EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDORG00000023276 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: U1 small nuclear ribonucleoprotein C-like
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Plus strand
Length: 793 bases
Position: chrKN672546.1:1613381-1614173
Accession: 105999785
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000018821	zf-U1	PF06220.12	2.3e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000033580	-	525	XM_013034909	ENSDORP00000018821	174 (aa)	XP_012890363	UPI000BAD0304

Gene Model

Click here to download ENSDORG00000023276's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000023276's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDORG00000023276	-	95	61.446	ENSDORG00000029823	-	100	66.867
ENSDORG00000023276	-	57	69.000	ENSDORG00000005955	Snrpc	66	64.535

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000023276	-	100	65.517	ENSCAFG00020024178	-	86	65.517	Canis_lupus_dingo
ENSDORG00000023276	-	90	64.331	ENSCAFG00020001897	-	86	64.331	Canis_lupus_dingo
ENSDORG00000023276	-	84	66.667	ENSTSYG00000032340	-	81	68.707	Carlito_syrichta
ENSDORG00000023276	-	100	59.770	ENSCANG00000036886	-	100	70.690	Colobus_angolensis_palliatus
ENSDORG00000023276	-	66	58.261	ENSCGRG00001021613	-	74	64.493	Cricetulus_griseus_chok1gshd
ENSDORG00000023276	-	66	58.261	ENSCGRG00000012679	-	74	64.493	Cricetulus_griseus_crigri
ENSDORG00000023276	-	97	61.850	ENSETEG00000005056	-	100	61.714	Echinops_telfairi
ENSDORG00000023276	-	80	44.286	ENSFDAG00000009826	-	63	43.478	Fukomys_damarensis
ENSDORG00000023276	-	100	54.598	ENSMOCG00000022679	-	100	54.598	Microtus_ochrogaster
ENSDORG00000023276	-	100	66.667	ENSPEMG00000015862	-	100	68.391	Peromyscus_maniculatus_bairdii
ENSDORG00000023276	-	100	66.092	ENSPCOG00000022107	-	85	68.391	Propithecus_coquereli
ENSDORG00000023276	-	98	61.988	ENSVVUG00000009930	-	87	57.895	Vulpes_vulpes
ENSDORG00000023276	-	100	72.414	ENSVVUG00000010536	-	99	75.581	Vulpes_vulpes