EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSDORG00000016471 (Gene tree)
Gene ID: 105982120
Gene Symbol: Eif3c
Alias: 110kDa|3230401O13Rik|Eif3s8|NIPIL(A3)|Xs|Xsl
Full Name: eukaryotic translation initiation factor 3 subunit C
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Minus strand
Length: 14415 bases
Position: chrKN672360.1:4996669-5011083
Accession: 105982120
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000018292	eIF-3c_N	PF05470.12	1.4e-271	1	1
ENSDORP00000015497	eIF-3c_N	PF05470.12	9.7e-262	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000029080	-	2902	XM_013011574	ENSDORP00000018292	913 (aa)	XP_012867028	A0A1S3ERJ7
ENSDORT00000016471	-	2649	-	ENSDORP00000015497	882 (aa)	-	UPI000BAD2A4B

Gene Model

Click here to download ENSDORG00000016471's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000016471's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000016471	Eif3c	100	98.249	ENSG00000205609	EIF3CL	100	98.249	Homo_sapiens
ENSDORG00000016471	Eif3c	100	98.357	ENSG00000184110	EIF3C	100	100.000	Homo_sapiens
ENSDORG00000016471	Eif3c	99	75.840	ENSAPOG00000024092	eif3c	92	84.176	Acanthochromis_polyacanthus
ENSDORG00000016471	Eif3c	100	98.795	ENSAMEG00000015454	-	100	98.795	Ailuropoda_melanoleuca
ENSDORG00000016471	Eif3c	99	73.377	ENSACIG00000015082	eif3c	93	83.721	Amphilophus_citrinellus
ENSDORG00000016471	Eif3c	94	83.993	ENSAOCG00000021466	eif3c	98	76.170	Amphiprion_ocellaris
ENSDORG00000016471	Eif3c	94	83.993	ENSAPEG00000010521	eif3c	98	76.170	Amphiprion_percula
ENSDORG00000016471	Eif3c	99	76.165	ENSATEG00000019001	eif3c	98	76.522	Anabas_testudineus
ENSDORG00000016471	Eif3c	100	86.572	ENSACAG00000005937	-	100	86.681	Anolis_carolinensis
ENSDORG00000016471	Eif3c	100	98.248	ENSANAG00000020640	-	100	98.248	Aotus_nancymaae
ENSDORG00000016471	Eif3c	99	74.403	ENSACLG00000009347	eif3c	94	83.306	Astatotilapia_calliptera
ENSDORG00000016471	Eif3c	88	80.456	ENSACLG00000009322	eif3c	93	80.456	Astatotilapia_calliptera
ENSDORG00000016471	Eif3c	99	76.374	ENSAMXG00000020949	eif3c	98	75.328	Astyanax_mexicanus
ENSDORG00000016471	Eif3c	100	98.138	ENSBTAG00000006543	EIF3CL	100	98.138	Bos_taurus
ENSDORG00000016471	Eif3c	95	42.601	WBGene00001226	eif-3.C	93	42.793	Caenorhabditis_elegans
ENSDORG00000016471	Eif3c	100	98.138	ENSCJAG00000006341	-	100	98.138	Callithrix_jacchus
ENSDORG00000016471	Eif3c	100	98.576	ENSCAFG00000017143	-	100	98.576	Canis_familiaris
ENSDORG00000016471	Eif3c	100	98.686	ENSCAFG00020017587	-	100	98.686	Canis_lupus_dingo
ENSDORG00000016471	Eif3c	100	98.028	ENSCHIG00000024795	-	100	98.028	Capra_hircus
