EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDORG00000016683 (Gene tree)
Gene ID: 105996351
Gene Symbol: Lsm14b
Alias: -
Full Name: LSM family member 14B
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Plus strand
Length: 10289 bases
Position: chrKN672475.1:908513-918801
Accession: 105996351
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000021026	FDF	PF09532.10	8.4e-25	1	1
ENSDORP00000015693	FDF	PF09532.10	1.4e-24	1	1
ENSDORP00000015693	LSM14	PF12701.7	5.2e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000016683	-	1185	-	ENSDORP00000015693	394 (aa)	-	UPI000BAD0255
ENSDORT00000027042	-	918	XM_013030402	ENSDORP00000021026	305 (aa)	XP_012885856	A0A1S3GAK5

Gene Model

Click here to download ENSDORG00000016683's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000016683's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDORG00000016683	Lsm14b	89	38.361	ENSDORG00000016326	Lsm14a	69	38.413

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000016683	Lsm14b	88	91.884	ENSG00000149657	LSM14B	100	89.113	Homo_sapiens
ENSDORG00000016683	Lsm14b	78	53.292	ENSAPOG00000001780	lsm14b	81	53.704	Acanthochromis_polyacanthus
ENSDORG00000016683	Lsm14b	100	89.836	ENSAMEG00000013430	LSM14B	92	80.513	Ailuropoda_melanoleuca
ENSDORG00000016683	Lsm14b	78	48.882	ENSACIG00000012266	lsm14b	81	48.607	Amphilophus_citrinellus
ENSDORG00000016683	Lsm14b	60	42.500	ENSACIG00000003147	LSM14B	88	42.194	Amphilophus_citrinellus
ENSDORG00000016683	Lsm14b	100	39.117	ENSAOCG00000006667	LSM14B	82	47.385	Amphiprion_ocellaris
ENSDORG00000016683	Lsm14b	78	54.037	ENSAOCG00000012380	lsm14b	81	54.434	Amphiprion_ocellaris
ENSDORG00000016683	Lsm14b	88	35.034	ENSAPEG00000023633	lsm14b	80	48.726	Amphiprion_percula
ENSDORG00000016683	Lsm14b	97	40.803	ENSATEG00000015895	LSM14B	89	41.837	Anabas_testudineus
ENSDORG00000016683	Lsm14b	78	50.158	ENSATEG00000016603	lsm14b	81	50.621	Anabas_testudineus
ENSDORG00000016683	Lsm14b	100	80.782	ENSAPLG00000013203	LSM14B	99	74.227	Anas_platyrhynchos
ENSDORG00000016683	Lsm14b	88	79.023	ENSACAG00000016195	LSM14B	90	79.023	Anolis_carolinensis
ENSDORG00000016683	Lsm14b	100	89.180	ENSANAG00000037915	LSM14B	90	91.014	Aotus_nancymaae
ENSDORG00000016683	Lsm14b	78	47.077	ENSACLG00000019663	lsm14b	81	50.152	Astatotilapia_calliptera
ENSDORG00000016683	Lsm14b	100	46.809	ENSAMXG00000002865	lsm14b	90	57.459	Astyanax_mexicanus
ENSDORG00000016683	Lsm14b	100	86.230	ENSBTAG00000021558	LSM14B	91	78.385	Bos_taurus
ENSDORG00000016683	Lsm14b	100	91.148	ENSCJAG00000014434	LSM14B	90	92.754	Callithrix_jacchus
ENSDORG00000016683	Lsm14b	100	88.852	ENSCAFG00000012518	LSM14B	98	80.890	Canis_familiaris
