EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSDORG00000016528 (Gene tree)
Gene ID: 105986643
Gene Symbol: Exosc1
Alias: -
Full Name: exosome component 1
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Minus strand
Length: 8879 bases
Position: chrKN672382.1:1637605-1646483
Accession: 105986643
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000019230	EXOSC1	PF10447.9	4.4e-15	1	1
ENSDORP00000015551	ECR1_N	PF14382.6	2.5e-09	1	1
ENSDORP00000019230	ECR1_N	PF14382.6	3.5e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000016528	-	465	-	ENSDORP00000015551	154 (aa)	-	UPI000BAD26B9
ENSDORT00000036086	-	899	XM_013017661	ENSDORP00000019230	195 (aa)	XP_012873115	A0A1S3FA24

Gene Model

Click here to download ENSDORG00000016528's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000016528's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000016528	Exosc1	100	96.410	ENSG00000171311	EXOSC1	100	96.410	Homo_sapiens
ENSDORG00000016528	Exosc1	98	79.581	ENSAPOG00000007822	exosc1	98	79.581	Acanthochromis_polyacanthus
ENSDORG00000016528	Exosc1	100	97.949	ENSAMEG00000000129	EXOSC1	100	97.949	Ailuropoda_melanoleuca
ENSDORG00000016528	Exosc1	96	79.255	ENSACIG00000018956	exosc1	92	79.255	Amphilophus_citrinellus
ENSDORG00000016528	Exosc1	98	79.581	ENSAOCG00000010699	exosc1	98	79.581	Amphiprion_ocellaris
ENSDORG00000016528	Exosc1	92	70.391	ENSAPEG00000012690	exosc1	96	70.391	Amphiprion_percula
ENSDORG00000016528	Exosc1	98	79.058	ENSATEG00000018683	exosc1	98	79.058	Anabas_testudineus
ENSDORG00000016528	Exosc1	99	84.456	ENSACAG00000002101	EXOSC1	99	84.456	Anolis_carolinensis
ENSDORG00000016528	Exosc1	100	97.949	ENSANAG00000034669	EXOSC1	100	97.949	Aotus_nancymaae
ENSDORG00000016528	Exosc1	98	79.581	ENSACLG00000021243	exosc1	98	79.581	Astatotilapia_calliptera
ENSDORG00000016528	Exosc1	98	81.152	ENSAMXG00000011116	exosc1	98	81.152	Astyanax_mexicanus
ENSDORG00000016528	Exosc1	100	98.462	ENSBTAG00000012699	EXOSC1	100	98.462	Bos_taurus
ENSDORG00000016528	Exosc1	92	32.447	WBGene00012966	exos-1	90	32.447	Caenorhabditis_elegans
ENSDORG00000016528	Exosc1	100	97.436	ENSCJAG00000016586	EXOSC1	100	97.436	Callithrix_jacchus
ENSDORG00000016528	Exosc1	100	97.436	ENSCAFG00000009068	EXOSC1	94	97.436	Canis_familiaris
ENSDORG00000016528	Exosc1	100	97.436	ENSCAFG00020006002	EXOSC1	94	97.436	Canis_lupus_dingo
ENSDORG00000016528	Exosc1	100	98.462	ENSCHIG00000015253	EXOSC1	100	98.462	Capra_hircus
ENSDORG00000016528	Exosc1	100	96.923	ENSTSYG00000000760	EXOSC1	100	96.923	Carlito_syrichta
ENSDORG00000016528	Exosc1	100	97.949	ENSCPOG00000001173	EXOSC1	100	97.949	Cavia_porcellus
ENSDORG00000016528	Exosc1	100	58.385	ENSCCAG00000023986	EXOSC1	100	58.385	Cebus_capucinus
ENSDORG00000016528	Exosc1	100	96.410	ENSCATG00000034114	EXOSC1	100	96.410	Cercocebus_atys