ENSDORG00000016471	Eif3c	100	98.248	ENSTSYG00000003486	-	100	98.248	Carlito_syrichta
ENSDORG00000016471	Eif3c	96	89.694	ENSCAPG00000015887	-	100	89.694	Cavia_aperea
ENSDORG00000016471	Eif3c	100	99.124	ENSCPOG00000007533	-	100	99.124	Cavia_porcellus
ENSDORG00000016471	Eif3c	99	83.040	ENSCCAG00000029099	-	99	81.758	Cebus_capucinus
ENSDORG00000016471	Eif3c	100	92.881	ENSCCAG00000027724	-	100	92.114	Cebus_capucinus
ENSDORG00000016471	Eif3c	100	97.152	ENSCCAG00000034928	-	100	97.152	Cebus_capucinus
ENSDORG00000016471	Eif3c	100	98.248	ENSCATG00000032673	-	100	98.248	Cercocebus_atys
ENSDORG00000016471	Eif3c	100	98.357	ENSCLAG00000011094	-	100	98.357	Chinchilla_lanigera
ENSDORG00000016471	Eif3c	100	98.248	ENSCSAG00000006297	-	100	98.248	Chlorocebus_sabaeus
ENSDORG00000016471	Eif3c	57	81.467	ENSCHOG00000003120	-	88	81.467	Choloepus_hoffmanni
ENSDORG00000016471	Eif3c	71	92.038	ENSCPBG00000012407	-	88	91.667	Chrysemys_picta_bellii
ENSDORG00000016471	Eif3c	92	50.000	ENSCSAVG00000006744	-	96	56.667	Ciona_savignyi
ENSDORG00000016471	Eif3c	100	98.248	ENSCANG00000033626	-	100	98.248	Colobus_angolensis_palliatus
ENSDORG00000016471	Eif3c	100	97.809	ENSCGRG00001015265	EIF3C	100	97.809	Cricetulus_griseus_chok1gshd
ENSDORG00000016471	Eif3c	100	74.672	ENSCSEG00000017770	eif3c	100	74.672	Cynoglossus_semilaevis
ENSDORG00000016471	Eif3c	99	75.163	ENSCVAG00000005402	eif3c	98	81.494	Cyprinodon_variegatus
ENSDORG00000016471	Eif3c	99	75.817	ENSDARG00000016443	eif3c	98	75.626	Danio_rerio
ENSDORG00000016471	Eif3c	100	98.357	ENSDNOG00000031497	-	100	98.357	Dasypus_novemcinctus
ENSDORG00000016471	Eif3c	69	57.025	FBgn0034258	eIF3c	95	49.780	Drosophila_melanogaster
ENSDORG00000016471	Eif3c	92	98.624	ENSETEG00000013527	-	92	98.624	Echinops_telfairi
ENSDORG00000016471	Eif3c	99	62.768	ENSEBUG00000001629	eif3c	99	63.402	Eptatretus_burgeri
ENSDORG00000016471	Eif3c	100	98.467	ENSECAG00000008746	-	100	98.467	Equus_caballus
ENSDORG00000016471	Eif3c	67	63.946	ENSEEUG00000000726	-	64	63.946	Erinaceus_europaeus
ENSDORG00000016471	Eif3c	87	97.870	ENSEEUG00000006148	-	100	97.870	Erinaceus_europaeus
ENSDORG00000016471	Eif3c	99	75.517	ENSELUG00000022257	eif3c	92	83.250	Esox_lucius
ENSDORG00000016471	Eif3c	100	98.795	ENSFCAG00000015782	-	100	98.795	Felis_catus
ENSDORG00000016471	Eif3c	100	98.795	ENSFDAG00000003588	-	100	98.795	Fukomys_damarensis
ENSDORG00000016471	Eif3c	99	75.784	ENSFHEG00000014154	EIF3C	93	83.497	Fundulus_heteroclitus
ENSDORG00000016471	Eif3c	97	74.552	ENSGMOG00000016885	eif3c	99	74.664	Gadus_morhua
