDORG00000016433	Vars	95	91.627	ENSCPOG00000000870	VARS	84	91.627	Cavia_porcellus
ENSDORG00000016433	Vars	95	93.227	ENSCCAG00000035656	VARS	100	94.527	Cebus_capucinus
ENSDORG00000016433	Vars	95	92.850	ENSCATG00000022394	VARS	100	90.663	Cercocebus_atys
ENSDORG00000016433	Vars	92	90.047	ENSCLAG00000009470	VARS	85	90.047	Chinchilla_lanigera
ENSDORG00000016433	Vars	95	93.227	ENSCSAG00000008784	VARS	84	93.227	Chlorocebus_sabaeus
ENSDORG00000016433	Vars	87	74.025	ENSCPBG00000007943	VARS	96	74.025	Chrysemys_picta_bellii
ENSDORG00000016433	Vars	95	93.227	ENSCANG00000033570	VARS	84	93.227	Colobus_angolensis_palliatus
ENSDORG00000016433	Vars	95	92.568	ENSCGRG00001005686	Vars	84	92.568	Cricetulus_griseus_chok1gshd
ENSDORG00000016433	Vars	95	87.100	ENSCGRG00000013352	Vars	71	87.100	Cricetulus_griseus_crigri
ENSDORG00000016433	Vars	94	70.000	ENSCSEG00000019652	vars	84	69.905	Cynoglossus_semilaevis
ENSDORG00000016433	Vars	99	69.127	ENSCVAG00000022398	vars	86	69.037	Cyprinodon_variegatus
ENSDORG00000016433	Vars	93	71.797	ENSDARG00000044575	vars	82	72.004	Danio_rerio
ENSDORG00000016433	Vars	71	86.618	ENSETEG00000003824	VARS	71	86.618	Echinops_telfairi
ENSDORG00000016433	Vars	57	70.417	ENSEBUG00000007086	vars	84	69.110	Eptatretus_burgeri
ENSDORG00000016433	Vars	65	61.538	ENSEBUG00000004637	vars	100	61.813	Eptatretus_burgeri
ENSDORG00000016433	Vars	94	94.737	ENSEASG00005015673	VARS	83	94.737	Equus_asinus_asinus
ENSDORG00000016433	Vars	94	93.881	ENSECAG00000014620	VARS	83	94.264	Equus_caballus
ENSDORG00000016433	Vars	76	89.273	ENSEEUG00000004116	VARS	70	89.273	Erinaceus_europaeus
ENSDORG00000016433	Vars	93	70.937	ENSELUG00000006550	vars	80	70.841	Esox_lucius
ENSDORG00000016433	Vars	95	92.286	ENSFCAG00000004510	VARS	84	92.286	Felis_catus
ENSDORG00000016433	Vars	85	89.922	ENSFDAG00000011401	VARS	88	89.922	Fukomys_damarensis
ENSDORG00000016433	Vars	93	71.866	ENSFHEG00000010672	vars	85	68.739	Fundulus_heteroclitus
ENSDORG00000016433	Vars	93	70.526	ENSGMOG00000014908	vars	89	67.623	Gadus_morhua
ENSDORG00000016433	Vars	99	68.767	ENSGAFG00000021630	vars	85	68.677	Gambusia_affinis
ENSDORG00000016433	Vars	93	70.086	ENSGACG00000009601	vars	85	69.990	Gasterosteus_aculeatus
ENSDORG00000016433	Vars	95	93.133	ENSGGOG00000011364	VARS	84	93.133	Gorilla_gorilla
ENSDORG00000016433	Vars	94	70.427	ENSHBUG00000017151	vars	79	70.342	Haplochromis_burtoni
ENSDORG00000016433	Vars	94	91.196	ENSHGLG00000011646	VARS	83	90.622	Heterocephalus_glaber_female
ENSDORG00000016433	Vars	94	82.617	ENSHGLG00100018062	VARS	88	82.523	Heterocephalus_glaber_male
ENSDORG00000016433	Vars	93	70.865	ENSHCOG00000012198	vars	86	68.083	Hippocampus_comes
ENSDORG00000016433	Vars	94	71.265	ENSIPUG00000005218	vars	83	71.265	Ictalurus_punctatus
ENSDORG00000016433	Vars	95	93.797	ENSSTOG00000013112	VARS	84	93.797	Ictidomys_tridecemlineatus
ENSDORG00000016433	Vars	94	76.077	ENSJJAG00000015343	-	85	75.981	Jaculus_jaculus
ENSDORG00000016433	Vars	95	91.157	ENSJJAG00000019749	-	84	91.063	Jaculus_jaculus
ENSDORG00000016433	Vars	94	69.754	ENSKMAG00000009455	vars	84	69.376	Kryptolebias_marmoratus
ENSDORG00000016433	Vars	94	70.265	ENSLBEG00000010341	vars	83	69.431	Labrus_bergylta
ENSDORG00000016433	Vars	82	68.608	ENSLACG00000015232	VARS	82	67.262	Latimeria_chalumnae