ENSDORG00000016528	Exosc1	100	98.462	ENSCLAG00000002463	EXOSC1	100	98.462	Chinchilla_lanigera
ENSDORG00000016528	Exosc1	100	95.897	ENSCSAG00000005870	EXOSC1	100	95.897	Chlorocebus_sabaeus
ENSDORG00000016528	Exosc1	96	82.888	ENSCHOG00000006477	EXOSC1	100	82.888	Choloepus_hoffmanni
ENSDORG00000016528	Exosc1	54	81.132	ENSCPBG00000011949	EXOSC1	88	81.132	Chrysemys_picta_bellii
ENSDORG00000016528	Exosc1	95	55.615	ENSCING00000022734	-	89	55.615	Ciona_intestinalis
ENSDORG00000016528	Exosc1	95	57.219	ENSCSAVG00000010865	-	95	57.219	Ciona_savignyi
ENSDORG00000016528	Exosc1	100	96.410	ENSCANG00000034159	EXOSC1	100	96.410	Colobus_angolensis_palliatus
ENSDORG00000016528	Exosc1	100	98.052	ENSCGRG00001000335	Exosc1	100	98.052	Cricetulus_griseus_chok1gshd
ENSDORG00000016528	Exosc1	100	98.052	ENSCGRG00000011602	Exosc1	100	98.052	Cricetulus_griseus_crigri
ENSDORG00000016528	Exosc1	98	67.016	ENSCSEG00000007895	exosc1	95	67.016	Cynoglossus_semilaevis
ENSDORG00000016528	Exosc1	98	75.916	ENSCVAG00000016748	exosc1	98	75.916	Cyprinodon_variegatus
ENSDORG00000016528	Exosc1	98	80.105	ENSDARG00000059841	exosc1	98	80.105	Danio_rerio
ENSDORG00000016528	Exosc1	75	97.297	ENSDNOG00000007983	EXOSC1	100	97.297	Dasypus_novemcinctus
ENSDORG00000016528	Exosc1	94	48.677	FBgn0032346	Csl4	92	48.677	Drosophila_melanogaster
ENSDORG00000016528	Exosc1	100	94.872	ENSETEG00000002469	-	100	94.872	Echinops_telfairi
ENSDORG00000016528	Exosc1	99	61.735	ENSEBUG00000008164	exosc1	98	61.735	Eptatretus_burgeri
ENSDORG00000016528	Exosc1	100	87.179	ENSEASG00005008684	EXOSC1	100	87.179	Equus_asinus_asinus
ENSDORG00000016528	Exosc1	61	76.471	ENSECAG00000010621	EXOSC1	71	76.471	Equus_caballus
ENSDORG00000016528	Exosc1	100	96.923	ENSEEUG00000005647	EXOSC1	100	96.923	Erinaceus_europaeus
ENSDORG00000016528	Exosc1	94	80.435	ENSELUG00000017369	exosc1	81	80.435	Esox_lucius
ENSDORG00000016528	Exosc1	100	97.949	ENSFCAG00000040563	EXOSC1	94	97.949	Felis_catus
ENSDORG00000016528	Exosc1	100	83.590	ENSFALG00000008450	EXOSC1	100	83.590	Ficedula_albicollis
ENSDORG00000016528	Exosc1	100	97.949	ENSFDAG00000000846	EXOSC1	100	97.949	Fukomys_damarensis
ENSDORG00000016528	Exosc1	98	76.963	ENSFHEG00000009154	exosc1	98	76.963	Fundulus_heteroclitus
ENSDORG00000016528	Exosc1	98	79.581	ENSGMOG00000008993	exosc1	98	79.581	Gadus_morhua
ENSDORG00000016528	Exosc1	100	72.821	ENSGALG00000039917	EXOSC1	100	86.986	Gallus_gallus
ENSDORG00000016528	Exosc1	98	75.916	ENSGAFG00000010265	exosc1	94	75.916	Gambusia_affinis
ENSDORG00000016528	Exosc1	98	79.581	ENSGACG00000018936	exosc1	98	79.581	Gasterosteus_aculeatus
ENSDORG00000016528	Exosc1	100	84.615	ENSGAGG00000019192	EXOSC1	100	84.615	Gopherus_agassizii
ENSDORG00000016528	Exosc1	100	84.103	ENSGGOG00000003099	EXOSC1	100	84.103	Gorilla_gorilla
ENSDORG00000016528	Exosc1	98	79.581	ENSHBUG00000017857	exosc1	98	79.581	Haplochromis_burtoni