ENSDORG00000016471	Eif3c	96	76.531	ENSGACG00000007652	eif3c	100	75.573	Gasterosteus_aculeatus
ENSDORG00000016471	Eif3c	92	83.589	ENSGAGG00000006666	-	100	83.707	Gopherus_agassizii
ENSDORG00000016471	Eif3c	99	95.930	ENSGGOG00000026919	EIF3C	100	98.180	Gorilla_gorilla
ENSDORG00000016471	Eif3c	54	97.297	ENSGGOG00000022677	-	100	97.297	Gorilla_gorilla
ENSDORG00000016471	Eif3c	100	98.795	ENSHGLG00000011445	EIF3C	100	98.795	Heterocephalus_glaber_female
ENSDORG00000016471	Eif3c	100	98.795	ENSHGLG00100000217	EIF3C	100	98.795	Heterocephalus_glaber_male
ENSDORG00000016471	Eif3c	99	75.787	ENSHCOG00000019694	eif3c	98	75.463	Hippocampus_comes
ENSDORG00000016471	Eif3c	99	75.244	ENSIPUG00000016878	eif3c	98	75.952	Ictalurus_punctatus
ENSDORG00000016471	Eif3c	100	98.795	ENSSTOG00000021278	-	100	98.795	Ictidomys_tridecemlineatus
ENSDORG00000016471	Eif3c	100	98.248	ENSJJAG00000012722	Eif3c	100	98.248	Jaculus_jaculus
ENSDORG00000016471	Eif3c	99	76.451	ENSKMAG00000021662	eif3c	97	75.380	Kryptolebias_marmoratus
ENSDORG00000016471	Eif3c	99	75.580	ENSLBEG00000023370	eif3c	99	74.434	Labrus_bergylta
ENSDORG00000016471	Eif3c	100	78.517	ENSLACG00000000770	eif3c	100	79.978	Latimeria_chalumnae
ENSDORG00000016471	Eif3c	100	98.028	ENSLAFG00000027426	-	100	98.028	Loxodonta_africana
ENSDORG00000016471	Eif3c	100	98.248	ENSMFAG00000041930	-	100	98.248	Macaca_fascicularis
ENSDORG00000016471	Eif3c	100	98.248	ENSMMUG00000011798	-	100	98.248	Macaca_mulatta
ENSDORG00000016471	Eif3c	100	98.248	ENSMNEG00000023915	-	100	98.248	Macaca_nemestrina
ENSDORG00000016471	Eif3c	100	98.248	ENSMLEG00000027529	-	100	98.248	Mandrillus_leucophaeus
ENSDORG00000016471	Eif3c	99	75.670	ENSMAMG00000012512	eif3c	95	84.500	Mastacembelus_armatus
ENSDORG00000016471	Eif3c	88	80.619	ENSMZEG00005013685	eif3c	93	80.619	Maylandia_zebra
ENSDORG00000016471	Eif3c	99	73.986	ENSMZEG00005013699	eif3c	94	83.306	Maylandia_zebra
ENSDORG00000016471	Eif3c	100	97.700	ENSMAUG00000010621	Eif3c	100	97.700	Mesocricetus_auratus
ENSDORG00000016471	Eif3c	100	98.357	ENSMICG00000036748	-	100	98.357	Microcebus_murinus
ENSDORG00000016471	Eif3c	100	95.619	ENSMOCG00000004204	Eif3c	100	95.619	Microtus_ochrogaster
ENSDORG00000016471	Eif3c	100	71.882	ENSMMOG00000001572	eif3c	91	82.508	Mola_mola
ENSDORG00000016471	Eif3c	100	95.077	ENSMODG00000015579	-	100	95.077	Monodelphis_domestica
ENSDORG00000016471	Eif3c	99	74.157	ENSMALG00000008907	eif3c	92	84.272	Monopterus_albus
ENSDORG00000016471	Eif3c	100	97.371	MGP_CAROLIEiJ_G0030451	Eif3c	100	97.371	Mus_caroli
ENSDORG00000016471	Eif3c	100	97.371	ENSMUSG00000030738	Eif3c	100	97.371	Mus_musculus