ENSDORG00000016433	Vars	93	72.797	ENSLOCG00000004240	vars	83	72.797	Lepisosteus_oculatus
ENSDORG00000016433	Vars	95	90.969	ENSLAFG00000023090	VARS	84	91.345	Loxodonta_africana
ENSDORG00000016433	Vars	95	93.227	ENSMFAG00000001032	VARS	84	93.227	Macaca_fascicularis
ENSDORG00000016433	Vars	95	93.227	ENSMMUG00000006828	VARS	84	93.227	Macaca_mulatta
ENSDORG00000016433	Vars	95	93.227	ENSMNEG00000042072	VARS	84	93.227	Macaca_nemestrina
ENSDORG00000016433	Vars	95	93.133	ENSMLEG00000039307	VARS	84	93.133	Mandrillus_leucophaeus
ENSDORG00000016433	Vars	93	71.388	ENSMAMG00000003949	vars	82	71.292	Mastacembelus_armatus
ENSDORG00000016433	Vars	94	70.427	ENSMZEG00005018327	vars	83	68.618	Maylandia_zebra
ENSDORG00000016433	Vars	95	92.004	ENSMAUG00000006715	Vars	84	92.004	Mesocricetus_auratus
ENSDORG00000016433	Vars	95	92.568	ENSMICG00000003548	VARS	100	93.532	Microcebus_murinus
ENSDORG00000016433	Vars	95	92.192	ENSMOCG00000015404	Vars	86	92.568	Microtus_ochrogaster
ENSDORG00000016433	Vars	93	69.474	ENSMMOG00000015801	vars	82	69.474	Mola_mola
ENSDORG00000016433	Vars	94	86.890	ENSMODG00000015204	-	83	86.890	Monodelphis_domestica
ENSDORG00000016433	Vars	98	68.643	ENSMALG00000022532	vars	86	68.559	Monopterus_albus
ENSDORG00000016433	Vars	95	92.192	MGP_CAROLIEiJ_G0021491	Vars	84	92.568	Mus_caroli
ENSDORG00000016433	Vars	95	92.098	ENSMUSG00000007029	Vars	84	92.474	Mus_musculus
ENSDORG00000016433	Vars	95	92.192	MGP_PahariEiJ_G0020486	Vars	84	92.192	Mus_pahari
ENSDORG00000016433	Vars	95	92.192	MGP_SPRETEiJ_G0022396	Vars	84	92.568	Mus_spretus
ENSDORG00000016433	Vars	95	92.756	ENSMPUG00000010821	VARS	84	92.756	Mustela_putorius_furo
ENSDORG00000016433	Vars	70	90.978	ENSMLUG00000013126	VARS	80	91.614	Myotis_lucifugus
ENSDORG00000016433	Vars	95	92.286	ENSNGAG00000012151	Vars	84	92.286	Nannospalax_galili
ENSDORG00000016433	Vars	94	70.427	ENSNBRG00000020520	vars	82	70.342	Neolamprologus_brichardi
ENSDORG00000016433	Vars	95	92.474	ENSNLEG00000006351	VARS	100	89.078	Nomascus_leucogenys
ENSDORG00000016433	Vars	89	86.190	ENSMEUG00000011378	VARS	78	86.350	Notamacropus_eugenii
ENSDORG00000016433	Vars	95	92.850	ENSOPRG00000003607	VARS	84	92.850	Ochotona_princeps
ENSDORG00000016433	Vars	95	90.687	ENSODEG00000017681	VARS	84	90.687	Octodon_degus
ENSDORG00000016433	Vars	94	70.332	ENSONIG00000013064	vars	91	70.247	Oreochromis_niloticus
ENSDORG00000016433	Vars	68	85.990	ENSOANG00000005400	VARS	78	85.346	Ornithorhynchus_anatinus
ENSDORG00000016433	Vars	89	93.851	ENSOCUG00000022463	VARS	79	94.034	Oryctolagus_cuniculus
ENSDORG00000016433	Vars	93	71.756	ENSORLG00000013063	vars	81	71.770	Oryzias_latipes
ENSDORG00000016433	Vars	93	72.153	ENSORLG00020003504	vars	82	72.057	Oryzias_latipes_hni
ENSDORG00000016433	Vars	93	71.962	ENSORLG00015009001	vars	82	71.866	Oryzias_latipes_hsok
ENSDORG00000016433	Vars	93	71.866	ENSOMEG00000015016	vars	82	71.770	Oryzias_melastigma
ENSDORG00000016433	Vars	95	92.944	ENSOGAG00000007515	VARS	84	92.944	Otolemur_garnettii
ENSDORG00000016433	Vars	95	93.321	ENSPPAG00000034012	VARS	84	93.321	Pan_paniscus
ENSDORG00000016433	Vars	95	92.474	ENSPPRG00000014855	VARS	84	92.474	Panthera_pardus
ENSDORG00000016433	Vars	86	92.842	ENSPTIG00000010462	VARS	85	92.791	Panthera_tigris_altaica