ENSDORG00000016528	Exosc1	100	97.436	ENSHGLG00000016927	EXOSC1	100	97.436	Heterocephalus_glaber_female
ENSDORG00000016528	Exosc1	100	97.436	ENSHGLG00100012208	EXOSC1	100	97.436	Heterocephalus_glaber_male
ENSDORG00000016528	Exosc1	98	78.534	ENSHCOG00000019882	exosc1	98	78.534	Hippocampus_comes
ENSDORG00000016528	Exosc1	98	80.105	ENSIPUG00000007685	exosc1	98	80.105	Ictalurus_punctatus
ENSDORG00000016528	Exosc1	63	83.607	ENSSTOG00000029860	-	93	83.607	Ictidomys_tridecemlineatus
ENSDORG00000016528	Exosc1	100	97.949	ENSSTOG00000006615	EXOSC1	100	97.949	Ictidomys_tridecemlineatus
ENSDORG00000016528	Exosc1	100	97.949	ENSJJAG00000013311	Exosc1	100	97.949	Jaculus_jaculus
ENSDORG00000016528	Exosc1	98	77.604	ENSKMAG00000001202	exosc1	81	77.604	Kryptolebias_marmoratus
ENSDORG00000016528	Exosc1	98	79.058	ENSLBEG00000011448	exosc1	98	79.058	Labrus_bergylta
ENSDORG00000016528	Exosc1	98	73.885	ENSLOCG00000003776	exosc1	99	73.885	Lepisosteus_oculatus
ENSDORG00000016528	Exosc1	100	96.923	ENSLAFG00000015983	EXOSC1	100	96.923	Loxodonta_africana
ENSDORG00000016528	Exosc1	100	96.410	ENSMFAG00000001493	EXOSC1	100	96.410	Macaca_fascicularis
ENSDORG00000016528	Exosc1	100	96.410	ENSMMUG00000020028	EXOSC1	100	96.104	Macaca_mulatta
ENSDORG00000016528	Exosc1	100	96.410	ENSMNEG00000029816	EXOSC1	100	96.410	Macaca_nemestrina
ENSDORG00000016528	Exosc1	100	96.104	ENSMLEG00000027643	EXOSC1	100	96.104	Mandrillus_leucophaeus
ENSDORG00000016528	Exosc1	98	80.105	ENSMAMG00000012200	exosc1	98	80.105	Mastacembelus_armatus
ENSDORG00000016528	Exosc1	98	79.581	ENSMZEG00005007042	exosc1	98	79.581	Maylandia_zebra
ENSDORG00000016528	Exosc1	100	85.128	ENSMAUG00000020462	-	100	85.128	Mesocricetus_auratus
ENSDORG00000016528	Exosc1	100	97.436	ENSMICG00000007664	EXOSC1	100	96.753	Microcebus_murinus
ENSDORG00000016528	Exosc1	97	91.053	ENSMOCG00000017124	-	97	91.053	Microtus_ochrogaster
ENSDORG00000016528	Exosc1	100	98.052	ENSMOCG00000006004	-	100	98.052	Microtus_ochrogaster
ENSDORG00000016528	Exosc1	99	75.817	ENSMMOG00000021403	exosc1	99	75.817	Mola_mola
ENSDORG00000016528	Exosc1	100	93.878	ENSMODG00000004213	EXOSC1	100	93.878	Monodelphis_domestica
ENSDORG00000016528	Exosc1	94	80.435	ENSMALG00000007061	exosc1	92	80.435	Monopterus_albus
ENSDORG00000016528	Exosc1	100	97.403	MGP_CAROLIEiJ_G0022959	Exosc1	100	97.403	Mus_caroli
ENSDORG00000016528	Exosc1	100	96.753	ENSMUSG00000034321	Exosc1	100	96.753	Mus_musculus
ENSDORG00000016528	Exosc1	100	98.052	MGP_PahariEiJ_G0014449	Exosc1	100	98.052	Mus_pahari
ENSDORG00000016528	Exosc1	100	97.403	MGP_SPRETEiJ_G0023880	Exosc1	100	97.403	Mus_spretus
ENSDORG00000016528	Exosc1	100	97.949	ENSMPUG00000017044	EXOSC1	100	97.949	Mustela_putorius_furo
ENSDORG00000016528	Exosc1	100	97.436	ENSMLUG00000009228	EXOSC1	100	97.436	Myotis_lucifugus
ENSDORG00000016528	Exosc1	100	96.410	ENSNGAG00000022033	Exosc1	100	96.410	Nannospalax_galili
