EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSDORG00000016464 (Gene tree)
Gene ID: 105996254
Gene Symbol: Trex1
Alias: -
Full Name: three prime repair exonuclease 1
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Plus strand
Length: 1418 bases
Position: chrKN672474.1:16900-18317
Accession: 105996254
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000016038	RNase_T	PF00929.24	0.00014	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000016463	-	1046	XM_013030268	ENSDORP00000016038	303 (aa)	XP_012885722	A0A1S3GCH9

Gene Model

Click here to download ENSDORG00000016464's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000016464's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000016464	Trex1	72	44.091	ENSAMEG00000008933	TREX2	79	44.091	Ailuropoda_melanoleuca
ENSDORG00000016464	Trex1	73	46.696	ENSACAG00000008936	TREX1	94	46.696	Anolis_carolinensis
ENSDORG00000016464	Trex1	74	42.478	ENSACAG00000012912	TREX2	95	42.478	Anolis_carolinensis
ENSDORG00000016464	Trex1	72	44.091	ENSCAFG00000019185	TREX2	79	44.091	Canis_familiaris
ENSDORG00000016464	Trex1	72	43.836	ENSCAFG00020023190	TREX2	70	43.836	Canis_lupus_dingo
ENSDORG00000016464	Trex1	74	45.133	ENSCAPG00000004768	TREX2	84	45.133	Cavia_aperea
ENSDORG00000016464	Trex1	74	45.133	ENSCPOG00000025702	TREX2	95	45.133	Cavia_porcellus
ENSDORG00000016464	Trex1	73	45.495	ENSCLAG00000002698	TREX2	94	45.495	Chinchilla_lanigera
ENSDORG00000016464	Trex1	74	42.152	ENSCPBG00000008273	TREX2	81	42.152	Chrysemys_picta_bellii
ENSDORG00000016464	Trex1	74	43.363	ENSCGRG00001012110	Trex2	95	43.363	Cricetulus_griseus_chok1gshd
ENSDORG00000016464	Trex1	70	34.091	ENSEBUG00000006412	TREX1	84	34.091	Eptatretus_burgeri
ENSDORG00000016464	Trex1	72	44.091	ENSEASG00005019558	TREX2	80	44.091	Equus_asinus_asinus
ENSDORG00000016464	Trex1	72	44.091	ENSECAG00000016012	TREX2	80	44.091	Equus_caballus
ENSDORG00000016464	Trex1	73	43.891	ENSFCAG00000018938	TREX2	93	43.891	Felis_catus
ENSDORG00000016464	Trex1	72	45.909	ENSFDAG00000014463	TREX2	93	45.909	Fukomys_damarensis
ENSDORG00000016464	Trex1	74	44.248	ENSHGLG00000008010	TREX2	95	44.248	Heterocephalus_glaber_female
ENSDORG00000016464	Trex1	74	44.248	ENSHGLG00100011918	TREX2	95	44.248	Heterocephalus_glaber_male
ENSDORG00000016464	Trex1	74	44.690	ENSSTOG00000027213	TREX2	95	44.690	Ictidomys_tridecemlineatus
ENSDORG00000016464	Trex1	74	44.690	ENSJJAG00000012484	Trex2	95	44.690	Jaculus_jaculus
ENSDORG00000016464	Trex1	75	41.410	ENSLACG00000000797	-	90	41.410	Latimeria_chalumnae
ENSDORG00000016464	Trex1	74	43.805	ENSMOCG00000001305	Trex2	95	43.805	Microtus_ochrogaster
ENSDORG00000016464	Trex1	72	42.986	ENSMODG00000025322	-	91	42.986	Monodelphis_domestica
ENSDORG00000016464	Trex1	72	43.891	ENSMODG00000022848	-	91	43.891	Monodelphis_domestica
ENSDORG00000016464	Trex1	74	43.805	MGP_CAROLIEiJ_G0033149	Trex2	95	43.805	Mus_caroli
ENSDORG00000016464	Trex1	74	43.805	ENSMUSG00000031372	Trex2	95	43.805	Mus_musculus
ENSDORG00000016464	Trex1	74	43.363	MGP_PahariEiJ_G0031692	Trex2	95	43.363	Mus_pahari
ENSDORG00000016464	Trex1	74	43.805	MGP_SPRETEiJ_G0034304	Trex2	95	43.805	Mus_spretus
ENSDORG00000016464	Trex1	74	43.805	ENSMPUG00000019552	TREX2	95	43.805	Mustela_putorius_furo
ENSDORG00000016464	Trex1	72	44.545	ENSMLUG00000027143	TREX2	93	44.545	Myotis_lucifugus
ENSDORG00000016464	Trex1	72	42.727	ENSMEUG00000016646	TREX2	97	42.727	Notamacropus_eugenii
ENSDORG00000016464	Trex1	72	45.000	ENSODEG00000019142	TREX2	85	45.000	Octodon_degus
ENSDORG00000016464	Trex1	72	41.818	ENSOANG00000000686	TREX2	94	41.818	Ornithorhynchus_anatinus
ENSDORG00000016464	Trex1	72	44.091	ENSOGAG00000033175	TREX2	86	44.091	Otolemur_garnettii
ENSDORG00000016464	Trex1	73	44.796	ENSPPRG00000017457	TREX2	93	44.796	Panthera_pardus
ENSDORG00000016464	Trex1	71	40.465	ENSPSIG00000006116	TREX2	89	40.465	Pelodiscus_sinensis
ENSDORG00000016464	Trex1	72	43.182	ENSPEMG00000004918	Trex2	93	43.182	Peromyscus_maniculatus_bairdii
ENSDORG00000016464	Trex1	72	41.364	ENSPCIG00000009700	TREX2	92	41.364	Phascolarctos_cinereus
ENSDORG00000016464	Trex1	72	45.455	ENSPCAG00000005411	TREX2	84	45.455	Procavia_capensis
ENSDORG00000016464	Trex1	72	44.091	ENSPVAG00000001122	TREX2	80	44.091	Pteropus_vampyrus
ENSDORG00000016464	Trex1	74	43.363	ENSRNOG00000056983	Trex2	95	43.363	Rattus_norvegicus
ENSDORG00000016464	Trex1	72	43.439	ENSSHAG00000004059	TREX2	92	43.439	Sarcophilus_harrisii
ENSDORG00000016464	Trex1	73	41.704	ENSSPUG00000012477	-	90	41.704	Sphenodon_punctatus
ENSDORG00000016464	Trex1	81	40.486	ENSSPUG00000012496	-	96	40.486	Sphenodon_punctatus
ENSDORG00000016464	Trex1	73	41.704	ENSSPUG00000012467	-	90	41.704	Sphenodon_punctatus
ENSDORG00000016464	Trex1	73	41.704	ENSSPUG00000012485	-	90	41.704	Sphenodon_punctatus
ENSDORG00000016464	Trex1	72	39.648	ENSSPUG00000015575	-	93	39.648	Sphenodon_punctatus
ENSDORG00000016464	Trex1	72	44.545	ENSUAMG00000027544	TREX2	82	44.545	Ursus_americanus
ENSDORG00000016464	Trex1	72	44.091	ENSVVUG00000029714	TREX2	82	44.091	Vulpes_vulpes