EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDORG00000023443 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: growth factor independent 1 transcriptional repressor
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Minus strand
Length: 17198 bases
Position: chrKN672385.1:11395167-11412364
Accession: 105987076
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000027411	zf-C2H2	PF00096.26	4.3e-25	1	4
ENSDORP00000027411	zf-C2H2	PF00096.26	4.3e-25	2	4
ENSDORP00000027411	zf-C2H2	PF00096.26	4.3e-25	3	4
ENSDORP00000027411	zf-C2H2	PF00096.26	4.3e-25	4	4
ENSDORP00000027411	zf-met	PF12874.7	1e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000029487	-	1993	XM_013018234	ENSDORP00000027411	135 (aa)	XP_012873688	UPI0000ECFA75

Gene Model

Click here to download ENSDORG00000023443's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000023443's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDORG00000023443	-	100	39.535	ENSDORG00000027637	Zfp319	86	39.535
ENSDORG00000023443	-	100	35.632	ENSDORG00000016697	Ovol2	50	35.632
ENSDORG00000023443	-	99	45.570	ENSDORG00000009702	Zfp574	53	43.478
ENSDORG00000023443	-	100	50.000	ENSDORG00000027564	Zfp26	79	50.000
ENSDORG00000023443	-	100	46.212	ENSDORG00000011934	Zfp1	61	46.212
ENSDORG00000023443	-	99	48.276	ENSDORG00000023529	Zfp13	53	47.761
ENSDORG00000023443	-	99	48.148	ENSDORG00000023200	Zfp865	76	48.148
ENSDORG00000023443	-	99	44.030	ENSDORG00000024150	-	63	44.030
ENSDORG00000023443	-	100	48.031	ENSDORG00000026133	-	90	48.031
ENSDORG00000023443	-	100	47.692	ENSDORG00000009396	Zfp354a	78	47.692
ENSDORG00000023443	-	100	37.594	ENSDORG00000029620	Snai2	53	37.594
ENSDORG00000023443	-	100	54.321	ENSDORG00000009870	Zfp768	50	53.488
ENSDORG00000023443	-	100	44.615	ENSDORG00000007739	Prdm5	74	44.615
ENSDORG00000023443	-	100	46.269	ENSDORG00000016625	Zfp661	87	46.269
ENSDORG00000023443	-	99	43.284	ENSDORG00000014484	Zfp334	68	43.284
ENSDORG00000023443	-	100	50.000	ENSDORG00000023595	Zfp35	82	50.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000023443	-	100	100.000	ENSAMEG00000013858	-	92	100.000	Ailuropoda_melanoleuca
ENSDORG00000023443	-	99	72.388	ENSACIG00000002180	-	99	72.388	Amphilophus_citrinellus
ENSDORG00000023443	-	100	100.000	ENSAPLG00000015700	GFI1	50	100.000	Anas_platyrhynchos
ENSDORG00000023443	-	84	82.143	ENSACLG00000001258	-	91	82.143	Astatotilapia_calliptera
ENSDORG00000023443	-	99	93.284	ENSAMXG00000006669	GFI1	54	93.284	Astyanax_mexicanus
ENSDORG00000023443	-	82	82.883	ENSAMXG00000015228	-	51	82.883	Astyanax_mexicanus
ENSDORG00000023443	-	84	100.000	ENSCAPG00000016268	-	100	100.000	Cavia_aperea
ENSDORG00000023443	-	100	99.259	ENSCPBG00000015742	-	100	99.259	Chrysemys_picta_bellii
ENSDORG00000023443	-	99	78.358	ENSCING00000011342	-	71	78.358	Ciona_intestinalis
ENSDORG00000023443	-	100	79.259	ENSCSAVG00000005904	-	83	79.259	Ciona_savignyi
ENSDORG00000023443	-	100	100.000	ENSCGRG00000013485	-	100	100.000	Cricetulus_griseus_crigri
ENSDORG00000023443	-	100	100.000	ENSFDAG00000019296	-	100	100.000	Fukomys_damarensis
ENSDORG00000023443	-	100	99.259	ENSGAGG00000015899	GFI1	100	99.259	Gopherus_agassizii
ENSDORG00000023443	-	100	96.296	ENSIPUG00000013414	GFI1	56	96.296	Ictalurus_punctatus
ENSDORG00000023443	-	82	81.982	ENSIPUG00000021407	-	52	81.982	Ictalurus_punctatus
ENSDORG00000023443	-	84	100.000	ENSJJAG00000022622	-	100	100.000	Jaculus_jaculus
ENSDORG00000023443	-	100	100.000	ENSMMUG00000005068	GFI1	100	100.000	Macaca_mulatta
ENSDORG00000023443	-	100	100.000	ENSMAUG00000021273	-	100	100.000	Mesocricetus_auratus
ENSDORG00000023443	-	100	100.000	ENSMOCG00000004478	-	100	100.000	Microtus_ochrogaster
ENSDORG00000023443	-	100	95.556	ENSMMOG00000005556	gfi1ab	62	95.556	Mola_mola
ENSDORG00000023443	-	100	100.000	MGP_CAROLIEiJ_G0027508	Gfi1	100	100.000	Mus_caroli
ENSDORG00000023443	-	100	100.000	MGP_PahariEiJ_G0017280	Gfi1	100	100.000	Mus_pahari
ENSDORG00000023443	-	100	100.000	ENSNGAG00000002549	-	100	100.000	Nannospalax_galili
ENSDORG00000023443	-	84	80.531	ENSNBRG00000010351	-	88	80.531	Neolamprologus_brichardi
ENSDORG00000023443	-	84	78.761	ENSNBRG00000001834	-	94	78.761	Neolamprologus_brichardi
ENSDORG00000023443	-	100	100.000	ENSODEG00000006410	-	100	100.000	Octodon_degus
ENSDORG00000023443	-	100	98.519	ENSOANG00000022289	-	72	98.519	Ornithorhynchus_anatinus
ENSDORG00000023443	-	99	88.722	ENSPTIG00000002680	-	99	88.722	Panthera_tigris_altaica
ENSDORG00000023443	-	100	97.778	ENSPMGG00000012546	gfi1ab	73	97.778	Periophthalmus_magnuspinnatus
ENSDORG00000023443	-	100	97.778	ENSPLAG00000010879	gfi1ab	55	97.778	Poecilia_latipinna
ENSDORG00000023443	-	83	82.143	ENSPNYG00000001775	-	88	82.143	Pundamilia_nyererei
ENSDORG00000023443	-	81	82.727	ENSPNAG00000014299	-	54	82.727	Pygocentrus_nattereri
ENSDORG00000023443	-	96	71.756	ENSSLDG00000017614	-	95	71.756	Seriola_lalandi_dorsalis
ENSDORG00000023443	-	100	97.778	ENSSPAG00000009140	gfi1ab	58	97.778	Stegastes_partitus
ENSDORG00000023443	-	100	100.000	ENSTGUG00000006060	GFI1	58	100.000	Taeniopygia_guttata
ENSDORG00000023443	-	100	100.000	ENSUMAG00000011251	-	100	100.000	Ursus_maritimus
ENSDORG00000023443	-	83	92.857	ENSXCOG00000009186	-	90	92.857	Xiphophorus_couchianus
ENSDORG00000023443	-	96	64.667	ENSXMAG00000006527	-	50	64.667	Xiphophorus_maculatus