ENSDORG00000016683	Lsm14b	100	88.852	ENSCAFG00020022150	LSM14B	90	89.855	Canis_lupus_dingo
ENSDORG00000016683	Lsm14b	90	64.982	ENSCHIG00000022681	-	90	66.087	Capra_hircus
ENSDORG00000016683	Lsm14b	100	87.541	ENSCHIG00000010284	-	90	88.406	Capra_hircus
ENSDORG00000016683	Lsm14b	87	92.690	ENSTSYG00000031914	LSM14B	89	92.690	Carlito_syrichta
ENSDORG00000016683	Lsm14b	100	90.492	ENSCAPG00000013059	LSM14B	100	91.545	Cavia_aperea
ENSDORG00000016683	Lsm14b	100	90.820	ENSCPOG00000038080	LSM14B	100	92.105	Cavia_porcellus
ENSDORG00000016683	Lsm14b	94	80.070	ENSCCAG00000024900	-	99	75.896	Cebus_capucinus
ENSDORG00000016683	Lsm14b	88	91.594	ENSCCAG00000021267	LSM14B	90	91.594	Cebus_capucinus
ENSDORG00000016683	Lsm14b	100	89.836	ENSCATG00000036006	LSM14B	90	91.594	Cercocebus_atys
ENSDORG00000016683	Lsm14b	100	91.475	ENSCLAG00000003186	LSM14B	100	92.690	Chinchilla_lanigera
ENSDORG00000016683	Lsm14b	100	90.164	ENSCSAG00000015729	LSM14B	91	82.552	Chlorocebus_sabaeus
ENSDORG00000016683	Lsm14b	50	81.818	ENSCHOG00000006997	-	100	63.399	Choloepus_hoffmanni
ENSDORG00000016683	Lsm14b	100	81.759	ENSCPBG00000027065	LSM14B	91	75.389	Chrysemys_picta_bellii
ENSDORG00000016683	Lsm14b	87	92.398	ENSCANG00000036986	LSM14B	100	92.398	Colobus_angolensis_palliatus
ENSDORG00000016683	Lsm14b	100	92.131	ENSCGRG00001018399	Lsm14b	100	92.131	Cricetulus_griseus_chok1gshd
ENSDORG00000016683	Lsm14b	98	91.946	ENSCGRG00000006111	-	100	91.946	Cricetulus_griseus_crigri
ENSDORG00000016683	Lsm14b	80	82.716	ENSCGRG00000002484	-	100	81.893	Cricetulus_griseus_crigri
ENSDORG00000016683	Lsm14b	95	37.255	ENSCSEG00000020669	LSM14B	82	44.277	Cynoglossus_semilaevis
ENSDORG00000016683	Lsm14b	78	48.765	ENSCSEG00000004722	lsm14b	82	49.390	Cynoglossus_semilaevis
ENSDORG00000016683	Lsm14b	95	32.313	ENSCVAG00000012433	-	88	36.820	Cyprinodon_variegatus
ENSDORG00000016683	Lsm14b	100	38.835	ENSDARG00000025386	lsm14b	90	50.142	Danio_rerio
ENSDORG00000016683	Lsm14b	100	87.213	ENSDNOG00000025246	LSM14B	100	87.213	Dasypus_novemcinctus
ENSDORG00000016683	Lsm14b	99	61.386	ENSETEG00000001869	-	89	71.512	Echinops_telfairi
ENSDORG00000016683	Lsm14b	81	69.355	ENSETEG00000011188	-	100	83.117	Echinops_telfairi
ENSDORG00000016683	Lsm14b	100	89.180	ENSEASG00005023218	LSM14B	100	89.180	Equus_asinus_asinus
ENSDORG00000016683	Lsm14b	100	89.508	ENSECAG00000010659	LSM14B	90	90.435	Equus_caballus
ENSDORG00000016683	Lsm14b	72	73.333	ENSEEUG00000007331	LSM14B	100	73.333	Erinaceus_europaeus
ENSDORG00000016683	Lsm14b	79	48.457	ENSELUG00000016299	LSM14B	92	49.584	Esox_lucius
