EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDORG00000016534 (Gene tree)
Gene ID: 105987116
Gene Symbol: Fubp1
Alias: -
Full Name: far upstream element binding protein 1
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Minus strand
Length: 31253 bases
Position: chrKN672385.1:339506-370758
Accession: 105987116
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000015558	KH_1	PF00013.29	1.3e-69	1	4
ENSDORP00000015558	KH_1	PF00013.29	1.3e-69	2	4
ENSDORP00000015558	KH_1	PF00013.29	1.3e-69	3	4
ENSDORP00000015558	KH_1	PF00013.29	1.3e-69	4	4
ENSDORP00000026158	KH_1	PF00013.29	1.4e-69	1	4
ENSDORP00000026158	KH_1	PF00013.29	1.4e-69	2	4
ENSDORP00000026158	KH_1	PF00013.29	1.4e-69	3	4
ENSDORP00000026158	KH_1	PF00013.29	1.4e-69	4	4
ENSDORP00000015558	KH_2	PF07650.17	1.4e-22	1	2
ENSDORP00000015558	KH_2	PF07650.17	1.4e-22	2	2
ENSDORP00000026158	KH_2	PF07650.17	1.5e-22	1	2
ENSDORP00000026158	KH_2	PF07650.17	1.5e-22	2	2
ENSDORP00000026158	DUF1897	PF09005.10	6.9e-12	1	2
ENSDORP00000026158	DUF1897	PF09005.10	6.9e-12	2	2
ENSDORP00000015558	DUF1897	PF09005.10	1e-11	1	2
ENSDORP00000015558	DUF1897	PF09005.10	1e-11	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000034644	-	6825	XM_013018275	ENSDORP00000026158	655 (aa)	XP_012873729	A0A1S3FB18
ENSDORT00000016535	-	1923	-	ENSDORP00000015558	640 (aa)	-	UPI000BAD020E

Gene Model

Click here to download ENSDORG00000016534's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000016534's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDORG00000016534	Fubp1	56	36.364	ENSDORG00000012633	Nova1	56	36.364
ENSDORG00000016534	Fubp1	56	34.524	ENSDORG00000000573	Pcbp4	74	34.524
ENSDORG00000016534	Fubp1	59	30.769	ENSDORG00000026568	Nova2	91	36.765
ENSDORG00000016534	Fubp1	57	31.959	ENSDORG00000029549	-	90	31.959
ENSDORG00000016534	Fubp1	90	55.520	ENSDORG00000002447	Khsrp	63	66.837

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000016534	Fubp1	100	99.389	ENSG00000162613	FUBP1	100	99.389	Homo_sapiens
ENSDORG00000016534	Fubp1	100	69.231	ENSAPOG00000014845	fubp1	70	75.546	Acanthochromis_polyacanthus
ENSDORG00000016534	Fubp1	98	96.096	ENSAMEG00000007372	FUBP1	99	96.096	Ailuropoda_melanoleuca
ENSDORG00000016534	Fubp1	98	70.140	ENSACIG00000020024	fubp1	69	74.330	Amphilophus_citrinellus
ENSDORG00000016534	Fubp1	98	67.951	ENSAPEG00000012232	fubp1	72	78.634	Amphiprion_percula
ENSDORG00000016534	Fubp1	99	71.385	ENSATEG00000018619	fubp1	70	78.194	Anabas_testudineus
ENSDORG00000016534	Fubp1	92	97.347	ENSAPLG00000005965	FUBP1	100	97.347	Anas_platyrhynchos
ENSDORG00000016534	Fubp1	98	86.152	ENSACAG00000006310	FUBP1	96	87.427	Anolis_carolinensis
ENSDORG00000016534	Fubp1	98	71.319	ENSACLG00000006708	fubp1	72	79.195	Astatotilapia_calliptera
ENSDORG00000016534	Fubp1	87	77.799	ENSAMXG00000005525	fubp1	64	86.337	Astyanax_mexicanus
ENSDORG00000016534	Fubp1	100	99.237	ENSCJAG00000007062	FUBP1	100	99.237	Callithrix_jacchus
ENSDORG00000016534	Fubp1	98	99.533	ENSCAFG00000020361	FUBP1	99	99.533	Canis_familiaris
ENSDORG00000016534	Fubp1	94	98.862	ENSTSYG00000000148	FUBP1	100	98.862	Carlito_syrichta