ENSDORG00000016433	Vars	95	93.227	ENSPTRG00000017985	VARS	84	93.227	Pan_troglodytes
ENSDORG00000016433	Vars	95	91.284	ENSPANG00000014565	VARS	84	91.284	Papio_anubis
ENSDORG00000016433	Vars	94	68.685	ENSPKIG00000016304	vars	86	68.685	Paramormyrops_kingsleyae
ENSDORG00000016433	Vars	93	71.237	ENSPMGG00000023909	vars	83	71.141	Periophthalmus_magnuspinnatus
ENSDORG00000016433	Vars	93	94.253	ENSPEMG00000006639	Vars	83	94.253	Peromyscus_maniculatus_bairdii
ENSDORG00000016433	Vars	93	85.920	ENSPCIG00000018553	VARS	83	85.920	Phascolarctos_cinereus
ENSDORG00000016433	Vars	99	68.947	ENSPFOG00000015690	vars	85	68.857	Poecilia_formosa
ENSDORG00000016433	Vars	99	69.037	ENSPLAG00000009590	vars	84	71.606	Poecilia_latipinna
ENSDORG00000016433	Vars	99	68.947	ENSPMEG00000004708	vars	85	68.857	Poecilia_mexicana
ENSDORG00000016433	Vars	87	72.393	ENSPREG00000013264	vars	80	72.393	Poecilia_reticulata
ENSDORG00000016433	Vars	95	91.063	ENSPPYG00000016460	VARS	84	91.063	Pongo_abelii
ENSDORG00000016433	Vars	79	91.921	ENSPCAG00000013565	VARS	70	91.921	Procavia_capensis
ENSDORG00000016433	Vars	95	92.575	ENSPCOG00000010942	VARS	84	92.951	Propithecus_coquereli
ENSDORG00000016433	Vars	95	91.157	ENSPVAG00000012403	VARS	84	91.157	Pteropus_vampyrus
ENSDORG00000016433	Vars	94	70.427	ENSPNYG00000022511	vars	82	70.342	Pundamilia_nyererei
ENSDORG00000016433	Vars	93	71.660	ENSPNAG00000020962	vars	87	69.792	Pygocentrus_nattereri
ENSDORG00000016433	Vars	95	92.568	ENSRNOG00000000867	Vars	84	92.568	Rattus_norvegicus
ENSDORG00000016433	Vars	95	93.227	ENSRBIG00000041669	VARS	100	91.155	Rhinopithecus_bieti
ENSDORG00000016433	Vars	95	93.227	ENSRROG00000045490	VARS	84	93.227	Rhinopithecus_roxellana
ENSDORG00000016433	Vars	95	93.227	ENSSBOG00000035402	VARS	84	93.227	Saimiri_boliviensis_boliviensis
ENSDORG00000016433	Vars	94	85.550	ENSSHAG00000006937	VARS	82	85.550	Sarcophilus_harrisii
ENSDORG00000016433	Vars	93	70.683	ENSSFOG00015014272	vars	82	71.602	Scleropages_formosus
ENSDORG00000016433	Vars	99	67.235	ENSSMAG00000009596	vars	85	67.327	Scophthalmus_maximus
ENSDORG00000016433	Vars	94	70.711	ENSSDUG00000014177	vars	86	68.227	Seriola_dumerili
ENSDORG00000016433	Vars	94	70.616	ENSSLDG00000025316	vars	86	68.227	Seriola_lalandi_dorsalis
ENSDORG00000016433	Vars	93	70.992	ENSSPAG00000017068	vars	86	68.317	Stegastes_partitus
ENSDORG00000016433	Vars	94	91.874	ENSSSCG00000038950	VARS	83	92.256	Sus_scrofa
ENSDORG00000016433	Vars	72	72.035	ENSTRUG00000012307	vars	75	71.801	Takifugu_rubripes
ENSDORG00000016433	Vars	99	67.774	ENSTNIG00000008011	vars	89	67.777	Tetraodon_nigroviridis
ENSDORG00000016433	Vars	50	97.004	ENSTBEG00000004728	-	50	97.004	Tupaia_belangeri
ENSDORG00000016433	Vars	95	82.408	ENSTTRG00000014128	VARS	84	82.408	Tursiops_truncatus
ENSDORG00000016433	Vars	95	90.292	ENSUAMG00000010424	VARS	83	90.292	Ursus_americanus
ENSDORG00000016433	Vars	87	91.449	ENSUMAG00000013486	VARS	81	91.449	Ursus_maritimus
ENSDORG00000016433	Vars	95	91.729	ENSVVUG00000021323	VARS	84	91.541	Vulpes_vulpes
ENSDORG00000016433	Vars	95	66.019	ENSXETG00000024076	vars	85	66.019	Xenopus_tropicalis
ENSDORG00000016433	Vars	94	70.688	ENSXCOG00000019172	vars	85	70.594	Xiphophorus_couchianus
ENSDORG00000016433	Vars	99	68.857	ENSXMAG00000010927	vars	85	68.767	Xiphophorus_maculatus