ENSDORG00000016683	Lsm14b	86	55.301	ENSELUG00000005780	lsm14b	82	56.698	Esox_lucius
ENSDORG00000016683	Lsm14b	88	90.145	ENSFCAG00000003248	LSM14B	90	90.145	Felis_catus
ENSDORG00000016683	Lsm14b	100	82.792	ENSFALG00000010618	LSM14B	100	75.969	Ficedula_albicollis
ENSDORG00000016683	Lsm14b	100	91.475	ENSFDAG00000002214	LSM14B	100	92.690	Fukomys_damarensis
ENSDORG00000016683	Lsm14b	63	39.781	ENSFHEG00000003362	LSM14B	66	43.130	Fundulus_heteroclitus
ENSDORG00000016683	Lsm14b	100	37.778	ENSFHEG00000006237	lsm14b	81	47.147	Fundulus_heteroclitus
ENSDORG00000016683	Lsm14b	100	39.869	ENSGMOG00000017115	lsm14b	88	47.851	Gadus_morhua
ENSDORG00000016683	Lsm14b	100	79.100	ENSGALG00000005125	LSM14B	90	83.191	Gallus_gallus
ENSDORG00000016683	Lsm14b	96	36.054	ENSGAFG00000013723	LSM14B	87	40.598	Gambusia_affinis
ENSDORG00000016683	Lsm14b	88	44.413	ENSGAFG00000020318	lsm14b	81	43.558	Gambusia_affinis
ENSDORG00000016683	Lsm14b	79	50.000	ENSGACG00000009973	lsm14b	82	50.000	Gasterosteus_aculeatus
ENSDORG00000016683	Lsm14b	93	70.070	ENSGAGG00000004106	LSM14B	94	80.816	Gopherus_agassizii
ENSDORG00000016683	Lsm14b	100	90.164	ENSGGOG00000005630	LSM14B	100	90.164	Gorilla_gorilla
ENSDORG00000016683	Lsm14b	100	92.131	ENSHGLG00000015055	LSM14B	100	92.131	Heterocephalus_glaber_female
ENSDORG00000016683	Lsm14b	99	92.384	ENSHGLG00100015273	LSM14B	100	92.384	Heterocephalus_glaber_male
ENSDORG00000016683	Lsm14b	88	39.405	ENSHCOG00000004867	lsm14b	86	44.255	Hippocampus_comes
ENSDORG00000016683	Lsm14b	95	38.411	ENSHCOG00000018747	LSM14B	82	49.387	Hippocampus_comes
ENSDORG00000016683	Lsm14b	88	56.857	ENSIPUG00000014946	lsm14b	85	56.857	Ictalurus_punctatus
ENSDORG00000016683	Lsm14b	100	92.787	ENSSTOG00000020482	LSM14B	100	93.860	Ictidomys_tridecemlineatus
ENSDORG00000016683	Lsm14b	100	91.803	ENSJJAG00000012728	Lsm14b	100	91.803	Jaculus_jaculus
ENSDORG00000016683	Lsm14b	65	45.024	ENSKMAG00000012834	-	88	45.238	Kryptolebias_marmoratus
ENSDORG00000016683	Lsm14b	79	49.074	ENSKMAG00000017524	lsm14b	83	49.544	Kryptolebias_marmoratus
ENSDORG00000016683	Lsm14b	68	39.474	ENSLBEG00000007951	LSM14B	86	41.880	Labrus_bergylta
ENSDORG00000016683	Lsm14b	100	66.774	ENSLACG00000003849	LSM14B	91	65.039	Latimeria_chalumnae
ENSDORG00000016683	Lsm14b	100	47.588	ENSLOCG00000003746	lsm14b	96	59.714	Lepisosteus_oculatus
ENSDORG00000016683	Lsm14b	87	88.338	ENSLAFG00000007492	LSM14B	99	88.338	Loxodonta_africana
ENSDORG00000016683	Lsm14b	100	90.492	ENSMFAG00000041479	LSM14B	90	92.174	Macaca_fascicularis
ENSDORG00000016683	Lsm14b	88	92.174	ENSMMUG00000014084	LSM14B	90	92.174	Macaca_mulatta
ENSDORG00000016683	Lsm14b	88	92.174	ENSMNEG00000045573	LSM14B	90	92.174	Macaca_nemestrina