ENSDORG00000016534	Fubp1	57	98.168	ENSCAPG00000011052	-	67	98.168	Cavia_aperea
ENSDORG00000016534	Fubp1	100	98.632	ENSCPOG00000002757	FUBP1	100	98.632	Cavia_porcellus
ENSDORG00000016534	Fubp1	100	84.393	ENSCCAG00000036537	FUBP1	100	84.682	Cebus_capucinus
ENSDORG00000016534	Fubp1	100	99.237	ENSCATG00000042126	FUBP1	100	99.237	Cercocebus_atys
ENSDORG00000016534	Fubp1	100	99.084	ENSCLAG00000005621	FUBP1	100	99.359	Chinchilla_lanigera
ENSDORG00000016534	Fubp1	98	99.378	ENSCSAG00000001402	FUBP1	99	99.378	Chlorocebus_sabaeus
ENSDORG00000016534	Fubp1	100	99.237	ENSCHOG00000008177	FUBP1	100	99.237	Choloepus_hoffmanni
ENSDORG00000016534	Fubp1	100	97.872	ENSCGRG00001007103	Fubp1	100	97.872	Cricetulus_griseus_chok1gshd
ENSDORG00000016534	Fubp1	94	98.544	ENSCGRG00000003372	Fubp1	100	98.544	Cricetulus_griseus_crigri
ENSDORG00000016534	Fubp1	98	70.769	ENSCSEG00000021412	fubp1	70	76.316	Cynoglossus_semilaevis
ENSDORG00000016534	Fubp1	98	69.083	ENSCVAG00000014487	fubp1	60	84.986	Cyprinodon_variegatus
ENSDORG00000016534	Fubp1	98	69.865	ENSDARG00000029248	fubp1	70	76.989	Danio_rerio
ENSDORG00000016534	Fubp1	84	73.077	ENSDNOG00000034565	-	83	74.699	Dasypus_novemcinctus
ENSDORG00000016534	Fubp1	77	97.695	ENSETEG00000000948	-	62	97.695	Echinops_telfairi
ENSDORG00000016534	Fubp1	81	46.237	ENSEBUG00000016143	fubp1	64	65.152	Eptatretus_burgeri
ENSDORG00000016534	Fubp1	98	97.619	ENSEEUG00000001287	FUBP1	89	97.619	Erinaceus_europaeus
ENSDORG00000016534	Fubp1	98	70.909	ENSELUG00000007990	fubp1	70	74.514	Esox_lucius
ENSDORG00000016534	Fubp1	69	96.476	ENSFALG00000005768	FUBP1	97	91.745	Ficedula_albicollis
ENSDORG00000016534	Fubp1	100	98.779	ENSFDAG00000014210	FUBP1	100	99.315	Fukomys_damarensis
ENSDORG00000016534	Fubp1	98	71.341	ENSFHEG00000005230	fubp1	70	78.384	Fundulus_heteroclitus
ENSDORG00000016534	Fubp1	98	66.462	ENSGMOG00000003370	fubp1	70	70.510	Gadus_morhua
ENSDORG00000016534	Fubp1	98	96.589	ENSGALG00000008939	FUBP1	99	96.589	Gallus_gallus
ENSDORG00000016534	Fubp1	98	70.015	ENSGAFG00000020972	fubp1	91	76.871	Gambusia_affinis
ENSDORG00000016534	Fubp1	98	70.138	ENSGACG00000016563	fubp1	70	76.316	Gasterosteus_aculeatus
ENSDORG00000016534	Fubp1	98	70.178	ENSHBUG00000009835	fubp1	85	77.333	Haplochromis_burtoni
ENSDORG00000016534	Fubp1	100	98.480	ENSHGLG00000008415	-	100	99.359	Heterocephalus_glaber_female
ENSDORG00000016534	Fubp1	99	86.834	ENSHGLG00000002808	-	72	91.228	Heterocephalus_glaber_female
ENSDORG00000016534	Fubp1	99	87.461	ENSHGLG00100001414	-	72	91.886	Heterocephalus_glaber_male
ENSDORG00000016534	Fubp1	100	98.480	ENSHGLG00100003417	-	100	98.480	Heterocephalus_glaber_male
ENSDORG00000016534	Fubp1	98	68.358	ENSHCOG00000000910	fubp1	70	74.735	Hippocampus_comes
ENSDORG00000016534	Fubp1	98	74.277	ENSIPUG00000009896	fubp1	70	78.097	Ictalurus_punctatus
ENSDORG00000016534	Fubp1	100	99.088	ENSSTOG00000014312	FUBP1	100	99.088	Ictidomys_tridecemlineatus
ENSDORG00000016534	Fubp1	100	96.031	ENSJJAG00000020069	Fubp1	100	99.315	Jaculus_jaculus