ENSDORG00000016528	Exosc1	97	76.667	ENSNBRG00000024007	exosc1	97	76.667	Neolamprologus_brichardi
ENSDORG00000016528	Exosc1	100	96.104	ENSNLEG00000013872	EXOSC1	100	96.104	Nomascus_leucogenys
ENSDORG00000016528	Exosc1	59	93.043	ENSMEUG00000002246	EXOSC1	100	93.043	Notamacropus_eugenii
ENSDORG00000016528	Exosc1	100	96.923	ENSOPRG00000005065	EXOSC1	100	96.923	Ochotona_princeps
ENSDORG00000016528	Exosc1	100	97.949	ENSODEG00000016709	EXOSC1	100	97.949	Octodon_degus
ENSDORG00000016528	Exosc1	98	79.581	ENSONIG00000017683	exosc1	98	79.581	Oreochromis_niloticus
ENSDORG00000016528	Exosc1	59	93.913	ENSOANG00000006563	EXOSC1	98	91.935	Ornithorhynchus_anatinus
ENSDORG00000016528	Exosc1	100	97.449	ENSOCUG00000011898	-	100	97.449	Oryctolagus_cuniculus
ENSDORG00000016528	Exosc1	100	92.308	ENSOCUG00000026461	-	100	92.308	Oryctolagus_cuniculus
ENSDORG00000016528	Exosc1	98	78.125	ENSORLG00000011595	exosc1	98	78.125	Oryzias_latipes
ENSDORG00000016528	Exosc1	98	78.125	ENSORLG00020005831	exosc1	98	78.125	Oryzias_latipes_hni
ENSDORG00000016528	Exosc1	98	78.125	ENSORLG00015004317	exosc1	98	78.125	Oryzias_latipes_hsok
ENSDORG00000016528	Exosc1	97	64.162	ENSOMEG00000013907	exosc1	98	64.162	Oryzias_melastigma
ENSDORG00000016528	Exosc1	100	97.949	ENSOGAG00000016259	EXOSC1	100	97.949	Otolemur_garnettii
ENSDORG00000016528	Exosc1	100	97.949	ENSOARG00000010136	EXOSC1	100	97.949	Ovis_aries
ENSDORG00000016528	Exosc1	100	96.104	ENSPPAG00000039842	EXOSC1	100	96.104	Pan_paniscus
ENSDORG00000016528	Exosc1	100	97.949	ENSPPRG00000023366	EXOSC1	100	97.949	Panthera_pardus
ENSDORG00000016528	Exosc1	100	97.949	ENSPTIG00000017701	EXOSC1	100	97.949	Panthera_tigris_altaica
ENSDORG00000016528	Exosc1	100	96.410	ENSPTRG00000002808	EXOSC1	100	96.410	Pan_troglodytes
ENSDORG00000016528	Exosc1	100	96.410	ENSPANG00000021324	EXOSC1	100	96.410	Papio_anubis
ENSDORG00000016528	Exosc1	98	80.628	ENSPKIG00000016037	exosc1	98	80.628	Paramormyrops_kingsleyae
ENSDORG00000016528	Exosc1	75	82.192	ENSPSIG00000013571	EXOSC1	98	81.148	Pelodiscus_sinensis
ENSDORG00000016528	Exosc1	98	68.063	ENSPMGG00000014002	exosc1	98	68.063	Periophthalmus_magnuspinnatus
ENSDORG00000016528	Exosc1	100	98.052	ENSPEMG00000010710	-	100	98.052	Peromyscus_maniculatus_bairdii
ENSDORG00000016528	Exosc1	95	71.123	ENSPMAG00000000195	exosc1	95	71.123	Petromyzon_marinus
ENSDORG00000016528	Exosc1	100	94.872	ENSPCIG00000002210	EXOSC1	99	94.872	Phascolarctos_cinereus
ENSDORG00000016528	Exosc1	98	75.000	ENSPFOG00000006755	exosc1	94	75.000	Poecilia_formosa
ENSDORG00000016528	Exosc1	98	75.393	ENSPLAG00000005880	exosc1	98	75.393	Poecilia_latipinna
ENSDORG00000016528	Exosc1	98	75.000	ENSPMEG00000015598	exosc1	94	75.000	Poecilia_mexicana
ENSDORG00000016528	Exosc1	98	65.625	ENSPREG00000000405	exosc1	93	65.625	Poecilia_reticulata