ENSDORG00000016683	Lsm14b	87	92.105	ENSMLEG00000040895	LSM14B	100	92.105	Mandrillus_leucophaeus
ENSDORG00000016683	Lsm14b	78	51.553	ENSMAMG00000020539	lsm14b	82	51.543	Mastacembelus_armatus
ENSDORG00000016683	Lsm14b	100	38.462	ENSMAMG00000024124	LSM14B	82	48.598	Mastacembelus_armatus
ENSDORG00000016683	Lsm14b	78	46.769	ENSMZEG00005000987	lsm14b	81	49.848	Maylandia_zebra
ENSDORG00000016683	Lsm14b	90	37.294	ENSMZEG00005026001	LSM14B	85	47.181	Maylandia_zebra
ENSDORG00000016683	Lsm14b	88	80.114	ENSMGAG00000005300	LSM14B	99	81.250	Meleagris_gallopavo
ENSDORG00000016683	Lsm14b	100	91.475	ENSMAUG00000020700	Lsm14b	100	91.475	Mesocricetus_auratus
ENSDORG00000016683	Lsm14b	100	90.820	ENSMICG00000014675	LSM14B	90	92.754	Microcebus_murinus
ENSDORG00000016683	Lsm14b	90	77.818	ENSMOCG00000005119	-	93	77.656	Microtus_ochrogaster
ENSDORG00000016683	Lsm14b	100	91.148	ENSMOCG00000020600	Lsm14b	100	91.148	Microtus_ochrogaster
ENSDORG00000016683	Lsm14b	90	39.286	ENSMMOG00000017321	LSM14B	82	47.401	Mola_mola
ENSDORG00000016683	Lsm14b	78	48.896	ENSMMOG00000020042	lsm14b	84	48.447	Mola_mola
ENSDORG00000016683	Lsm14b	100	85.902	ENSMODG00000016690	LSM14B	100	85.902	Monodelphis_domestica
ENSDORG00000016683	Lsm14b	94	39.446	ENSMALG00000004783	lsm14b	81	49.524	Monopterus_albus
ENSDORG00000016683	Lsm14b	80	46.567	ENSMALG00000022251	LSM14B	82	45.706	Monopterus_albus
ENSDORG00000016683	Lsm14b	100	90.820	MGP_CAROLIEiJ_G0024770	Lsm14b	90	91.884	Mus_caroli
ENSDORG00000016683	Lsm14b	100	91.148	ENSMUSG00000039108	Lsm14b	100	91.148	Mus_musculus
ENSDORG00000016683	Lsm14b	100	91.148	MGP_PahariEiJ_G0026214	Lsm14b	90	92.174	Mus_pahari
ENSDORG00000016683	Lsm14b	100	91.148	MGP_SPRETEiJ_G0025693	Lsm14b	90	92.174	Mus_spretus
ENSDORG00000016683	Lsm14b	100	88.197	ENSMPUG00000007584	LSM14B	95	79.843	Mustela_putorius_furo
ENSDORG00000016683	Lsm14b	100	76.797	ENSMLUG00000000304	LSM14B	90	88.728	Myotis_lucifugus
ENSDORG00000016683	Lsm14b	75	89.177	ENSNGAG00000016550	Lsm14b	100	89.177	Nannospalax_galili
ENSDORG00000016683	Lsm14b	87	92.690	ENSNLEG00000015757	LSM14B	100	92.690	Nomascus_leucogenys
ENSDORG00000016683	Lsm14b	65	93.137	ENSMEUG00000008267	-	66	93.137	Notamacropus_eugenii
ENSDORG00000016683	Lsm14b	53	55.072	ENSMEUG00000006305	-	82	56.398	Notamacropus_eugenii
ENSDORG00000016683	Lsm14b	50	73.203	ENSOPRG00000000447	-	59	95.000	Ochotona_princeps
ENSDORG00000016683	Lsm14b	100	92.787	ENSODEG00000004099	LSM14B	100	92.787	Octodon_degus
ENSDORG00000016683	Lsm14b	78	51.692	ENSONIG00000020318	lsm14b	82	51.940	Oreochromis_niloticus