ENSDORG00000016534	Fubp1	98	70.507	ENSKMAG00000018897	fubp1	69	76.600	Kryptolebias_marmoratus
ENSDORG00000016534	Fubp1	98	67.166	ENSLBEG00000012700	fubp1	72	75.000	Labrus_bergylta
ENSDORG00000016534	Fubp1	96	71.492	ENSLOCG00000003745	fubp1	92	74.180	Lepisosteus_oculatus
ENSDORG00000016534	Fubp1	100	95.858	ENSLAFG00000003273	FUBP1	99	97.834	Loxodonta_africana
ENSDORG00000016534	Fubp1	100	99.237	ENSMFAG00000031825	FUBP1	100	99.237	Macaca_fascicularis
ENSDORG00000016534	Fubp1	100	99.237	ENSMMUG00000002899	FUBP1	100	99.237	Macaca_mulatta
ENSDORG00000016534	Fubp1	100	99.237	ENSMNEG00000045212	FUBP1	100	99.237	Macaca_nemestrina
ENSDORG00000016534	Fubp1	98	71.385	ENSMZEG00005024298	fubp1	70	78.384	Maylandia_zebra
ENSDORG00000016534	Fubp1	92	96.860	ENSMGAG00000009424	FUBP1	99	96.860	Meleagris_gallopavo
ENSDORG00000016534	Fubp1	100	98.784	ENSMAUG00000016428	Fubp1	100	98.784	Mesocricetus_auratus
ENSDORG00000016534	Fubp1	100	98.328	ENSMOCG00000014751	Fubp1	100	98.328	Microtus_ochrogaster
ENSDORG00000016534	Fubp1	87	74.000	ENSMMOG00000019463	fubp1	64	82.817	Mola_mola
ENSDORG00000016534	Fubp1	94	90.881	ENSMODG00000020804	FUBP1	100	90.881	Monodelphis_domestica
ENSDORG00000016534	Fubp1	98	70.642	ENSMALG00000015173	fubp1	70	76.856	Monopterus_albus
ENSDORG00000016534	Fubp1	100	98.015	MGP_CAROLIEiJ_G0025740	Fubp1	100	98.015	Mus_caroli
ENSDORG00000016534	Fubp1	100	97.710	ENSMUSG00000028034	Fubp1	100	97.710	Mus_musculus
ENSDORG00000016534	Fubp1	100	98.473	MGP_PahariEiJ_G0027191	Fubp1	100	98.473	Mus_pahari
ENSDORG00000016534	Fubp1	100	97.863	MGP_SPRETEiJ_G0026693	Fubp1	100	97.987	Mus_spretus
ENSDORG00000016534	Fubp1	98	95.217	ENSMLUG00000014802	FUBP1	99	95.217	Myotis_lucifugus
ENSDORG00000016534	Fubp1	100	94.529	ENSNGAG00000014302	Fubp1	100	97.987	Nannospalax_galili
ENSDORG00000016534	Fubp1	98	69.302	ENSNBRG00000015099	fubp1	72	79.195	Neolamprologus_brichardi
ENSDORG00000016534	Fubp1	100	95.586	ENSNLEG00000009772	FUBP1	100	95.586	Nomascus_leucogenys
ENSDORG00000016534	Fubp1	91	100.000	ENSMEUG00000007917	-	79	100.000	Notamacropus_eugenii
ENSDORG00000016534	Fubp1	91	98.630	ENSOPRG00000001175	FUBP1	91	98.630	Ochotona_princeps
ENSDORG00000016534	Fubp1	98	66.822	ENSODEG00000003657	-	99	66.044	Octodon_degus
ENSDORG00000016534	Fubp1	100	98.931	ENSODEG00000002600	-	100	99.315	Octodon_degus
ENSDORG00000016534	Fubp1	98	70.134	ENSONIG00000018381	fubp1	69	78.384	Oreochromis_niloticus
ENSDORG00000016534	Fubp1	87	92.562	ENSOANG00000009777	FUBP1	99	92.397	Ornithorhynchus_anatinus
ENSDORG00000016534	Fubp1	98	68.896	ENSORLG00000003540	fubp1	71	78.444	Oryzias_latipes
ENSDORG00000016534	Fubp1	98	68.981	ENSORLG00020005908	fubp1	70	78.300	Oryzias_latipes_hni
ENSDORG00000016534	Fubp1	98	70.607	ENSORLG00015008779	fubp1	70	78.300	Oryzias_latipes_hsok
ENSDORG00000016534	Fubp1	98	70.497	ENSOMEG00000021943	fubp1	70	76.432	Oryzias_melastigma
ENSDORG00000016534	Fubp1	98	95.522	ENSOGAG00000014233	FUBP1	99	95.522	Otolemur_garnettii
ENSDORG00000016534	Fubp1	98	96.531	ENSOARG00000013259	FUBP1	99	96.380	Ovis_aries
ENSDORG00000016534	Fubp1	100	99.542	ENSPPRG00000000413	FUBP1	100	99.542	Panthera_pardus