ENSDORG00000016471	Eif3c	100	96.714	MGP_PahariEiJ_G0013661	Eif3c	100	96.714	Mus_pahari
ENSDORG00000016471	Eif3c	100	97.371	MGP_SPRETEiJ_G0031565	Eif3c	100	97.371	Mus_spretus
ENSDORG00000016471	Eif3c	96	98.068	ENSMPUG00000012732	-	100	98.068	Mustela_putorius_furo
ENSDORG00000016471	Eif3c	100	97.700	ENSMLUG00000015558	-	100	97.700	Myotis_lucifugus
ENSDORG00000016471	Eif3c	93	87.273	ENSNGAG00000010901	-	98	87.273	Nannospalax_galili
ENSDORG00000016471	Eif3c	100	98.795	ENSNGAG00000007177	-	100	98.795	Nannospalax_galili
ENSDORG00000016471	Eif3c	100	82.956	ENSNLEG00000001425	-	91	93.333	Nomascus_leucogenys
ENSDORG00000016471	Eif3c	89	63.924	ENSMEUG00000005317	-	93	71.845	Notamacropus_eugenii
ENSDORG00000016471	Eif3c	100	77.923	ENSMEUG00000009939	-	99	78.166	Notamacropus_eugenii
ENSDORG00000016471	Eif3c	100	98.248	ENSOPRG00000000931	-	100	98.248	Ochotona_princeps
ENSDORG00000016471	Eif3c	100	98.795	ENSODEG00000013508	-	100	98.795	Octodon_degus
ENSDORG00000016471	Eif3c	68	63.036	ENSONIG00000011434	eif3c	99	63.036	Oreochromis_niloticus
ENSDORG00000016471	Eif3c	100	91.272	ENSOANG00000011410	-	100	91.272	Ornithorhynchus_anatinus
ENSDORG00000016471	Eif3c	100	98.905	ENSOCUG00000022489	-	100	98.905	Oryctolagus_cuniculus
ENSDORG00000016471	Eif3c	99	75.055	ENSORLG00000006318	eif3c	98	74.942	Oryzias_latipes
ENSDORG00000016471	Eif3c	96	82.112	ENSORLG00020015713	eif3c	96	82.712	Oryzias_latipes_hni
ENSDORG00000016471	Eif3c	99	75.166	ENSORLG00015013772	eif3c	97	74.503	Oryzias_latipes_hsok
ENSDORG00000016471	Eif3c	100	74.329	ENSOMEG00000020450	eif3c	100	74.006	Oryzias_melastigma
ENSDORG00000016471	Eif3c	100	98.357	ENSOGAG00000012737	-	100	98.357	Otolemur_garnettii
ENSDORG00000016471	Eif3c	100	98.028	ENSOARG00000002892	-	100	98.028	Ovis_aries
ENSDORG00000016471	Eif3c	100	98.795	ENSPPRG00000012336	-	100	98.795	Panthera_pardus
ENSDORG00000016471	Eif3c	100	98.795	ENSPTIG00000011712	-	100	98.795	Panthera_tigris_altaica
ENSDORG00000016471	Eif3c	100	98.248	ENSPANG00000021151	-	100	98.248	Papio_anubis
ENSDORG00000016471	Eif3c	99	76.471	ENSPKIG00000002049	eif3c	98	77.015	Paramormyrops_kingsleyae
ENSDORG00000016471	Eif3c	89	84.577	ENSPMGG00000005409	eif3c	94	84.577	Periophthalmus_magnuspinnatus
ENSDORG00000016471	Eif3c	100	96.386	ENSPEMG00000010899	Eif3c	100	96.386	Peromyscus_maniculatus_bairdii
ENSDORG00000016471	Eif3c	100	95.186	ENSPCIG00000025206	-	100	95.186	Phascolarctos_cinereus
ENSDORG00000016471	Eif3c	99	75.353	ENSPFOG00000004476	eif3c	98	75.000	Poecilia_formosa
ENSDORG00000016471	Eif3c	100	73.476	ENSPLAG00000017480	eif3c	92	83.416	Poecilia_latipinna