ENSDORG00000016683	Lsm14b	60	81.092	ENSOANG00000003370	LSM14B	86	80.377	Ornithorhynchus_anatinus
ENSDORG00000016683	Lsm14b	87	88.338	ENSOCUG00000006279	LSM14B	99	88.338	Oryctolagus_cuniculus
ENSDORG00000016683	Lsm14b	78	46.708	ENSORLG00000013525	lsm14b	81	49.074	Oryzias_latipes
ENSDORG00000016683	Lsm14b	91	35.517	ENSORLG00000028353	LSM14B	81	42.154	Oryzias_latipes
ENSDORG00000016683	Lsm14b	78	47.022	ENSORLG00020020553	lsm14b	81	49.383	Oryzias_latipes_hni
ENSDORG00000016683	Lsm14b	91	34.173	ENSORLG00020018191	-	85	35.686	Oryzias_latipes_hni
ENSDORG00000016683	Lsm14b	78	47.022	ENSORLG00015016862	lsm14b	81	49.383	Oryzias_latipes_hsok
ENSDORG00000016683	Lsm14b	91	35.294	ENSORLG00015013157	LSM14B	81	42.284	Oryzias_latipes_hsok
ENSDORG00000016683	Lsm14b	78	46.273	ENSOMEG00000023917	lsm14b	81	48.930	Oryzias_melastigma
ENSDORG00000016683	Lsm14b	63	39.271	ENSOMEG00000000171	-	97	39.535	Oryzias_melastigma
ENSDORG00000016683	Lsm14b	100	90.492	ENSOGAG00000003915	LSM14B	91	82.552	Otolemur_garnettii
ENSDORG00000016683	Lsm14b	100	87.213	ENSOARG00000014706	LSM14B	98	79.112	Ovis_aries
ENSDORG00000016683	Lsm14b	87	92.420	ENSPPAG00000035799	LSM14B	94	92.420	Pan_paniscus
ENSDORG00000016683	Lsm14b	88	89.855	ENSPPRG00000009197	LSM14B	90	89.855	Panthera_pardus
ENSDORG00000016683	Lsm14b	97	88.475	ENSPTIG00000021518	LSM14B	99	88.475	Panthera_tigris_altaica
ENSDORG00000016683	Lsm14b	88	91.884	ENSPTRG00000013696	LSM14B	90	91.884	Pan_troglodytes
ENSDORG00000016683	Lsm14b	88	91.884	ENSPANG00000011747	LSM14B	90	91.884	Papio_anubis
ENSDORG00000016683	Lsm14b	100	45.574	ENSPKIG00000003275	lsm14b	81	58.280	Paramormyrops_kingsleyae
ENSDORG00000016683	Lsm14b	100	80.456	ENSPSIG00000014762	LSM14B	100	82.997	Pelodiscus_sinensis
ENSDORG00000016683	Lsm14b	100	91.803	ENSPEMG00000017688	Lsm14b	100	91.803	Peromyscus_maniculatus_bairdii
ENSDORG00000016683	Lsm14b	88	87.536	ENSPCIG00000013405	LSM14B	90	87.536	Phascolarctos_cinereus
ENSDORG00000016683	Lsm14b	100	39.490	ENSPFOG00000005631	lsm14b	82	48.000	Poecilia_formosa
ENSDORG00000016683	Lsm14b	100	38.217	ENSPLAG00000002449	lsm14b	81	48.297	Poecilia_latipinna
ENSDORG00000016683	Lsm14b	89	35.714	ENSPLAG00000005793	LSM14B	81	45.370	Poecilia_latipinna
ENSDORG00000016683	Lsm14b	100	38.535	ENSPMEG00000000745	lsm14b	81	47.678	Poecilia_mexicana
ENSDORG00000016683	Lsm14b	89	35.125	ENSPMEG00000022953	LSM14B	81	43.478	Poecilia_mexicana
ENSDORG00000016683	Lsm14b	90	38.406	ENSPREG00000007828	LSM14B	87	40.239	Poecilia_reticulata
ENSDORG00000016683	Lsm14b	100	71.803	ENSPPYG00000011194	LSM14B	90	72.958	Pongo_abelii
ENSDORG00000016683	Lsm14b	88	93.623	ENSPCOG00000013625	LSM14B	90	93.623	Propithecus_coquereli