ENSDORG00000016534	Fubp1	100	99.542	ENSPTIG00000019450	FUBP1	100	99.542	Panthera_tigris_altaica
ENSDORG00000016534	Fubp1	93	95.908	ENSPSIG00000012965	FUBP1	99	96.622	Pelodiscus_sinensis
ENSDORG00000016534	Fubp1	98	71.451	ENSPMGG00000009060	fubp1	71	77.925	Periophthalmus_magnuspinnatus
ENSDORG00000016534	Fubp1	100	97.568	ENSPEMG00000021802	Fubp1	100	98.630	Peromyscus_maniculatus_bairdii
ENSDORG00000016534	Fubp1	57	61.966	ENSPMAG00000001644	-	90	63.063	Petromyzon_marinus
ENSDORG00000016534	Fubp1	98	68.000	ENSPLAG00000021170	fubp1	72	78.384	Poecilia_latipinna
ENSDORG00000016534	Fubp1	98	72.713	ENSPMEG00000004747	fubp1	73	78.384	Poecilia_mexicana
ENSDORG00000016534	Fubp1	98	71.450	ENSPREG00000017911	fubp1	70	78.384	Poecilia_reticulata
ENSDORG00000016534	Fubp1	76	99.351	ENSPPYG00000001219	-	70	99.351	Pongo_abelii
ENSDORG00000016534	Fubp1	100	98.626	ENSPCAG00000012617	FUBP1	100	98.626	Procavia_capensis
ENSDORG00000016534	Fubp1	100	99.542	ENSPCOG00000024974	FUBP1	100	99.542	Propithecus_coquereli
ENSDORG00000016534	Fubp1	100	95.115	ENSPVAG00000014637	FUBP1	100	95.115	Pteropus_vampyrus
ENSDORG00000016534	Fubp1	98	71.363	ENSPNYG00000004552	fubp1	73	79.111	Pundamilia_nyererei
ENSDORG00000016534	Fubp1	98	72.404	ENSPNAG00000016207	fubp1	87	77.440	Pygocentrus_nattereri
ENSDORG00000016534	Fubp1	98	97.833	ENSRNOG00000043370	Fubp1	99	97.833	Rattus_norvegicus
ENSDORG00000016534	Fubp1	98	99.378	ENSRBIG00000042950	FUBP1	99	99.378	Rhinopithecus_bieti
ENSDORG00000016534	Fubp1	98	99.378	ENSRROG00000043534	FUBP1	99	99.378	Rhinopithecus_roxellana
ENSDORG00000016534	Fubp1	100	99.237	ENSSBOG00000027299	FUBP1	100	99.237	Saimiri_boliviensis_boliviensis
ENSDORG00000016534	Fubp1	94	97.738	ENSSHAG00000005367	FUBP1	100	97.738	Sarcophilus_harrisii
ENSDORG00000016534	Fubp1	97	74.375	ENSSFOG00015010213	fubp1	70	79.386	Scleropages_formosus
ENSDORG00000016534	Fubp1	98	69.925	ENSSDUG00000007383	fubp1	68	76.333	Seriola_dumerili
ENSDORG00000016534	Fubp1	98	69.970	ENSSLDG00000022863	fubp1	73	76.190	Seriola_lalandi_dorsalis
ENSDORG00000016534	Fubp1	100	97.133	ENSSARG00000011730	FUBP1	74	96.899	Sorex_araneus
ENSDORG00000016534	Fubp1	98	88.253	ENSSPUG00000008389	FUBP1	99	86.091	Sphenodon_punctatus
ENSDORG00000016534	Fubp1	98	72.291	ENSSPAG00000010161	fubp1	69	78.971	Stegastes_partitus
ENSDORG00000016534	Fubp1	92	96.223	ENSTGUG00000006841	FUBP1	100	96.223	Taeniopygia_guttata
ENSDORG00000016534	Fubp1	91	72.305	ENSTRUG00000004615	fubp1	85	77.827	Takifugu_rubripes
ENSDORG00000016534	Fubp1	55	78.750	ENSTNIG00000019815	-	88	84.459	Tetraodon_nigroviridis
ENSDORG00000016534	Fubp1	83	100.000	ENSTBEG00000017333	FUBP1	67	100.000	Tupaia_belangeri
ENSDORG00000016534	Fubp1	100	99.695	ENSTTRG00000000096	FUBP1	100	99.695	Tursiops_truncatus
ENSDORG00000016534	Fubp1	99	99.692	ENSVPAG00000004709	FUBP1	100	99.692	Vicugna_pacos
ENSDORG00000016534	Fubp1	98	68.615	ENSXCOG00000019354	fubp1	72	77.483	Xiphophorus_couchianus
ENSDORG00000016534	Fubp1	95	71.835	ENSXMAG00000007168	fubp1	73	78.166	Xiphophorus_maculatus