ENSDORG00000016471	Eif3c	99	75.978	ENSPMEG00000019512	eif3c	98	75.190	Poecilia_mexicana
ENSDORG00000016471	Eif3c	100	73.589	ENSPREG00000023139	eif3c	100	71.916	Poecilia_reticulata
ENSDORG00000016471	Eif3c	100	95.071	ENSPPYG00000007227	-	100	95.071	Pongo_abelii
ENSDORG00000016471	Eif3c	68	98.170	ENSPCAG00000012710	-	100	98.170	Procavia_capensis
ENSDORG00000016471	Eif3c	100	98.795	ENSPCOG00000019289	-	100	98.795	Propithecus_coquereli
ENSDORG00000016471	Eif3c	100	98.248	ENSPVAG00000005804	-	100	98.248	Pteropus_vampyrus
ENSDORG00000016471	Eif3c	65	69.079	ENSPNYG00000016530	eif3c	99	69.079	Pundamilia_nyererei
ENSDORG00000016471	Eif3c	99	76.368	ENSPNAG00000024040	eif3c	93	82.890	Pygocentrus_nattereri
ENSDORG00000016471	Eif3c	100	97.043	ENSRNOG00000018761	Eif3c	100	97.043	Rattus_norvegicus
ENSDORG00000016471	Eif3c	97	98.188	ENSRBIG00000044009	-	98	95.759	Rhinopithecus_bieti
ENSDORG00000016471	Eif3c	100	98.248	ENSRROG00000043626	-	100	98.248	Rhinopithecus_roxellana
ENSDORG00000016471	Eif3c	80	31.550	YMR309C	-	81	30.699	Saccharomyces_cerevisiae
ENSDORG00000016471	Eif3c	100	98.028	ENSSBOG00000032155	-	100	98.028	Saimiri_boliviensis_boliviensis
ENSDORG00000016471	Eif3c	96	94.677	ENSSHAG00000011808	-	100	94.677	Sarcophilus_harrisii
ENSDORG00000016471	Eif3c	99	75.847	ENSSFOG00015021823	eif3c	98	76.201	Scleropages_formosus
ENSDORG00000016471	Eif3c	97	76.629	ENSSMAG00000016638	eif3c	97	76.517	Scophthalmus_maximus
ENSDORG00000016471	Eif3c	100	76.557	ENSSDUG00000023117	eif3c	100	76.357	Seriola_dumerili
ENSDORG00000016471	Eif3c	99	75.813	ENSSLDG00000009706	eif3c	93	83.497	Seriola_lalandi_dorsalis
ENSDORG00000016471	Eif3c	100	83.716	ENSSPUG00000016470	-	100	84.699	Sphenodon_punctatus
ENSDORG00000016471	Eif3c	100	75.758	ENSSPAG00000000426	eif3c	100	75.870	Stegastes_partitus
ENSDORG00000016471	Eif3c	100	98.576	ENSSSCG00000034927	-	100	98.576	Sus_scrofa
ENSDORG00000016471	Eif3c	99	73.848	ENSTRUG00000008951	eif3c	99	74.277	Takifugu_rubripes
ENSDORG00000016471	Eif3c	100	73.696	ENSTNIG00000015210	eif3c	100	74.348	Tetraodon_nigroviridis
ENSDORG00000016471	Eif3c	100	98.248	ENSTTRG00000005880	-	100	98.248	Tursiops_truncatus
ENSDORG00000016471	Eif3c	74	98.779	ENSUAMG00000001127	-	91	100.000	Ursus_americanus
ENSDORG00000016471	Eif3c	100	98.686	ENSUMAG00000010927	-	100	98.686	Ursus_maritimus
ENSDORG00000016471	Eif3c	100	97.152	ENSVVUG00000025970	-	100	97.152	Vulpes_vulpes
ENSDORG00000016471	Eif3c	100	78.078	ENSXETG00000002941	eif3c	100	78.641	Xenopus_tropicalis
ENSDORG00000016471	Eif3c	100	75.270	ENSXMAG00000013796	eif3c	100	74.622	Xiphophorus_maculatus