ENSDORG00000016683	Lsm14b	100	69.935	ENSPVAG00000017918	LSM14B	100	68.339	Pteropus_vampyrus
ENSDORG00000016683	Lsm14b	100	47.452	ENSPNAG00000012777	lsm14b	90	58.028	Pygocentrus_nattereri
ENSDORG00000016683	Lsm14b	100	90.820	ENSRNOG00000054557	Lsm14b	91	82.292	Rattus_norvegicus
ENSDORG00000016683	Lsm14b	100	89.836	ENSRBIG00000033461	LSM14B	99	92.151	Rhinopithecus_bieti
ENSDORG00000016683	Lsm14b	100	90.164	ENSRROG00000042949	LSM14B	100	90.164	Rhinopithecus_roxellana
ENSDORG00000016683	Lsm14b	100	85.670	ENSSBOG00000032820	LSM14B	100	92.398	Saimiri_boliviensis_boliviensis
ENSDORG00000016683	Lsm14b	100	84.918	ENSSHAG00000015528	LSM14B	100	84.918	Sarcophilus_harrisii
ENSDORG00000016683	Lsm14b	88	46.209	ENSSFOG00015004627	lsm14b	82	57.895	Scleropages_formosus
ENSDORG00000016683	Lsm14b	97	42.997	ENSSMAG00000000135	LSM14B	82	51.524	Scophthalmus_maximus
ENSDORG00000016683	Lsm14b	78	48.903	ENSSMAG00000012725	lsm14b	82	49.383	Scophthalmus_maximus
ENSDORG00000016683	Lsm14b	78	50.000	ENSSDUG00000020977	lsm14b	82	50.453	Seriola_dumerili
ENSDORG00000016683	Lsm14b	80	50.610	ENSSDUG00000022770	LSM14B	82	51.077	Seriola_dumerili
ENSDORG00000016683	Lsm14b	90	38.298	ENSSLDG00000011354	-	89	44.706	Seriola_lalandi_dorsalis
ENSDORG00000016683	Lsm14b	67	81.159	ENSSARG00000007749	-	100	81.159	Sorex_araneus
ENSDORG00000016683	Lsm14b	100	79.221	ENSSPUG00000014360	LSM14B	91	73.834	Sphenodon_punctatus
ENSDORG00000016683	Lsm14b	100	38.235	ENSSPAG00000018854	-	88	41.296	Stegastes_partitus
ENSDORG00000016683	Lsm14b	78	51.935	ENSSPAG00000020915	lsm14b	80	50.794	Stegastes_partitus
ENSDORG00000016683	Lsm14b	100	87.213	ENSSSCG00000026052	LSM14B	100	87.213	Sus_scrofa
ENSDORG00000016683	Lsm14b	88	83.908	ENSTGUG00000007884	LSM14B	100	83.908	Taeniopygia_guttata
ENSDORG00000016683	Lsm14b	100	37.461	ENSTRUG00000011354	lsm14b	89	48.626	Takifugu_rubripes
ENSDORG00000016683	Lsm14b	90	37.847	ENSTRUG00000001529	LSM14B	82	46.951	Takifugu_rubripes
ENSDORG00000016683	Lsm14b	79	52.322	ENSTNIG00000002445	lsm14b	82	52.322	Tetraodon_nigroviridis
ENSDORG00000016683	Lsm14b	71	91.503	ENSTTRG00000011043	LSM14B	75	67.340	Tursiops_truncatus
ENSDORG00000016683	Lsm14b	100	89.836	ENSUAMG00000025298	LSM14B	90	90.962	Ursus_americanus
ENSDORG00000016683	Lsm14b	100	89.836	ENSUMAG00000000480	LSM14B	90	90.962	Ursus_maritimus
ENSDORG00000016683	Lsm14b	100	88.525	ENSVVUG00000015920	LSM14B	100	88.525	Vulpes_vulpes
ENSDORG00000016683	Lsm14b	81	66.932	ENSXETG00000001997	lsm14b	88	73.103	Xenopus_tropicalis
ENSDORG00000016683	Lsm14b	78	45.455	ENSXMAG00000010013	lsm14b	81	45.988	Xiphophorus_maculatus