ENSDORG00000016528	Exosc1	100	95.897	ENSPPYG00000002531	EXOSC1	100	95.897	Pongo_abelii
ENSDORG00000016528	Exosc1	100	96.923	ENSPCAG00000009135	EXOSC1	100	96.923	Procavia_capensis
ENSDORG00000016528	Exosc1	100	91.282	ENSPCOG00000027539	EXOSC1	100	91.282	Propithecus_coquereli
ENSDORG00000016528	Exosc1	100	97.949	ENSPVAG00000003372	EXOSC1	100	97.949	Pteropus_vampyrus
ENSDORG00000016528	Exosc1	98	79.581	ENSPNYG00000021745	exosc1	98	79.581	Pundamilia_nyererei
ENSDORG00000016528	Exosc1	98	80.105	ENSPNAG00000001944	exosc1	98	80.105	Pygocentrus_nattereri
ENSDORG00000016528	Exosc1	100	98.052	ENSRNOG00000048708	Exosc1	100	98.052	Rattus_norvegicus
ENSDORG00000016528	Exosc1	100	96.410	ENSRBIG00000035618	EXOSC1	100	96.410	Rhinopithecus_bieti
ENSDORG00000016528	Exosc1	100	96.410	ENSRROG00000032589	EXOSC1	100	96.104	Rhinopithecus_roxellana
ENSDORG00000016528	Exosc1	100	97.949	ENSSBOG00000000359	EXOSC1	100	97.949	Saimiri_boliviensis_boliviensis
ENSDORG00000016528	Exosc1	75	96.599	ENSSHAG00000018219	EXOSC1	100	96.599	Sarcophilus_harrisii
ENSDORG00000016528	Exosc1	97	77.368	ENSSFOG00015016289	-	98	77.368	Scleropages_formosus
ENSDORG00000016528	Exosc1	98	81.771	ENSSFOG00015009069	exosc1	99	81.771	Scleropages_formosus
ENSDORG00000016528	Exosc1	98	80.105	ENSSMAG00000003721	exosc1	98	80.105	Scophthalmus_maximus
ENSDORG00000016528	Exosc1	98	80.105	ENSSDUG00000002993	exosc1	98	80.105	Seriola_dumerili
ENSDORG00000016528	Exosc1	98	80.105	ENSSLDG00000025181	exosc1	98	80.105	Seriola_lalandi_dorsalis
ENSDORG00000016528	Exosc1	100	83.077	ENSSARG00000000162	EXOSC1	100	83.077	Sorex_araneus
ENSDORG00000016528	Exosc1	99	82.990	ENSSPUG00000012263	EXOSC1	99	82.990	Sphenodon_punctatus
ENSDORG00000016528	Exosc1	98	71.204	ENSSPAG00000016792	exosc1	82	71.204	Stegastes_partitus
ENSDORG00000016528	Exosc1	100	96.923	ENSSSCG00000010518	EXOSC1	91	96.923	Sus_scrofa
ENSDORG00000016528	Exosc1	98	81.771	ENSTGUG00000009692	EXOSC1	99	81.771	Taeniopygia_guttata
ENSDORG00000016528	Exosc1	97	73.545	ENSTRUG00000007706	exosc1	98	73.545	Takifugu_rubripes
ENSDORG00000016528	Exosc1	97	73.438	ENSTNIG00000014079	exosc1	97	73.438	Tetraodon_nigroviridis
ENSDORG00000016528	Exosc1	100	89.744	ENSTBEG00000006011	EXOSC1	100	89.744	Tupaia_belangeri
ENSDORG00000016528	Exosc1	94	97.283	ENSTTRG00000009887	EXOSC1	100	97.283	Tursiops_truncatus
ENSDORG00000016528	Exosc1	100	83.240	ENSUAMG00000010266	EXOSC1	100	83.240	Ursus_americanus
ENSDORG00000016528	Exosc1	100	83.240	ENSUMAG00000022002	EXOSC1	100	83.240	Ursus_maritimus
ENSDORG00000016528	Exosc1	100	97.436	ENSVVUG00000023192	EXOSC1	63	97.436	Vulpes_vulpes
ENSDORG00000016528	Exosc1	98	78.125	ENSXETG00000003434	exosc1	99	78.125	Xenopus_tropicalis
ENSDORG00000016528	Exosc1	62	85.000	ENSXCOG00000014499	exosc1	92	85.000	Xiphophorus_couchianus
ENSDORG00000016528	Exosc1	98	66.146	ENSXMAG00000023382	exosc1	93	66.146	Xiphophorus_maculatus